EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000000521 (Gene tree)
Gene ID: -
Gene Symbol: rrp8
Alias: fk33d07|si:ch211-149e23.3|si:ch211-152b13.1|wu:fk33d07
Full Name: ribosomal RNA processing 8
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 5347 bases
Position: chrPEQF01098716.1:196267-201613
Accession: 111653645
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000000541	Methyltransf_8	PF05148.15	2.2e-89	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000000588	-	2408	XM_023404274	ENSSLDP00000000541	558 (aa)	XP_023260042	UPI000C6F83D2

Gene Model

Click here to download ENSSLDG00000000521's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000000521's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000000521	rrp8	100	72.759	ENSAPOG00000010798	-	98	72.232	Acanthochromis_polyacanthus
ENSSLDG00000000521	rrp8	100	72.759	ENSAPOG00000010806	rrp8	98	72.232	Acanthochromis_polyacanthus
ENSSLDG00000000521	rrp8	100	72.759	ENSAPOG00000008509	-	100	72.232	Acanthochromis_polyacanthus
ENSSLDG00000000521	rrp8	94	65.966	ENSACIG00000019896	rrp8	99	66.348	Amphilophus_citrinellus
ENSSLDG00000000521	rrp8	100	73.111	ENSAOCG00000008785	rrp8	100	72.935	Amphiprion_ocellaris
ENSSLDG00000000521	rrp8	100	73.111	ENSAPEG00000008416	rrp8	100	72.935	Amphiprion_percula
ENSSLDG00000000521	rrp8	93	72.523	ENSATEG00000014110	rrp8	98	72.336	Anabas_testudineus
ENSSLDG00000000521	rrp8	100	65.841	ENSACLG00000002746	rrp8	100	66.018	Astatotilapia_calliptera
ENSSLDG00000000521	rrp8	94	47.201	ENSAMXG00000005164	rrp8	94	47.378	Astyanax_mexicanus
ENSSLDG00000000521	rrp8	58	35.714	ENSCING00000003281	-	87	35.714	Ciona_intestinalis
ENSSLDG00000000521	rrp8	75	40.094	ENSCSAVG00000006435	-	92	39.387	Ciona_savignyi
ENSSLDG00000000521	rrp8	72	64.428	ENSCSEG00000007330	rrp8	100	65.423	Cynoglossus_semilaevis
ENSSLDG00000000521	rrp8	100	61.160	ENSCVAG00000012032	rrp8	100	61.014	Cyprinodon_variegatus
ENSSLDG00000000521	rrp8	100	44.822	ENSDARG00000071652	rrp8	80	72.973	Danio_rerio
ENSSLDG00000000521	rrp8	100	50.669	ENSELUG00000008665	rrp8	100	50.502	Esox_lucius
ENSSLDG00000000521	rrp8	87	54.890	ENSGAFG00000012331	rrp8	99	55.711	Gambusia_affinis
ENSSLDG00000000521	rrp8	77	59.953	ENSGACG00000011343	rrp8	98	59.719	Gasterosteus_aculeatus
ENSSLDG00000000521	rrp8	100	66.018	ENSHBUG00000017131	rrp8	100	65.841	Haplochromis_burtoni
ENSSLDG00000000521	rrp8	100	53.860	ENSHCOG00000001293	rrp8	100	53.509	Hippocampus_comes
ENSSLDG00000000521	rrp8	100	46.004	ENSIPUG00000017733	rrp8	100	46.631	Ictalurus_punctatus
ENSSLDG00000000521	rrp8	100	62.063	ENSKMAG00000009229	rrp8	100	62.413	Kryptolebias_marmoratus
ENSSLDG00000000521	rrp8	70	72.704	ENSLBEG00000019937	rrp8	100	72.388	Labrus_bergylta
ENSSLDG00000000521	rrp8	100	45.660	ENSLOCG00000009591	rrp8	100	45.122	Lepisosteus_oculatus
ENSSLDG00000000521	rrp8	50	49.110	ENSLOCG00000013776	-	89	52.991	Lepisosteus_oculatus
ENSSLDG00000000521	rrp8	100	72.504	ENSMAMG00000009679	rrp8	100	72.154	Mastacembelus_armatus
ENSSLDG00000000521	rrp8	100	65.664	ENSMZEG00005008926	rrp8	100	65.841	Maylandia_zebra
ENSSLDG00000000521	rrp8	94	65.607	ENSMMOG00000015709	rrp8	99	65.421	Mola_mola
ENSSLDG00000000521	rrp8	100	72.077	ENSMALG00000015984	rrp8	100	72.077	Monopterus_albus
ENSSLDG00000000521	rrp8	74	67.866	ENSNBRG00000023416	rrp8	97	68.106	Neolamprologus_brichardi
ENSSLDG00000000521	rrp8	74	62.053	ENSONIG00000016861	rrp8	96	61.611	Oreochromis_niloticus
ENSSLDG00000000521	rrp8	100	61.713	ENSORLG00000004175	rrp8	99	61.713	Oryzias_latipes
ENSSLDG00000000521	rrp8	100	61.189	ENSORLG00020011413	rrp8	99	61.713	Oryzias_latipes_hni
ENSSLDG00000000521	rrp8	100	61.913	ENSORLG00015015410	rrp8	99	62.087	Oryzias_latipes_hsok
ENSSLDG00000000521	rrp8	100	60.967	ENSOMEG00000003161	rrp8	100	61.140	Oryzias_melastigma
ENSSLDG00000000521	rrp8	100	47.676	ENSPKIG00000024217	rrp8	100	47.332	Paramormyrops_kingsleyae
ENSSLDG00000000521	rrp8	100	57.268	ENSPFOG00000007308	rrp8	100	58.144	Poecilia_formosa
ENSSLDG00000000521	rrp8	100	57.968	ENSPLAG00000011349	rrp8	100	58.494	Poecilia_latipinna
ENSSLDG00000000521	rrp8	100	57.443	ENSPMEG00000009888	rrp8	100	58.319	Poecilia_mexicana
ENSSLDG00000000521	rrp8	87	54.941	ENSPREG00000008450	rrp8	99	54.941	Poecilia_reticulata
ENSSLDG00000000521	rrp8	100	65.310	ENSPNYG00000002878	rrp8	100	64.602	Pundamilia_nyererei
ENSSLDG00000000521	rrp8	100	46.048	ENSPNAG00000024779	rrp8	100	46.048	Pygocentrus_nattereri
ENSSLDG00000000521	rrp8	100	48.448	ENSSFOG00015003917	rrp8	99	48.459	Scleropages_formosus
ENSSLDG00000000521	rrp8	100	74.336	ENSSMAG00000004859	rrp8	100	73.982	Scophthalmus_maximus
ENSSLDG00000000521	rrp8	100	95.583	ENSSDUG00000010477	rrp8	100	95.583	Seriola_dumerili
ENSSLDG00000000521	rrp8	70	75.635	ENSSPAG00000006664	rrp8	100	75.248	Stegastes_partitus
ENSSLDG00000000521	rrp8	100	63.652	ENSTRUG00000021812	rrp8	100	63.121	Takifugu_rubripes
ENSSLDG00000000521	rrp8	72	60.349	ENSXCOG00000006156	rrp8	100	61.347	Xiphophorus_couchianus
ENSSLDG00000000521	rrp8	100	57.018	ENSXMAG00000005011	rrp8	100	58.407	Xiphophorus_maculatus