EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000000442 (Gene tree)
Gene ID: -
Gene Symbol: rnaseh1
Alias: zgc:91971
Full Name: ribonuclease H1
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 7740 bases
Position: chrPEQF01098818.1:14062-21801
Accession: 111656012
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000000556	RNase_H	PF00075.24	2.6e-42	1	1
ENSSLDP00000000512	RNase_H	PF00075.24	3e-42	1	1
ENSSLDP00000000526	RNase_H	PF00075.24	4.1e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000000603	-	798	XM_023407602	ENSSLDP00000000556	265 (aa)	XP_023263370	-
ENSSLDT00000000573	-	966	-	ENSSLDP00000000526	321 (aa)	-	-
ENSSLDT00000000557	-	855	-	ENSSLDP00000000512	284 (aa)	-	-

Gene Model

Click here to download ENSSLDG00000000442's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000000442's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000000442	rnaseh1	93	56.225	ENSG00000171865	RNASEH1	87	53.585	Homo_sapiens
ENSSLDG00000000442	rnaseh1	95	81.423	ENSAPOG00000000412	rnaseh1	84	81.423	Acanthochromis_polyacanthus
ENSSLDG00000000442	rnaseh1	93	56.048	ENSAMEG00000018433	RNASEH1	87	54.789	Ailuropoda_melanoleuca
ENSSLDG00000000442	rnaseh1	95	82.937	ENSACIG00000014666	rnaseh1	84	82.609	Amphilophus_citrinellus
ENSSLDG00000000442	rnaseh1	95	83.399	ENSAOCG00000015210	rnaseh1	84	83.399	Amphiprion_ocellaris
ENSSLDG00000000442	rnaseh1	95	84.190	ENSAPEG00000014104	rnaseh1	85	83.465	Amphiprion_percula
ENSSLDG00000000442	rnaseh1	95	83.794	ENSATEG00000000598	rnaseh1	90	83.071	Anabas_testudineus
ENSSLDG00000000442	rnaseh1	93	52.308	ENSAPLG00000001961	RNASEH1	97	53.012	Anas_platyrhynchos
ENSSLDG00000000442	rnaseh1	94	48.201	ENSACAG00000016857	rnaseh1	95	44.337	Anolis_carolinensis
ENSSLDG00000000442	rnaseh1	93	55.422	ENSANAG00000024055	RNASEH1	87	52.830	Aotus_nancymaae
ENSSLDG00000000442	rnaseh1	95	81.323	ENSACLG00000006741	rnaseh1	88	77.122	Astatotilapia_calliptera
ENSSLDG00000000442	rnaseh1	94	56.800	ENSAMXG00000042940	rnaseh1	90	58.103	Astyanax_mexicanus
ENSSLDG00000000442	rnaseh1	94	54.762	ENSBTAG00000016235	RNASEH1	94	51.460	Bos_taurus
ENSSLDG00000000442	rnaseh1	95	35.573	WBGene00004382	rnh-1.0	99	34.703	Caenorhabditis_elegans
ENSSLDG00000000442	rnaseh1	93	54.150	ENSCJAG00000035450	RNASEH1	87	51.673	Callithrix_jacchus
ENSSLDG00000000442	rnaseh1	93	56.000	ENSCAFG00000003259	RNASEH1	87	54.198	Canis_familiaris
ENSSLDG00000000442	rnaseh1	56	67.785	ENSCAFG00020004994	RNASEH1	96	67.785	Canis_lupus_dingo
