EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000000425 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: uncharacterized LOC111652410
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 2056 bases
Position: chrPEQF01098455.1:12507-14562
Accession: 111652410
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000000413	PABP	PF00658.18	1e-42	1	3
ENSSLDP00000000413	PABP	PF00658.18	1e-42	2	3
ENSSLDP00000000413	PABP	PF00658.18	1e-42	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000000457	-	648	XM_023402667	ENSSLDP00000000413	215 (aa)	XP_023258435	UPI000C6F712B

Gene Model

Click here to download ENSSLDG00000000425's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000000425's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000000425	-	100	85.514	ENSAPOG00000023881	-	100	85.514	Acanthochromis_polyacanthus
ENSSLDG00000000425	-	100	84.579	ENSAOCG00000019884	-	100	84.579	Amphiprion_ocellaris
ENSSLDG00000000425	-	100	84.579	ENSAPEG00000020987	-	100	84.579	Amphiprion_percula
ENSSLDG00000000425	-	98	88.785	ENSATEG00000013831	-	99	88.785	Anabas_testudineus
ENSSLDG00000000425	-	100	83.796	ENSACLG00000027916	-	100	83.796	Astatotilapia_calliptera
ENSSLDG00000000425	-	99	58.257	ENSAMXG00000041484	-	95	58.796	Astyanax_mexicanus
ENSSLDG00000000425	-	98	78.889	ENSCSEG00000001317	-	97	78.889	Cynoglossus_semilaevis
ENSSLDG00000000425	-	100	78.505	ENSCVAG00000000578	-	99	78.505	Cyprinodon_variegatus
ENSSLDG00000000425	-	99	68.545	ENSELUG00000001731	-	80	68.545	Esox_lucius
ENSSLDG00000000425	-	98	77.830	ENSFHEG00000007741	-	98	77.830	Fundulus_heteroclitus
ENSSLDG00000000425	-	85	74.176	ENSGAFG00000012983	-	67	74.176	Gambusia_affinis
ENSSLDG00000000425	-	100	80.952	ENSHBUG00000000185	-	59	80.952	Haplochromis_burtoni
ENSSLDG00000000425	-	99	69.907	ENSHCOG00000003117	-	100	69.907	Hippocampus_comes
ENSSLDG00000000425	-	98	82.075	ENSKMAG00000011397	-	99	82.075	Kryptolebias_marmoratus
ENSSLDG00000000425	-	100	87.850	ENSLBEG00000027847	-	96	87.850	Labrus_bergylta
ENSSLDG00000000425	-	94	58.647	ENSLOCG00000003085	-	89	57.746	Lepisosteus_oculatus
ENSSLDG00000000425	-	100	90.654	ENSMAMG00000017628	-	100	90.654	Mastacembelus_armatus
ENSSLDG00000000425	-	96	74.176	ENSMMOG00000004490	-	93	74.176	Mola_mola
ENSSLDG00000000425	-	98	87.264	ENSMALG00000004586	-	99	87.264	Monopterus_albus
ENSSLDG00000000425	-	97	82.682	ENSNBRG00000006752	-	76	82.682	Neolamprologus_brichardi
ENSSLDG00000000425	-	94	60.000	ENSPKIG00000005307	-	93	60.849	Paramormyrops_kingsleyae
ENSSLDG00000000425	-	96	66.667	ENSPMGG00000004590	-	100	65.000	Periophthalmus_magnuspinnatus
ENSSLDG00000000425	-	100	80.660	ENSPFOG00000023453	-	100	80.660	Poecilia_formosa
ENSSLDG00000000425	-	99	80.841	ENSPLAG00000003198	-	99	80.841	Poecilia_latipinna
ENSSLDG00000000425	-	97	76.404	ENSPMEG00000022008	-	63	76.404	Poecilia_mexicana
ENSSLDG00000000425	-	100	73.953	ENSPREG00000001981	-	100	72.093	Poecilia_reticulata
ENSSLDG00000000425	-	97	81.065	ENSPNYG00000004740	-	87	81.065	Pundamilia_nyererei
ENSSLDG00000000425	-	85	46.392	ENSPNAG00000018692	-	73	46.392	Pygocentrus_nattereri
ENSSLDG00000000425	-	100	64.623	ENSSFOG00015001322	-	95	64.623	Scleropages_formosus
ENSSLDG00000000425	-	99	83.568	ENSSMAG00000008778	-	99	83.568	Scophthalmus_maximus
ENSSLDG00000000425	-	100	98.140	ENSSDUG00000015116	-	100	98.140	Seriola_dumerili
ENSSLDG00000000425	-	100	86.916	ENSSPAG00000015141	-	100	86.916	Stegastes_partitus
ENSSLDG00000000425	-	99	76.852	ENSTRUG00000021899	-	99	76.852	Takifugu_rubripes
ENSSLDG00000000425	-	99	71.963	ENSTNIG00000002576	-	99	71.963	Tetraodon_nigroviridis
ENSSLDG00000000425	-	100	64.651	ENSXCOG00000001548	-	98	64.186	Xiphophorus_couchianus
ENSSLDG00000000425	-	100	79.167	ENSXMAG00000021863	-	100	79.167	Xiphophorus_maculatus