EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000000389 (Gene tree)
Gene ID: -
Gene Symbol: ino80
Alias: si:ch211-244p18.3
Full Name: INO80 complex subunit
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 35524 bases
Position: chrPEQF01099379.1:1419126-1454649
Accession: 111672657
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000000557	ResIII	PF04851.15	2.4e-08	1	1
ENSSLDP00000000522	ResIII	PF04851.15	1.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000000569	-	6199	XM_023430155	ENSSLDP00000000522	1612 (aa)	XP_023285923	-
ENSSLDT00000000604	-	4686	-	ENSSLDP00000000557	1561 (aa)	-	-

Gene Model

Click here to download ENSSLDG00000000389's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000000389's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000000389	ino80	100	68.605	ENSG00000128908	INO80	93	82.162	Homo_sapiens
ENSSLDG00000000389	ino80	74	85.618	ENSAPOG00000012586	ino80	99	85.198	Acanthochromis_polyacanthus
ENSSLDG00000000389	ino80	91	72.248	ENSAMEG00000016796	INO80	98	71.686	Ailuropoda_melanoleuca
ENSSLDG00000000389	ino80	89	86.428	ENSACIG00000001918	ino80	95	86.422	Amphilophus_citrinellus
ENSSLDG00000000389	ino80	89	89.203	ENSAOCG00000000490	ino80	99	91.755	Amphiprion_ocellaris
ENSSLDG00000000389	ino80	83	94.985	ENSAPEG00000022911	ino80	99	91.818	Amphiprion_percula
ENSSLDG00000000389	ino80	91	88.355	ENSATEG00000001271	ino80	99	91.318	Anabas_testudineus
ENSSLDG00000000389	ino80	93	73.830	ENSAPLG00000013656	INO80	91	73.306	Anas_platyrhynchos
ENSSLDG00000000389	ino80	89	71.804	ENSACAG00000003531	INO80	99	71.994	Anolis_carolinensis
ENSSLDG00000000389	ino80	91	71.919	ENSANAG00000032223	INO80	98	71.136	Aotus_nancymaae
ENSSLDG00000000389	ino80	89	84.295	ENSACLG00000006610	ino80	96	85.405	Astatotilapia_calliptera
ENSSLDG00000000389	ino80	91	72.140	ENSBTAG00000010380	INO80	98	71.402	Bos_taurus
ENSSLDG00000000389	ino80	99	68.570	ENSCJAG00000020770	-	98	71.242	Callithrix_jacchus
ENSSLDG00000000389	ino80	91	72.095	ENSCAFG00000009492	INO80	98	71.544	Canis_familiaris
ENSSLDG00000000389	ino80	68	68.280	ENSCAFG00020005524	-	98	68.186	Canis_lupus_dingo
ENSSLDG00000000389	ino80	91	72.384	ENSCHIG00000010246	INO80	98	71.500	Capra_hircus
ENSSLDG00000000389	ino80	91	72.617	ENSTSYG00000003252	INO80	98	71.838	Carlito_syrichta
ENSSLDG00000000389	ino80	91	72.696	ENSCPOG00000011386	INO80	99	68.831	Cavia_porcellus
ENSSLDG00000000389	ino80	99	68.321	ENSCCAG00000030680	INO80	98	71.180	Cebus_capucinus
ENSSLDG00000000389	ino80	100	68.543	ENSCATG00000040663	INO80	98	71.482	Cercocebus_atys
ENSSLDG00000000389	ino80	90	72.975	ENSCLAG00000008397	INO80	90	72.918	Chinchilla_lanigera
ENSSLDG00000000389	ino80	100	68.792	ENSCSAG00000007632	INO80	98	71.544	Chlorocebus_sabaeus
ENSSLDG00000000389	ino80	59	81.818	ENSCHOG00000011938	INO80	77	76.855	Choloepus_hoffmanni
ENSSLDG00000000389	ino80	93	73.764	ENSCPBG00000013491	INO80	93	72.992	Chrysemys_picta_bellii