ENSSLDG00000000442	rnaseh1	94	55.556	ENSCHIG00000022264	-	92	51.661	Capra_hircus
ENSSLDG00000000442	rnaseh1	92	39.773	ENSCHIG00000022230	-	99	42.169	Capra_hircus
ENSSLDG00000000442	rnaseh1	93	52.756	ENSTSYG00000012926	RNASEH1	86	51.894	Carlito_syrichta
ENSSLDG00000000442	rnaseh1	94	55.556	ENSCAPG00000004813	RNASEH1	99	55.556	Cavia_aperea
ENSSLDG00000000442	rnaseh1	94	55.556	ENSCPOG00000022278	Rnaseh1	85	54.373	Cavia_porcellus
ENSSLDG00000000442	rnaseh1	93	54.545	ENSCCAG00000038017	RNASEH1	87	52.788	Cebus_capucinus
ENSSLDG00000000442	rnaseh1	93	55.823	ENSCATG00000016515	-	92	50.000	Cercocebus_atys
ENSSLDG00000000442	rnaseh1	90	51.867	ENSCATG00000016818	-	91	47.955	Cercocebus_atys
ENSSLDG00000000442	rnaseh1	93	55.422	ENSCLAG00000002440	RNASEH1	87	53.668	Chinchilla_lanigera
ENSSLDG00000000442	rnaseh1	93	55.823	ENSCSAG00000006943	RNASEH1	87	54.510	Chlorocebus_sabaeus
ENSSLDG00000000442	rnaseh1	66	63.636	ENSCHOG00000008547	RNASEH1	74	68.212	Choloepus_hoffmanni
ENSSLDG00000000442	rnaseh1	93	54.724	ENSCPBG00000021620	RNASEH1	96	53.232	Chrysemys_picta_bellii
ENSSLDG00000000442	rnaseh1	99	35.254	ENSCING00000014054	-	98	35.254	Ciona_intestinalis
ENSSLDG00000000442	rnaseh1	78	35.484	ENSCSAVG00000000009	-	88	34.419	Ciona_savignyi
ENSSLDG00000000442	rnaseh1	98	51.943	ENSCANG00000037763	RNASEH1	97	51.418	Colobus_angolensis_palliatus
ENSSLDG00000000442	rnaseh1	93	54.435	ENSCGRG00001008950	Rnaseh1	91	52.143	Cricetulus_griseus_chok1gshd
ENSSLDG00000000442	rnaseh1	93	54.435	ENSCGRG00000006029	Rnaseh1	91	52.143	Cricetulus_griseus_crigri
ENSSLDG00000000442	rnaseh1	95	70.656	ENSCSEG00000005741	rnaseh1	92	70.522	Cynoglossus_semilaevis
ENSSLDG00000000442	rnaseh1	95	76.378	ENSCVAG00000018717	rnaseh1	84	75.591	Cyprinodon_variegatus
ENSSLDG00000000442	rnaseh1	94	66.406	ENSDARG00000042571	rnaseh1	91	66.929	Danio_rerio
ENSSLDG00000000442	rnaseh1	93	57.600	ENSDNOG00000016056	RNASEH1	97	51.736	Dasypus_novemcinctus
ENSSLDG00000000442	rnaseh1	93	54.400	ENSDORG00000000704	Rnaseh1	92	52.347	Dipodomys_ordii
ENSSLDG00000000442	rnaseh1	95	37.500	FBgn0023171	rnh1	96	34.295	Drosophila_melanogaster
ENSSLDG00000000442	rnaseh1	93	54.000	ENSETEG00000012674	RNASEH1	92	48.921	Echinops_telfairi
ENSSLDG00000000442	rnaseh1	94	44.765	ENSEBUG00000008898	rnaseh1	93	44.765	Eptatretus_burgeri
ENSSLDG00000000442	rnaseh1	95	43.359	ENSEBUG00000006116	rnaseh1	95	37.963	Eptatretus_burgeri
ENSSLDG00000000442	rnaseh1	93	58.065	ENSEASG00005022200	RNASEH1	85	55.859	Equus_asinus_asinus
