EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000000464 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 3617 bases
Position: chrPEQF01098951.1:76092-79708
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000000456	zf-C2H2	PF00096.26	1.1e-17	1	3
ENSSLDP00000000456	zf-C2H2	PF00096.26	1.1e-17	2	3
ENSSLDP00000000456	zf-C2H2	PF00096.26	1.1e-17	3	3
ENSSLDP00000000456	zf-met	PF12874.7	4.5e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000000501	-	3177	-	ENSSLDP00000000456	351 (aa)	-	-

Gene Model

Click here to download ENSSLDG00000000464's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000000464's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000000464	-	64	32.338	ENSSLDG00000000859	-	81	32.338
ENSSLDG00000000464	-	60	31.343	ENSSLDG00000009821	-	78	31.343
ENSSLDG00000000464	-	57	32.212	ENSSLDG00000013353	prdm5	70	32.212
ENSSLDG00000000464	-	56	40.120	ENSSLDG00000000457	-	76	40.120
ENSSLDG00000000464	-	59	32.110	ENSSLDG00000006724	-	93	32.639
ENSSLDG00000000464	-	66	41.071	ENSSLDG00000016301	-	84	41.071
ENSSLDG00000000464	-	60	41.739	ENSSLDG00000012320	-	96	41.739
ENSSLDG00000000464	-	65	37.391	ENSSLDG00000010190	-	79	37.391
ENSSLDG00000000464	-	63	35.811	ENSSLDG00000005868	-	93	35.811
ENSSLDG00000000464	-	57	37.956	ENSSLDG00000001860	-	76	38.525
ENSSLDG00000000464	-	62	35.204	ENSSLDG00000007524	-	86	35.204
ENSSLDG00000000464	-	53	36.429	ENSSLDG00000002756	-	58	36.429
ENSSLDG00000000464	-	59	32.843	ENSSLDG00000005850	-	95	35.294
ENSSLDG00000000464	-	63	32.353	ENSSLDG00000016454	-	58	32.353
ENSSLDG00000000464	-	58	41.892	ENSSLDG00000014166	znf319b	72	41.892
ENSSLDG00000000464	-	87	31.818	ENSSLDG00000015116	-	74	31.818
ENSSLDG00000000464	-	63	35.484	ENSSLDG00000007756	-	96	35.484
ENSSLDG00000000464	-	66	31.579	ENSSLDG00000001787	zbtb24	83	40.000
ENSSLDG00000000464	-	64	30.102	ENSSLDG00000008645	-	93	30.102
ENSSLDG00000000464	-	55	33.628	ENSSLDG00000020655	-	53	33.628
ENSSLDG00000000464	-	91	35.762	ENSSLDG00000025676	-	85	35.762
ENSSLDG00000000464	-	54	32.692	ENSSLDG00000013170	zbtb17	79	40.506
ENSSLDG00000000464	-	54	39.041	ENSSLDG00000018033	-	57	39.041
ENSSLDG00000000464	-	54	38.235	ENSSLDG00000004098	-	88	38.235
ENSSLDG00000000464	-	56	47.761	ENSSLDG00000020727	-	96	47.761
ENSSLDG00000000464	-	77	34.225	ENSSLDG00000016317	-	94	34.225
ENSSLDG00000000464	-	60	33.696	ENSSLDG00000012133	-	96	32.474
ENSSLDG00000000464	-	64	41.463	ENSSLDG00000006994	-	95	37.681
ENSSLDG00000000464	-	57	31.884	ENSSLDG00000001850	-	52	32.828
ENSSLDG00000000464	-	56	31.053	ENSSLDG00000017718	zbtb48	53	31.053
ENSSLDG00000000464	-	64	30.964	ENSSLDG00000018598	-	91	30.964
ENSSLDG00000000464	-	62	31.395	ENSSLDG00000010390	-	89	31.395
ENSSLDG00000000464	-	64	32.484	ENSSLDG00000018493	-	86	32.484
ENSSLDG00000000464	-	64	33.146	ENSSLDG00000000352	-	80	33.146
ENSSLDG00000000464	-	58	42.353	ENSSLDG00000020675	-	88	41.573
ENSSLDG00000000464	-	88	34.247	ENSSLDG00000020990	-	81	34.247