ENSSLDG00000000389	ino80	100	64.417	ENSCANG00000036208	INO80	98	67.165	Colobus_angolensis_palliatus
ENSSLDG00000000389	ino80	91	72.598	ENSCGRG00001013566	Ino80	99	68.653	Cricetulus_griseus_chok1gshd
ENSSLDG00000000389	ino80	91	72.598	ENSCGRG00000001290	Ino80	99	68.653	Cricetulus_griseus_crigri
ENSSLDG00000000389	ino80	88	88.762	ENSCSEG00000019370	ino80	96	83.345	Cynoglossus_semilaevis
ENSSLDG00000000389	ino80	82	91.109	ENSCVAG00000021470	ino80	99	86.508	Cyprinodon_variegatus
ENSSLDG00000000389	ino80	91	78.349	ENSDARG00000070432	ino80	98	78.540	Danio_rerio
ENSSLDG00000000389	ino80	91	72.887	ENSDNOG00000010267	INO80	98	72.025	Dasypus_novemcinctus
ENSSLDG00000000389	ino80	58	77.446	ENSEBUG00000001921	ino80	78	77.446	Eptatretus_burgeri
ENSSLDG00000000389	ino80	91	72.316	ENSEASG00005016405	INO80	98	71.562	Equus_asinus_asinus
ENSSLDG00000000389	ino80	88	78.227	ENSELUG00000001071	ino80	94	77.178	Esox_lucius
ENSSLDG00000000389	ino80	91	72.248	ENSFCAG00000014722	INO80	98	71.624	Felis_catus
ENSSLDG00000000389	ino80	90	73.415	ENSFALG00000006125	INO80	91	73.426	Ficedula_albicollis
ENSSLDG00000000389	ino80	91	72.297	ENSFDAG00000005624	INO80	91	72.481	Fukomys_damarensis
ENSSLDG00000000389	ino80	60	87.529	ENSFHEG00000020436	ino80	88	86.839	Fundulus_heteroclitus
ENSSLDG00000000389	ino80	85	79.328	ENSGMOG00000006031	ino80	99	81.520	Gadus_morhua
ENSSLDG00000000389	ino80	91	72.721	ENSGALG00000008553	INO80	91	72.872	Gallus_gallus
ENSSLDG00000000389	ino80	99	84.726	ENSGAFG00000006358	ino80	99	86.347	Gambusia_affinis
ENSSLDG00000000389	ino80	99	85.566	ENSGACG00000012960	ino80	99	87.156	Gasterosteus_aculeatus
ENSSLDG00000000389	ino80	94	73.137	ENSGAGG00000019203	INO80	94	72.891	Gopherus_agassizii
ENSSLDG00000000389	ino80	94	86.412	ENSHBUG00000022614	ino80	96	87.862	Haplochromis_burtoni
ENSSLDG00000000389	ino80	91	72.549	ENSHGLG00000018136	INO80	91	72.601	Heterocephalus_glaber_female
ENSSLDG00000000389	ino80	91	72.481	ENSHGLG00100006571	INO80	91	72.531	Heterocephalus_glaber_male
ENSSLDG00000000389	ino80	89	82.901	ENSHCOG00000002445	ino80	99	83.679	Hippocampus_comes
ENSSLDG00000000389	ino80	94	77.763	ENSIPUG00000018905	ino80	95	79.812	Ictalurus_punctatus
ENSSLDG00000000389	ino80	91	72.635	ENSSTOG00000000427	INO80	91	72.550	Ictidomys_tridecemlineatus
ENSSLDG00000000389	ino80	91	67.434	ENSJJAG00000016166	Ino80	90	67.201	Jaculus_jaculus
ENSSLDG00000000389	ino80	88	89.448	ENSKMAG00000019273	ino80	94	84.065	Kryptolebias_marmoratus
ENSSLDG00000000389	ino80	92	87.500	ENSLBEG00000024288	ino80	95	87.297	Labrus_bergylta
ENSSLDG00000000389	ino80	93	66.535	ENSLACG00000008666	INO80	99	65.695	Latimeria_chalumnae
ENSSLDG00000000389	ino80	90	78.097	ENSLOCG00000012304	ino80	97	78.001	Lepisosteus_oculatus
ENSSLDG00000000389	ino80	99	69.103	ENSLAFG00000009951	INO80	98	71.758	Loxodonta_africana
ENSSLDG00000000389	ino80	100	68.792	ENSMFAG00000044488	INO80	98	71.544	Macaca_fascicularis