ENSSLDG00000000442	rnaseh1	93	58.065	ENSECAG00000020695	RNASEH1	85	55.859	Equus_caballus
ENSSLDG00000000442	rnaseh1	97	71.429	ENSELUG00000010112	rnaseh1	90	71.429	Esox_lucius
ENSSLDG00000000442	rnaseh1	93	55.242	ENSFCAG00000025832	RNASEH1	97	48.173	Felis_catus
ENSSLDG00000000442	rnaseh1	94	57.358	ENSFALG00000002069	RNASEH1	99	52.159	Ficedula_albicollis
ENSSLDG00000000442	rnaseh1	93	54.618	ENSFDAG00000002035	RNASEH1	84	49.826	Fukomys_damarensis
ENSSLDG00000000442	rnaseh1	94	72.289	ENSGMOG00000013818	rnaseh1	88	68.582	Gadus_morhua
ENSSLDG00000000442	rnaseh1	93	57.364	ENSGALG00000016389	RNASEH1	99	51.034	Gallus_gallus
ENSSLDG00000000442	rnaseh1	95	72.112	ENSGAFG00000001776	rnaseh1	89	69.847	Gambusia_affinis
ENSSLDG00000000442	rnaseh1	94	81.855	ENSGACG00000011935	rnaseh1	84	80.876	Gasterosteus_aculeatus
ENSSLDG00000000442	rnaseh1	93	56.202	ENSGAGG00000009150	RNASEH1	60	54.887	Gopherus_agassizii
ENSSLDG00000000442	rnaseh1	93	56.225	ENSGGOG00000034822	RNASEH1	87	53.585	Gorilla_gorilla
ENSSLDG00000000442	rnaseh1	95	79.845	ENSHBUG00000004666	rnaseh1	83	79.845	Haplochromis_burtoni
ENSSLDG00000000442	rnaseh1	93	54.435	ENSHGLG00000002585	Rnaseh1	83	50.538	Heterocephalus_glaber_female
ENSSLDG00000000442	rnaseh1	93	54.435	ENSHGLG00100005105	Rnaseh1	83	50.538	Heterocephalus_glaber_male
ENSSLDG00000000442	rnaseh1	94	71.765	ENSHCOG00000012329	rnaseh1	83	73.016	Hippocampus_comes
ENSSLDG00000000442	rnaseh1	94	62.151	ENSIPUG00000023060	rnaseh1	90	63.306	Ictalurus_punctatus
ENSSLDG00000000442	rnaseh1	93	54.217	ENSSTOG00000012774	RNASEH1	92	50.725	Ictidomys_tridecemlineatus
ENSSLDG00000000442	rnaseh1	93	52.016	ENSJJAG00000021481	-	90	48.913	Jaculus_jaculus
ENSSLDG00000000442	rnaseh1	85	53.333	ENSJJAG00000020238	Rnaseh1	94	48.450	Jaculus_jaculus
ENSSLDG00000000442	rnaseh1	93	46.371	ENSJJAG00000008994	-	88	44.747	Jaculus_jaculus
ENSSLDG00000000442	rnaseh1	95	76.587	ENSKMAG00000001373	rnaseh1	90	72.059	Kryptolebias_marmoratus
ENSSLDG00000000442	rnaseh1	95	80.709	ENSLBEG00000004480	rnaseh1	90	81.600	Labrus_bergylta
ENSSLDG00000000442	rnaseh1	94	52.809	ENSLACG00000007100	RNASEH1	86	52.688	Latimeria_chalumnae
ENSSLDG00000000442	rnaseh1	95	59.770	ENSLOCG00000017212	rnaseh1	96	58.672	Lepisosteus_oculatus
ENSSLDG00000000442	rnaseh1	93	56.627	ENSLAFG00000015091	RNASEH1	92	52.347	Loxodonta_africana
ENSSLDG00000000442	rnaseh1	93	52.016	ENSMFAG00000002323	-	83	52.016	Macaca_fascicularis
ENSSLDG00000000442	rnaseh1	98	51.943	ENSMFAG00000000063	-	97	51.418	Macaca_fascicularis
