EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000000728 (Gene tree)
Gene ID: -
Gene Symbol: arl5c
Alias: zgc:77751
Full Name: ADP-ribosylation factor-like protein 5B
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 4056 bases
Position: chrPEQF01098922.1:840971-845026
Accession: 111658464
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000000823	MMR_HSR1	PF01926.23	3.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000000884	-	1960	XM_023411012	ENSSLDP00000000823	179 (aa)	XP_023266780	UPI000BBF3868

Gene Model

Click here to download ENSSLDG00000000728's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000000728's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000000728	arl5c	93	46.707	ENSSLDG00000021639	arf2b	92	46.707
ENSSLDG00000000728	arl5c	98	45.455	ENSSLDG00000013951	-	98	45.455
ENSSLDG00000000728	arl5c	89	39.759	ENSSLDG00000012103	-	83	39.759
ENSSLDG00000000728	arl5c	98	69.143	ENSSLDG00000021379	ARL5B	98	69.143
ENSSLDG00000000728	arl5c	99	39.106	ENSSLDG00000017576	arl3	98	39.106
ENSSLDG00000000728	arl5c	89	40.606	ENSSLDG00000015190	arl4aa	85	40.606
ENSSLDG00000000728	arl5c	97	37.640	ENSSLDG00000000746	ARL6	96	37.640
ENSSLDG00000000728	arl5c	98	42.373	ENSSLDG00000017188	arf5	98	42.373
ENSSLDG00000000728	arl5c	83	44.966	ENSSLDG00000009763	arl11	86	44.966
ENSSLDG00000000728	arl5c	94	39.106	ENSSLDG00000020044	arfrp1	89	39.106
ENSSLDG00000000728	arl5c	98	47.159	ENSSLDG00000008504	-	98	47.159
ENSSLDG00000000728	arl5c	98	70.455	ENSSLDG00000012215	arl5a	98	70.455
ENSSLDG00000000728	arl5c	96	39.306	ENSSLDG00000009955	-	95	39.306
ENSSLDG00000000728	arl5c	99	41.573	ENSSLDG00000020097	-	99	41.573
ENSSLDG00000000728	arl5c	92	37.195	ENSSLDG00000003967	arl3l2	85	37.195
ENSSLDG00000000728	arl5c	98	38.191	ENSSLDG00000023797	ARL6	99	38.191
ENSSLDG00000000728	arl5c	98	44.633	ENSSLDG00000005289	-	98	44.633
ENSSLDG00000000728	arl5c	89	41.566	ENSSLDG00000012798	-	90	41.566
ENSSLDG00000000728	arl5c	89	41.916	ENSSLDG00000017889	arl4cb	86	41.916
ENSSLDG00000000728	arl5c	85	41.772	ENSSLDG00000005628	arl4d	79	41.772
ENSSLDG00000000728	arl5c	62	43.750	ENSSLDG00000005491	-	99	43.750
ENSSLDG00000000728	arl5c	50	37.079	ENSSLDG00000025558	sar1ab	64	37.079
ENSSLDG00000000728	arl5c	96	43.275	ENSSLDG00000012946	arl1	94	43.275
ENSSLDG00000000728	arl5c	92	40.000	ENSSLDG00000000124	arl2	97	40.000
ENSSLDG00000000728	arl5c	85	41.875	ENSSLDG00000008208	-	79	41.875
ENSSLDG00000000728	arl5c	88	39.877	ENSSLDG00000006512	-	79	39.877
ENSSLDG00000000728	arl5c	98	44.633	ENSSLDG00000025143	arf3b	98	44.633