ENSSLDG00000000389	ino80	100	68.792	ENSMMUG00000001737	INO80	98	71.544	Macaca_mulatta
ENSSLDG00000000389	ino80	100	68.853	ENSMNEG00000034906	INO80	98	71.606	Macaca_nemestrina
ENSSLDG00000000389	ino80	100	68.792	ENSMLEG00000042117	INO80	98	71.544	Mandrillus_leucophaeus
ENSSLDG00000000389	ino80	69	83.194	ENSMAMG00000013786	ino80	99	82.375	Mastacembelus_armatus
ENSSLDG00000000389	ino80	92	86.784	ENSMZEG00005013146	ino80	96	88.402	Maylandia_zebra
ENSSLDG00000000389	ino80	82	72.973	ENSMGAG00000011164	INO80	99	72.605	Meleagris_gallopavo
ENSSLDG00000000389	ino80	91	71.110	ENSMAUG00000020670	Ino80	90	71.329	Mesocricetus_auratus
ENSSLDG00000000389	ino80	91	72.008	ENSMICG00000005801	INO80	99	70.828	Microcebus_murinus
ENSSLDG00000000389	ino80	91	72.733	ENSMOCG00000016879	Ino80	99	68.826	Microtus_ochrogaster
ENSSLDG00000000389	ino80	71	77.913	ENSMMOG00000015046	ino80	99	80.908	Mola_mola
ENSSLDG00000000389	ino80	99	69.397	ENSMODG00000000184	INO80	98	71.990	Monodelphis_domestica
ENSSLDG00000000389	ino80	88	90.998	ENSMALG00000016488	ino80	99	88.070	Monopterus_albus
ENSSLDG00000000389	ino80	91	70.659	MGP_CAROLIEiJ_G0024144	Ino80	98	70.055	Mus_caroli
ENSSLDG00000000389	ino80	91	72.795	ENSMUSG00000034154	Ino80	98	72.007	Mus_musculus
ENSSLDG00000000389	ino80	91	72.456	MGP_PahariEiJ_G0025587	Ino80	98	71.633	Mus_pahari
ENSSLDG00000000389	ino80	91	72.863	MGP_SPRETEiJ_G0025060	Ino80	98	72.007	Mus_spretus
ENSSLDG00000000389	ino80	91	72.384	ENSMPUG00000008786	INO80	98	71.749	Mustela_putorius_furo
ENSSLDG00000000389	ino80	99	68.980	ENSMLUG00000017764	INO80	98	71.128	Myotis_lucifugus
ENSSLDG00000000389	ino80	91	72.852	ENSNGAG00000019497	Ino80	91	72.222	Nannospalax_galili
ENSSLDG00000000389	ino80	91	80.381	ENSNBRG00000022086	ino80	95	82.016	Neolamprologus_brichardi
ENSSLDG00000000389	ino80	100	67.177	ENSNLEG00000003454	INO80	98	69.770	Nomascus_leucogenys
ENSSLDG00000000389	ino80	68	71.429	ENSOPRG00000000831	INO80	69	69.767	Ochotona_princeps
ENSSLDG00000000389	ino80	91	72.604	ENSODEG00000016734	INO80	90	72.587	Octodon_degus
ENSSLDG00000000389	ino80	91	87.424	ENSONIG00000000772	ino80	99	91.006	Oreochromis_niloticus
ENSSLDG00000000389	ino80	91	72.481	ENSOCUG00000010763	INO80	98	71.900	Oryctolagus_cuniculus
ENSSLDG00000000389	ino80	89	82.033	ENSORLG00000018028	ino80	99	82.924	Oryzias_latipes
ENSSLDG00000000389	ino80	89	82.337	ENSORLG00015012507	ino80	99	83.113	Oryzias_latipes_hsok
ENSSLDG00000000389	ino80	89	82.398	ENSOMEG00000003791	ino80	99	83.512	Oryzias_melastigma
ENSSLDG00000000389	ino80	99	69.165	ENSOGAG00000008998	INO80	98	71.945	Otolemur_garnettii
ENSSLDG00000000389	ino80	93	72.380	ENSOARG00000020323	INO80	98	71.260	Ovis_aries
ENSSLDG00000000389	ino80	100	68.853	ENSPPAG00000042104	INO80	98	71.473	Pan_paniscus
ENSSLDG00000000389	ino80	91	72.248	ENSPPRG00000011011	INO80	98	71.624	Panthera_pardus
ENSSLDG00000000389	ino80	91	71.978	ENSPTIG00000005911	INO80	98	71.375	Panthera_tigris_altaica