ENSSLDG00000000442	rnaseh1	93	51.613	ENSMMUG00000019280	-	87	49.412	Macaca_mulatta
ENSSLDG00000000442	rnaseh1	98	52.297	ENSMNEG00000040183	-	97	51.590	Macaca_nemestrina
ENSSLDG00000000442	rnaseh1	93	52.016	ENSMNEG00000029676	-	87	49.804	Macaca_nemestrina
ENSSLDG00000000442	rnaseh1	93	56.225	ENSMLEG00000039352	-	98	55.422	Mandrillus_leucophaeus
ENSSLDG00000000442	rnaseh1	93	53.629	ENSMLEG00000028662	-	87	51.765	Mandrillus_leucophaeus
ENSSLDG00000000442	rnaseh1	95	81.496	ENSMAMG00000019725	rnaseh1	90	80.784	Mastacembelus_armatus
ENSSLDG00000000442	rnaseh1	95	81.323	ENSMZEG00005013006	rnaseh1	88	77.122	Maylandia_zebra
ENSSLDG00000000442	rnaseh1	89	57.317	ENSMGAG00000013979	RNASEH1	98	57.025	Meleagris_gallopavo
ENSSLDG00000000442	rnaseh1	93	54.435	ENSMAUG00000014957	Rnaseh1	91	51.087	Mesocricetus_auratus
ENSSLDG00000000442	rnaseh1	93	56.800	ENSMICG00000033156	RNASEH1	90	52.857	Microcebus_murinus
ENSSLDG00000000442	rnaseh1	93	55.731	ENSMOCG00000015522	Rnaseh1	94	50.172	Microtus_ochrogaster
ENSSLDG00000000442	rnaseh1	93	78.947	ENSMMOG00000015902	rnaseh1	81	79.918	Mola_mola
ENSSLDG00000000442	rnaseh1	88	49.576	ENSMODG00000028814	-	91	49.787	Monodelphis_domestica
ENSSLDG00000000442	rnaseh1	93	55.242	ENSMODG00000014491	-	90	51.292	Monodelphis_domestica
ENSSLDG00000000442	rnaseh1	95	83.399	ENSMALG00000010565	rnaseh1	93	76.786	Monopterus_albus
ENSSLDG00000000442	rnaseh1	93	56.048	MGP_CAROLIEiJ_G0017660	Rnaseh1	92	52.669	Mus_caroli
ENSSLDG00000000442	rnaseh1	93	56.452	ENSMUSG00000020630	Rnaseh1	92	53.025	Mus_musculus
ENSSLDG00000000442	rnaseh1	93	54.251	MGP_PahariEiJ_G0029418	Rnaseh1	91	52.000	Mus_pahari
ENSSLDG00000000442	rnaseh1	93	56.048	MGP_SPRETEiJ_G0018502	Rnaseh1	92	52.669	Mus_spretus
ENSSLDG00000000442	rnaseh1	56	67.785	ENSMPUG00000012984	RNASEH1	72	67.785	Mustela_putorius_furo
ENSSLDG00000000442	rnaseh1	93	56.400	ENSNGAG00000015966	Rnaseh1	85	51.246	Nannospalax_galili
ENSSLDG00000000442	rnaseh1	95	80.545	ENSNBRG00000008739	rnaseh1	83	80.545	Neolamprologus_brichardi
ENSSLDG00000000442	rnaseh1	93	47.368	ENSNLEG00000015400	RNASEH1	85	45.560	Nomascus_leucogenys
ENSSLDG00000000442	rnaseh1	86	50.655	ENSNLEG00000000059	-	86	49.167	Nomascus_leucogenys
ENSSLDG00000000442	rnaseh1	67	43.820	ENSMEUG00000003610	-	68	41.346	Notamacropus_eugenii
ENSSLDG00000000442	rnaseh1	94	53.200	ENSOPRG00000005072	RNASEH1	92	49.653	Ochotona_princeps
ENSSLDG00000000442	rnaseh1	93	55.823	ENSODEG00000000235	Rnaseh1	84	53.333	Octodon_degus