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000000728	arl5c	100	86.592	ENSAPOG00000005821	arl5c	100	86.592	Acanthochromis_polyacanthus
ENSSLDG00000000728	arl5c	92	88.415	ENSACIG00000008975	arl5c	91	88.415	Amphilophus_citrinellus
ENSSLDG00000000728	arl5c	100	87.709	ENSAOCG00000010448	arl5c	100	87.709	Amphiprion_ocellaris
ENSSLDG00000000728	arl5c	100	87.709	ENSAPEG00000002699	arl5c	100	87.709	Amphiprion_percula
ENSSLDG00000000728	arl5c	100	84.916	ENSATEG00000000181	arl5c	100	84.916	Anabas_testudineus
ENSSLDG00000000728	arl5c	100	87.709	ENSACLG00000000922	arl5c	100	87.709	Astatotilapia_calliptera
ENSSLDG00000000728	arl5c	100	83.240	ENSAMXG00000031771	arl5c	100	83.240	Astyanax_mexicanus
ENSSLDG00000000728	arl5c	100	86.034	ENSCSEG00000009845	arl5c	100	86.034	Cynoglossus_semilaevis
ENSSLDG00000000728	arl5c	100	86.592	ENSCVAG00000012706	arl5c	100	86.592	Cyprinodon_variegatus
ENSSLDG00000000728	arl5c	100	82.682	ENSDARG00000035719	arl5c	100	82.682	Danio_rerio
ENSSLDG00000000728	arl5c	100	83.799	ENSELUG00000016864	arl5c	100	83.799	Esox_lucius
ENSSLDG00000000728	arl5c	100	87.151	ENSFHEG00000013677	arl5c	100	87.151	Fundulus_heteroclitus
ENSSLDG00000000728	arl5c	100	86.592	ENSGAFG00000002547	arl5c	100	86.592	Gambusia_affinis
ENSSLDG00000000728	arl5c	100	88.268	ENSGACG00000009321	arl5c	100	88.268	Gasterosteus_aculeatus
ENSSLDG00000000728	arl5c	100	87.709	ENSHBUG00000007301	arl5c	100	87.709	Haplochromis_burtoni
ENSSLDG00000000728	arl5c	100	81.564	ENSHCOG00000017576	-	100	81.564	Hippocampus_comes
ENSSLDG00000000728	arl5c	100	82.123	ENSIPUG00000023232	arl5c	100	82.123	Ictalurus_punctatus
ENSSLDG00000000728	arl5c	100	87.151	ENSKMAG00000011323	arl5c	100	87.151	Kryptolebias_marmoratus
ENSSLDG00000000728	arl5c	100	86.592	ENSLBEG00000006177	arl5c	86	86.592	Labrus_bergylta
ENSSLDG00000000728	arl5c	100	88.827	ENSMAMG00000022157	arl5c	100	88.827	Mastacembelus_armatus
ENSSLDG00000000728	arl5c	100	87.709	ENSMZEG00005022925	arl5c	100	87.709	Maylandia_zebra
ENSSLDG00000000728	arl5c	92	90.854	ENSMMOG00000020851	arl5c	96	90.854	Mola_mola
ENSSLDG00000000728	arl5c	92	85.976	ENSMALG00000009306	arl5c	93	85.976	Monopterus_albus
ENSSLDG00000000728	arl5c	100	88.268	ENSNBRG00000020245	arl5c	100	88.268	Neolamprologus_brichardi
ENSSLDG00000000728	arl5c	100	88.268	ENSONIG00000000890	arl5c	99	88.268	Oreochromis_niloticus
ENSSLDG00000000728	arl5c	100	83.240	ENSORLG00000002960	arl5c	100	84.146	Oryzias_latipes
ENSSLDG00000000728	arl5c	100	83.240	ENSORLG00020010074	arl5c	100	84.146	Oryzias_latipes_hni
ENSSLDG00000000728	arl5c	100	83.240	ENSORLG00015002752	arl5c	100	84.146	Oryzias_latipes_hsok
ENSSLDG00000000728	arl5c	97	82.659	ENSOMEG00000021718	arl5c	98	82.659	Oryzias_melastigma
ENSSLDG00000000728	arl5c	100	83.799	ENSPKIG00000021727	arl5c	100	83.799	Paramormyrops_kingsleyae
ENSSLDG00000000728	arl5c	100	87.151	ENSPFOG00000007842	arl5c	99	87.151	Poecilia_formosa
ENSSLDG00000000728	arl5c	100	86.592	ENSPLAG00000002394	arl5c	100	86.592	Poecilia_latipinna
ENSSLDG00000000728	arl5c	91	87.730	ENSPMEG00000000631	arl5c	94	87.730	Poecilia_mexicana
ENSSLDG00000000728	arl5c	100	87.709	ENSPREG00000008730	arl5c	100	87.709	Poecilia_reticulata
ENSSLDG00000000728	arl5c	100	87.709	ENSPNYG00000012720	arl5c	100	87.709	Pundamilia_nyererei
ENSSLDG00000000728	arl5c	100	81.564	ENSPNAG00000002310	arl5c	100	81.564	Pygocentrus_nattereri
ENSSLDG00000000728	arl5c	100	83.240	ENSSFOG00015023529	arl5c	100	83.240	Scleropages_formosus
ENSSLDG00000000728	arl5c	100	89.944	ENSSMAG00000010552	arl5c	100	89.944	Scophthalmus_maximus
ENSSLDG00000000728	arl5c	100	100.000	ENSSDUG00000022640	arl5c	100	100.000	Seriola_dumerili
ENSSLDG00000000728	arl5c	100	88.268	ENSSPAG00000007687	arl5c	100	88.268	Stegastes_partitus
ENSSLDG00000000728	arl5c	100	87.151	ENSTRUG00000022814	arl5c	100	87.151	Takifugu_rubripes
ENSSLDG00000000728	arl5c	100	88.268	ENSTNIG00000003015	arl5c	99	88.268	Tetraodon_nigroviridis
ENSSLDG00000000728	arl5c	100	86.592	ENSXCOG00000017380	arl5c	100	86.592	Xiphophorus_couchianus
ENSSLDG00000000728	arl5c	100	86.034	ENSXMAG00000008447	arl5c	100	86.034	Xiphophorus_maculatus