ENSSLDG00000000464	-	76	30.366	ENSSLDG00000013760	-	97	30.366
ENSSLDG00000000464	-	58	38.060	ENSSLDG00000006288	-	92	35.052
ENSSLDG00000000464	-	56	31.220	ENSSLDG00000020455	-	81	31.220
ENSSLDG00000000464	-	57	31.443	ENSSLDG00000014436	-	76	30.939
ENSSLDG00000000464	-	64	36.471	ENSSLDG00000013823	gfi1b	61	36.471
ENSSLDG00000000464	-	59	40.323	ENSSLDG00000005999	-	51	40.323
ENSSLDG00000000464	-	81	36.029	ENSSLDG00000000203	-	90	40.244
ENSSLDG00000000464	-	53	38.983	ENSSLDG00000000432	-	82	38.983
ENSSLDG00000000464	-	64	38.028	ENSSLDG00000023661	-	91	38.028
ENSSLDG00000000464	-	63	35.811	ENSSLDG00000006217	-	91	35.811
ENSSLDG00000000464	-	58	44.526	ENSSLDG00000000376	-	74	44.526
ENSSLDG00000000464	-	68	35.714	ENSSLDG00000017937	-	97	35.714
ENSSLDG00000000464	-	54	44.595	ENSSLDG00000018273	-	84	31.383
ENSSLDG00000000464	-	56	36.806	ENSSLDG00000002515	-	67	36.806
ENSSLDG00000000464	-	60	32.278	ENSSLDG00000012036	-	91	38.235
ENSSLDG00000000464	-	63	32.105	ENSSLDG00000005839	-	83	32.105
ENSSLDG00000000464	-	60	32.258	ENSSLDG00000020432	-	84	32.258
ENSSLDG00000000464	-	58	43.243	ENSSLDG00000024295	ZNF319	77	43.243
ENSSLDG00000000464	-	55	33.140	ENSSLDG00000005670	-	90	31.214
ENSSLDG00000000464	-	55	40.541	ENSSLDG00000012821	znf236	56	40.541

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000000464	-	54	40.984	ENSAPEG00000019755	-	76	40.984	Amphiprion_percula
ENSSLDG00000000464	-	69	30.894	ENSAPEG00000007889	-	86	30.894	Amphiprion_percula
ENSSLDG00000000464	-	58	34.286	ENSCING00000004861	zf(c2h2)-12	72	34.286	Ciona_intestinalis
ENSSLDG00000000464	-	65	36.842	ENSCING00000005713	-	82	34.667	Ciona_intestinalis
ENSSLDG00000000464	-	73	34.783	ENSCSAVG00000009574	-	99	34.783	Ciona_savignyi
ENSSLDG00000000464	-	61	33.913	ENSCSAVG00000005896	-	70	33.913	Ciona_savignyi
ENSSLDG00000000464	-	55	32.584	ENSCSEG00000005491	-	76	32.584	Cynoglossus_semilaevis
ENSSLDG00000000464	-	64	39.806	ENSCVAG00000002295	-	83	39.806	Cyprinodon_variegatus
ENSSLDG00000000464	-	67	36.066	ENSCVAG00000019574	-	82	36.066	Cyprinodon_variegatus
ENSSLDG00000000464	-	53	32.632	FBgn0033934	CG17385	59	32.632	Drosophila_melanogaster
ENSSLDG00000000464	-	62	31.193	FBgn0030012	CG18262	59	31.193	Drosophila_melanogaster
ENSSLDG00000000464	-	53	30.769	FBgn0028895	CG17328	54	30.769	Drosophila_melanogaster
ENSSLDG00000000464	-	54	36.782	ENSEBUG00000004841	-	80	36.782	Eptatretus_burgeri
ENSSLDG00000000464	-	68	31.720	ENSEBUG00000008392	-	80	31.720	Eptatretus_burgeri
ENSSLDG00000000464	-	56	31.217	ENSEBUG00000000735	-	97	31.217	Eptatretus_burgeri
ENSSLDG00000000464	-	53	35.714	ENSEBUG00000015522	-	67	35.714	Eptatretus_burgeri
ENSSLDG00000000464	-	55	32.558	ENSEBUG00000016914	-	52	32.558	Eptatretus_burgeri
ENSSLDG00000000464	-	57	32.663	ENSELUG00000020794	-	50	32.663	Esox_lucius
ENSSLDG00000000464	-	65	41.000	ENSFHEG00000012990	-	90	41.000	Fundulus_heteroclitus
ENSSLDG00000000464	-	68	37.778	ENSFHEG00000020889	-	75	37.778	Fundulus_heteroclitus