ENSSLDG00000000442	rnaseh1	95	81.323	ENSONIG00000018697	rnaseh1	97	76.384	Oreochromis_niloticus
ENSSLDG00000000442	rnaseh1	93	55.200	ENSOCUG00000006117	RNASEH1	91	50.542	Oryctolagus_cuniculus
ENSSLDG00000000442	rnaseh1	95	76.772	ENSORLG00000018127	rnaseh1	91	76.078	Oryzias_latipes
ENSSLDG00000000442	rnaseh1	95	76.772	ENSORLG00020013660	rnaseh1	96	69.204	Oryzias_latipes_hni
ENSSLDG00000000442	rnaseh1	95	76.772	ENSORLG00015011338	rnaseh1	96	69.204	Oryzias_latipes_hsok
ENSSLDG00000000442	rnaseh1	85	72.889	ENSOMEG00000004710	rnaseh1	85	73.009	Oryzias_melastigma
ENSSLDG00000000442	rnaseh1	93	53.815	ENSOGAG00000017176	RNASEH1	93	51.071	Otolemur_garnettii
ENSSLDG00000000442	rnaseh1	94	48.659	ENSOARG00000005386	RNASEH1	89	44.649	Ovis_aries
ENSSLDG00000000442	rnaseh1	93	56.225	ENSPPAG00000034221	RNASEH1	87	53.585	Pan_paniscus
ENSSLDG00000000442	rnaseh1	93	55.242	ENSPPRG00000015513	RNASEH1	97	48.173	Panthera_pardus
ENSSLDG00000000442	rnaseh1	93	55.242	ENSPTIG00000019034	RNASEH1	83	54.435	Panthera_tigris_altaica
ENSSLDG00000000442	rnaseh1	86	49.362	ENSPTRG00000043403	-	94	44.610	Pan_troglodytes
ENSSLDG00000000442	rnaseh1	93	56.225	ENSPTRG00000011614	RNASEH1	87	53.585	Pan_troglodytes
ENSSLDG00000000442	rnaseh1	93	56.627	ENSPANG00000000443	RNASEH1	97	56.327	Papio_anubis
ENSSLDG00000000442	rnaseh1	93	49.219	ENSPANG00000018246	-	86	49.020	Papio_anubis
ENSSLDG00000000442	rnaseh1	94	61.328	ENSPKIG00000003146	rnaseh1	98	58.182	Paramormyrops_kingsleyae
ENSSLDG00000000442	rnaseh1	94	54.724	ENSPSIG00000002937	RNASEH1	96	53.053	Pelodiscus_sinensis
ENSSLDG00000000442	rnaseh1	95	65.079	ENSPMGG00000017463	rnaseh1	93	60.949	Periophthalmus_magnuspinnatus
ENSSLDG00000000442	rnaseh1	93	53.846	ENSPEMG00000022465	-	91	51.636	Peromyscus_maniculatus_bairdii
ENSSLDG00000000442	rnaseh1	60	37.037	ENSPCIG00000026047	-	86	36.601	Phascolarctos_cinereus
ENSSLDG00000000442	rnaseh1	93	54.435	ENSPCIG00000023334	-	90	48.387	Phascolarctos_cinereus
ENSSLDG00000000442	rnaseh1	97	71.875	ENSPFOG00000002841	rnaseh1	93	69.343	Poecilia_formosa
ENSSLDG00000000442	rnaseh1	59	60.510	ENSPLAG00000021349	-	65	58.084	Poecilia_latipinna
ENSSLDG00000000442	rnaseh1	95	72.908	ENSPMEG00000016826	rnaseh1	89	70.611	Poecilia_mexicana
ENSSLDG00000000442	rnaseh1	95	71.206	ENSPREG00000012197	rnaseh1	89	69.030	Poecilia_reticulata
ENSSLDG00000000442	rnaseh1	86	50.655	ENSPPYG00000008067	-	88	48.729	Pongo_abelii
ENSSLDG00000000442	rnaseh1	93	46.185	ENSPPYG00000025873	RNASEH1	85	44.528	Pongo_abelii