ENSSLDG00000000389	ino80	100	68.666	ENSPTRG00000006939	INO80	98	71.473	Pan_troglodytes
ENSSLDG00000000389	ino80	100	68.792	ENSPANG00000019131	INO80	98	71.544	Papio_anubis
ENSSLDG00000000389	ino80	88	77.888	ENSPKIG00000021450	ino80	99	77.354	Paramormyrops_kingsleyae
ENSSLDG00000000389	ino80	91	72.795	ENSPSIG00000014403	INO80	97	72.790	Pelodiscus_sinensis
ENSSLDG00000000389	ino80	71	68.885	ENSPEMG00000013114	-	99	68.539	Peromyscus_maniculatus_bairdii
ENSSLDG00000000389	ino80	99	69.581	ENSPCIG00000027848	INO80	98	72.132	Phascolarctos_cinereus
ENSSLDG00000000389	ino80	99	78.370	ENSPFOG00000013082	ino80	99	85.171	Poecilia_formosa
ENSSLDG00000000389	ino80	57	92.190	ENSPMEG00000021422	ino80	85	85.982	Poecilia_mexicana
ENSSLDG00000000389	ino80	90	91.506	ENSPREG00000013650	ino80	94	86.078	Poecilia_reticulata
ENSSLDG00000000389	ino80	91	70.456	ENSPPYG00000006368	INO80	98	69.843	Pongo_abelii
ENSSLDG00000000389	ino80	91	71.110	ENSPCOG00000022332	INO80	98	70.449	Propithecus_coquereli
ENSSLDG00000000389	ino80	91	70.468	ENSPVAG00000001852	INO80	91	70.112	Pteropus_vampyrus
ENSSLDG00000000389	ino80	92	82.894	ENSPNYG00000002995	ino80	95	84.584	Pundamilia_nyererei
ENSSLDG00000000389	ino80	89	84.566	ENSPNAG00000010386	ino80	94	84.285	Pygocentrus_nattereri
ENSSLDG00000000389	ino80	91	72.252	ENSRNOG00000014483	Ino80	98	71.571	Rattus_norvegicus
ENSSLDG00000000389	ino80	100	68.853	ENSRBIG00000031765	INO80	98	71.544	Rhinopithecus_bieti
ENSSLDG00000000389	ino80	100	68.853	ENSRROG00000033143	INO80	98	71.544	Rhinopithecus_roxellana
ENSSLDG00000000389	ino80	89	74.911	ENSSBOG00000023493	INO80	98	74.855	Saimiri_boliviensis_boliviensis
ENSSLDG00000000389	ino80	99	69.397	ENSSHAG00000016349	INO80	98	71.990	Sarcophilus_harrisii
ENSSLDG00000000389	ino80	88	78.206	ENSSFOG00015000183	ino80	99	78.109	Scleropages_formosus
ENSSLDG00000000389	ino80	83	94.922	ENSSMAG00000007221	ino80	99	92.097	Scophthalmus_maximus
ENSSLDG00000000389	ino80	100	97.395	ENSSDUG00000009957	ino80	100	97.395	Seriola_dumerili
ENSSLDG00000000389	ino80	91	69.548	ENSSARG00000007876	INO80	98	68.886	Sorex_araneus
ENSSLDG00000000389	ino80	87	94.051	ENSSPAG00000007779	ino80	94	94.051	Stegastes_partitus
ENSSLDG00000000389	ino80	91	71.871	ENSSSCG00000004753	INO80	98	71.788	Sus_scrofa
ENSSLDG00000000389	ino80	90	73.056	ENSTGUG00000010786	INO80	91	73.061	Taeniopygia_guttata
ENSSLDG00000000389	ino80	89	84.316	ENSTRUG00000013026	ino80	95	87.018	Takifugu_rubripes
ENSSLDG00000000389	ino80	99	67.690	ENSTTRG00000011479	INO80	98	70.430	Tursiops_truncatus
ENSSLDG00000000389	ino80	71	68.421	ENSUMAG00000012190	-	99	68.325	Ursus_maritimus
ENSSLDG00000000389	ino80	99	63.759	ENSVPAG00000002838	INO80	98	66.313	Vicugna_pacos
ENSSLDG00000000389	ino80	91	72.162	ENSVVUG00000026698	INO80	98	71.669	Vulpes_vulpes
ENSSLDG00000000389	ino80	93	64.053	ENSXETG00000034272	INO80	97	63.912	Xenopus_tropicalis
ENSSLDG00000000389	ino80	94	84.471	ENSXMAG00000006742	ino80	93	85.540	Xiphophorus_maculatus