EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000000417 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 3455 bases
Position: chrPEQF01094156.1:448-3902
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000000418	RRM_1	PF00076.22	1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000000462	-	222	-	ENSSLDP00000000418	73 (aa)	-	-

Gene Model

Click here to download ENSSLDG00000000417's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000000417's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000000417	-	74	90.909	ENSSLDG00000002710	-	90	90.909

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000000417	-	74	92.857	ENSAPOG00000024545	-	88	92.857	Acanthochromis_polyacanthus
ENSSLDG00000000417	-	74	92.857	ENSACIG00000018697	-	82	92.857	Amphilophus_citrinellus
ENSSLDG00000000417	-	84	90.476	ENSACIG00000001537	-	90	90.476	Amphilophus_citrinellus
ENSSLDG00000000417	-	84	95.082	ENSAPEG00000016160	-	90	95.082	Amphiprion_percula
ENSSLDG00000000417	-	90	83.824	ENSATEG00000003493	-	94	83.824	Anabas_testudineus
ENSSLDG00000000417	-	79	80.000	ENSAMXG00000031867	-	87	80.000	Astyanax_mexicanus
ENSSLDG00000000417	-	75	84.211	ENSCHIG00000023999	-	83	84.211	Capra_hircus
ENSSLDG00000000417	-	73	72.727	ENSCHIG00000011877	-	72	72.727	Capra_hircus
ENSSLDG00000000417	-	79	78.333	ENSDARG00000112572	CR293507.1	100	78.333	Danio_rerio
ENSSLDG00000000417	-	79	90.000	ENSFHEG00000000365	-	54	90.000	Fundulus_heteroclitus
ENSSLDG00000000417	-	82	83.871	ENSHCOG00000005897	-	91	83.871	Hippocampus_comes
ENSSLDG00000000417	-	88	86.364	ENSHCOG00000008417	-	76	86.364	Hippocampus_comes
ENSSLDG00000000417	-	75	85.965	ENSIPUG00000023118	-	54	85.965	Ictalurus_punctatus
ENSSLDG00000000417	-	85	85.938	ENSLBEG00000012669	-	97	85.938	Labrus_bergylta
ENSSLDG00000000417	-	85	95.238	ENSMAMG00000007646	-	72	95.238	Mastacembelus_armatus
ENSSLDG00000000417	-	73	81.818	ENSMAMG00000008111	-	83	81.818	Mastacembelus_armatus
ENSSLDG00000000417	-	73	81.818	ENSMAUG00000009812	-	81	81.818	Mesocricetus_auratus
ENSSLDG00000000417	-	88	87.879	ENSMMOG00000013350	-	94	87.879	Mola_mola
ENSSLDG00000000417	-	74	92.857	ENSNBRG00000010616	-	80	92.857	Neolamprologus_brichardi
ENSSLDG00000000417	-	75	78.947	ENSODEG00000000894	-	82	78.947	Octodon_degus
ENSSLDG00000000417	-	79	73.333	ENSODEG00000003118	-	85	73.333	Octodon_degus
ENSSLDG00000000417	-	84	79.365	ENSPKIG00000000613	-	71	79.365	Paramormyrops_kingsleyae
ENSSLDG00000000417	-	88	88.060	ENSPMGG00000023954	-	52	88.060	Periophthalmus_magnuspinnatus
ENSSLDG00000000417	-	88	68.182	ENSPEMG00000021564	-	92	68.182	Peromyscus_maniculatus_bairdii
ENSSLDG00000000417	-	79	78.333	ENSPNAG00000009501	-	91	78.333	Pygocentrus_nattereri
ENSSLDG00000000417	-	89	82.090	ENSSMAG00000018546	-	89	82.090	Scophthalmus_maximus
ENSSLDG00000000417	-	75	81.356	ENSSPUG00000016216	-	88	81.356	Sphenodon_punctatus
ENSSLDG00000000417	-	88	87.879	ENSSPAG00000001821	-	94	87.879	Stegastes_partitus
ENSSLDG00000000417	-	75	94.737	ENSTRUG00000019904	-	78	94.737	Takifugu_rubripes