ENSSLDG00000000442	rnaseh1	94	55.512	ENSPCAG00000002500	RNASEH1	93	50.534	Procavia_capensis
ENSSLDG00000000442	rnaseh1	93	50.800	ENSPCOG00000019444	RNASEH1	89	47.500	Propithecus_coquereli
ENSSLDG00000000442	rnaseh1	94	50.598	ENSPVAG00000002070	RNASEH1	88	50.965	Pteropus_vampyrus
ENSSLDG00000000442	rnaseh1	95	80.156	ENSPNYG00000001292	rnaseh1	88	76.015	Pundamilia_nyererei
ENSSLDG00000000442	rnaseh1	94	64.341	ENSPNAG00000022344	rnaseh1	97	58.020	Pygocentrus_nattereri
ENSSLDG00000000442	rnaseh1	93	55.061	ENSRNOG00000008584	Rnaseh1	91	52.500	Rattus_norvegicus
ENSSLDG00000000442	rnaseh1	98	51.590	ENSRBIG00000034222	RNASEH1	96	49.658	Rhinopithecus_bieti
ENSSLDG00000000442	rnaseh1	98	51.590	ENSRROG00000041761	RNASEH1	96	49.658	Rhinopithecus_roxellana
ENSSLDG00000000442	rnaseh1	93	55.336	ENSSBOG00000025411	RNASEH1	87	52.788	Saimiri_boliviensis_boliviensis
ENSSLDG00000000442	rnaseh1	94	54.762	ENSSHAG00000013051	RNASEH1	91	50.526	Sarcophilus_harrisii
ENSSLDG00000000442	rnaseh1	95	58.566	ENSSFOG00015002709	rnaseh1	91	55.634	Scleropages_formosus
ENSSLDG00000000442	rnaseh1	95	82.213	ENSSMAG00000007586	rnaseh1	84	81.250	Scophthalmus_maximus
ENSSLDG00000000442	rnaseh1	97	95.703	ENSSDUG00000008217	rnaseh1	94	91.760	Seriola_dumerili
ENSSLDG00000000442	rnaseh1	94	49.808	ENSSPUG00000006644	RNASEH1	90	50.189	Sphenodon_punctatus
ENSSLDG00000000442	rnaseh1	95	84.190	ENSSPAG00000009353	rnaseh1	85	83.594	Stegastes_partitus
ENSSLDG00000000442	rnaseh1	94	56.299	ENSSSCG00000025305	RNASEH1	94	53.710	Sus_scrofa
ENSSLDG00000000442	rnaseh1	97	52.189	ENSTGUG00000012980	RNASEH1	98	51.178	Taeniopygia_guttata
ENSSLDG00000000442	rnaseh1	95	74.409	ENSTRUG00000015774	rnaseh1	91	74.409	Takifugu_rubripes
ENSSLDG00000000442	rnaseh1	95	77.559	ENSTNIG00000010715	rnaseh1	91	77.689	Tetraodon_nigroviridis
ENSSLDG00000000442	rnaseh1	94	53.360	ENSTTRG00000001615	RNASEH1	95	49.296	Tursiops_truncatus
ENSSLDG00000000442	rnaseh1	56	67.785	ENSUAMG00000018254	RNASEH1	77	67.785	Ursus_americanus
ENSSLDG00000000442	rnaseh1	75	56.436	ENSUMAG00000003941	RNASEH1	63	55.446	Ursus_maritimus
ENSSLDG00000000442	rnaseh1	94	46.429	ENSVPAG00000011589	RNASEH1	95	45.263	Vicugna_pacos
ENSSLDG00000000442	rnaseh1	93	55.645	ENSVVUG00000008633	RNASEH1	78	52.896	Vulpes_vulpes
ENSSLDG00000000442	rnaseh1	63	49.102	ENSXETG00000030371	-	73	52.349	Xenopus_tropicalis
ENSSLDG00000000442	rnaseh1	93	54.800	ENSXETG00000001212	rnaseh1	84	55.159	Xenopus_tropicalis
ENSSLDG00000000442	rnaseh1	95	72.510	ENSXMAG00000002357	rnaseh1	89	70.229	Xiphophorus_maculatus