ENSSLDG00000000464	-	69	34.783	ENSFHEG00000013644	-	78	33.014	Fundulus_heteroclitus
ENSSLDG00000000464	-	62	32.086	ENSGACG00000018415	-	99	32.086	Gasterosteus_aculeatus
ENSSLDG00000000464	-	56	32.394	ENSHCOG00000017437	-	58	37.288	Hippocampus_comes
ENSSLDG00000000464	-	68	33.708	ENSHCOG00000014881	-	70	33.708	Hippocampus_comes
ENSSLDG00000000464	-	66	38.272	ENSHCOG00000014887	-	51	38.272	Hippocampus_comes
ENSSLDG00000000464	-	58	33.913	ENSHCOG00000008181	-	68	33.913	Hippocampus_comes
ENSSLDG00000000464	-	54	30.769	ENSIPUG00000013526	-	56	30.769	Ictalurus_punctatus
ENSSLDG00000000464	-	55	39.316	ENSKMAG00000007658	-	79	39.316	Kryptolebias_marmoratus
ENSSLDG00000000464	-	60	33.043	ENSLBEG00000026573	-	68	33.043	Labrus_bergylta
ENSSLDG00000000464	-	66	35.252	ENSONIG00000007812	-	99	35.252	Oreochromis_niloticus
ENSSLDG00000000464	-	64	33.813	ENSONIG00000003224	-	86	33.813	Oreochromis_niloticus
ENSSLDG00000000464	-	64	36.364	ENSONIG00000016416	-	96	36.364	Oreochromis_niloticus
ENSSLDG00000000464	-	58	33.673	ENSONIG00000003471	-	96	36.923	Oreochromis_niloticus
ENSSLDG00000000464	-	54	33.824	ENSONIG00000009894	-	91	33.824	Oreochromis_niloticus
ENSSLDG00000000464	-	54	45.333	ENSORLG00015018254	-	87	45.333	Oryzias_latipes_hsok
ENSSLDG00000000464	-	56	36.000	ENSOMEG00000017673	-	61	36.000	Oryzias_melastigma
ENSSLDG00000000464	-	62	35.246	ENSPMGG00000000458	-	95	31.618	Periophthalmus_magnuspinnatus
ENSSLDG00000000464	-	61	31.443	ENSPMGG00000022524	-	92	36.036	Periophthalmus_magnuspinnatus
ENSSLDG00000000464	-	77	30.808	ENSPMGG00000010664	-	89	30.808	Periophthalmus_magnuspinnatus
ENSSLDG00000000464	-	60	34.821	ENSPMGG00000000243	-	75	33.884	Periophthalmus_magnuspinnatus
ENSSLDG00000000464	-	54	32.584	ENSPMGG00000000218	-	57	32.584	Periophthalmus_magnuspinnatus
ENSSLDG00000000464	-	53	30.570	ENSPMGG00000012289	-	66	30.570	Periophthalmus_magnuspinnatus
ENSSLDG00000000464	-	58	38.636	ENSPMAG00000007983	-	97	38.636	Petromyzon_marinus
ENSSLDG00000000464	-	64	32.683	ENSPFOG00000002879	-	98	32.683	Poecilia_formosa
ENSSLDG00000000464	-	54	34.225	ENSPFOG00000020691	-	86	34.225	Poecilia_formosa
ENSSLDG00000000464	-	79	34.197	ENSPLAG00000006174	-	89	34.197	Poecilia_latipinna
ENSSLDG00000000464	-	55	34.694	ENSPLAG00000011254	-	56	34.694	Poecilia_latipinna
ENSSLDG00000000464	-	62	33.163	ENSPMEG00000022676	-	99	33.163	Poecilia_mexicana
ENSSLDG00000000464	-	55	34.694	ENSPMEG00000007503	-	58	34.694	Poecilia_mexicana
ENSSLDG00000000464	-	58	33.854	ENSPREG00000016204	-	75	31.771	Poecilia_reticulata
ENSSLDG00000000464	-	85	35.000	ENSPREG00000015352	-	84	35.000	Poecilia_reticulata
ENSSLDG00000000464	-	58	43.333	ENSSDUG00000000946	-	96	43.333	Seriola_dumerili
ENSSLDG00000000464	-	55	32.683	ENSTNIG00000008154	-	93	32.683	Tetraodon_nigroviridis
ENSSLDG00000000464	-	53	37.168	ENSXCOG00000005697	-	95	37.168	Xiphophorus_couchianus
ENSSLDG00000000464	-	53	35.374	ENSXMAG00000022242	-	72	35.374	Xiphophorus_maculatus