EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000000458 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: uncharacterized LOC111651062
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 3754 bases
Position: chrPEQF01097799.1:1652-5405
Accession: 111651062
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000000449	MMR_HSR1	PF01926.23	3.6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000000494	-	3754	XM_023401021	ENSSLDP00000000449	1131 (aa)	XP_023256789	UPI000C6FC03C

Gene Model

Click here to download ENSSLDG00000000458's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000000458's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000000458	-	99	83.700	ENSSLDG00000006728	-	91	83.700
ENSSLDG00000000458	-	89	41.810	ENSSLDG00000002567	-	91	41.810
ENSSLDG00000000458	-	100	79.577	ENSSLDG00000006974	-	91	79.577

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000000458	-	98	43.619	ENSACLG00000023475	-	88	43.452	Astatotilapia_calliptera
ENSSLDG00000000458	-	97	41.212	ENSACLG00000022989	-	91	41.299	Astatotilapia_calliptera
ENSSLDG00000000458	-	98	43.307	ENSACLG00000023483	-	91	43.040	Astatotilapia_calliptera
ENSSLDG00000000458	-	50	49.745	ENSHBUG00000020236	-	95	49.745	Haplochromis_burtoni
ENSSLDG00000000458	-	82	41.195	ENSHBUG00000004854	-	99	41.195	Haplochromis_burtoni
ENSSLDG00000000458	-	98	42.995	ENSLBEG00000019733	-	91	42.661	Labrus_bergylta
ENSSLDG00000000458	-	78	41.932	ENSLBEG00000005517	-	89	41.932	Labrus_bergylta
ENSSLDG00000000458	-	98	52.627	ENSLOCG00000014656	-	90	52.627	Lepisosteus_oculatus
ENSSLDG00000000458	-	98	43.342	ENSMZEG00005020282	-	90	43.178	Maylandia_zebra
ENSSLDG00000000458	-	98	43.531	ENSMZEG00005020277	-	88	43.328	Maylandia_zebra
ENSSLDG00000000458	-	100	91.461	ENSSDUG00000003791	-	91	91.461	Seriola_dumerili