EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000000800 (Gene tree)
Gene ID: -
Gene Symbol: oscp1a
Alias: oscp1|zgc:171454
Full Name: organic solute carrier partner 1a
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 2081 bases
Position: chrPEQF01097843.1:1105-3185
Accession: ZDB-GENE-080204-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000000897	LSM	PF01423.22	1.5e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000000963	-	366	-	ENSSLDP00000000897	121 (aa)	-	-

Gene Model

Click here to download ENSSLDG00000000800's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000000800's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000000800	oscp1a	61	32.432	ENSSLDG00000011858	snrpd1	82	30.612

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000000800	oscp1a	97	64.103	ENSG00000181817	LSM10	95	64.103	Homo_sapiens
ENSSLDG00000000800	oscp1a	96	65.517	ENSAMEG00000019854	LSM10	94	65.517	Ailuropoda_melanoleuca
ENSSLDG00000000800	oscp1a	98	83.051	ENSACIG00000015420	oscp1a	78	83.051	Amphilophus_citrinellus
ENSSLDG00000000800	oscp1a	100	81.818	ENSAOCG00000015618	LSM10	100	81.818	Amphiprion_ocellaris
ENSSLDG00000000800	oscp1a	84	83.333	ENSAOCG00000015607	LSM10	79	83.333	Amphiprion_ocellaris
ENSSLDG00000000800	oscp1a	100	81.818	ENSAOCG00000014654	-	100	81.818	Amphiprion_ocellaris
ENSSLDG00000000800	oscp1a	84	83.333	ENSAPEG00000021851	LSM10	79	83.333	Amphiprion_percula
ENSSLDG00000000800	oscp1a	100	81.818	ENSAPEG00000021845	-	100	81.818	Amphiprion_percula
ENSSLDG00000000800	oscp1a	93	81.416	ENSATEG00000006310	oscp1a	84	81.416	Anabas_testudineus
ENSSLDG00000000800	oscp1a	98	57.983	ENSACAG00000001231	LSM10	97	57.983	Anolis_carolinensis
ENSSLDG00000000800	oscp1a	98	64.407	ENSANAG00000018759	-	96	64.407	Aotus_nancymaae
ENSSLDG00000000800	oscp1a	98	62.712	ENSANAG00000031489	-	97	62.712	Aotus_nancymaae
ENSSLDG00000000800	oscp1a	100	83.471	ENSACLG00000004728	oscp1a	98	83.471	Astatotilapia_calliptera
ENSSLDG00000000800	oscp1a	100	73.554	ENSAMXG00000025301	oscp1a	100	73.554	Astyanax_mexicanus
ENSSLDG00000000800	oscp1a	98	64.407	ENSBTAG00000024096	LSM10	97	64.407	Bos_taurus
ENSSLDG00000000800	oscp1a	98	64.407	ENSCJAG00000044880	LSM10	96	64.407	Callithrix_jacchus
ENSSLDG00000000800	oscp1a	96	65.517	ENSCAFG00000003382	LSM10	94	65.517	Canis_familiaris
ENSSLDG00000000800	oscp1a	96	65.517	ENSCAFG00020008920	LSM10	94	65.517	Canis_lupus_dingo
ENSSLDG00000000800	oscp1a	98	64.407	ENSCHIG00000009398	LSM10	97	64.407	Capra_hircus
ENSSLDG00000000800	oscp1a	96	66.379	ENSCAPG00000012567	LSM10	94	66.379	Cavia_aperea
ENSSLDG00000000800	oscp1a	96	66.379	ENSCPOG00000039302	LSM10	94	66.379	Cavia_porcellus
ENSSLDG00000000800	oscp1a	98	62.712	ENSCCAG00000008378	-	96	62.712	Cebus_capucinus
ENSSLDG00000000800	oscp1a	98	64.407	ENSCCAG00000018913	-	96	64.407	Cebus_capucinus
ENSSLDG00000000800	oscp1a	97	64.103	ENSCATG00000006589	LSM10	95	64.103	Cercocebus_atys
ENSSLDG00000000800	oscp1a	96	64.655	ENSCLAG00000008633	LSM10	94	64.655	Chinchilla_lanigera
ENSSLDG00000000800	oscp1a	97	64.103	ENSCSAG00000000134	LSM10	95	64.103	Chlorocebus_sabaeus
ENSSLDG00000000800	oscp1a	96	62.712	ENSCHOG00000008615	LSM10	94	62.712	Choloepus_hoffmanni
ENSSLDG00000000800	oscp1a	81	30.612	ENSCSAVG00000001896	-	84	30.612	Ciona_savignyi
ENSSLDG00000000800	oscp1a	97	64.103	ENSCANG00000019928	LSM10	95	64.103	Colobus_angolensis_palliatus
ENSSLDG00000000800	oscp1a	96	65.517	ENSCGRG00001004317	-	95	65.517	Cricetulus_griseus_chok1gshd
ENSSLDG00000000800	oscp1a	88	61.111	ENSCGRG00001022673	-	88	61.111	Cricetulus_griseus_chok1gshd
ENSSLDG00000000800	oscp1a	96	65.517	ENSCGRG00000014935	-	95	65.517	Cricetulus_griseus_crigri
ENSSLDG00000000800	oscp1a	88	61.111	ENSCGRG00000015514	-	88	61.111	Cricetulus_griseus_crigri
ENSSLDG00000000800	oscp1a	98	81.513	ENSCSEG00000010374	oscp1a	80	81.513	Cynoglossus_semilaevis
ENSSLDG00000000800	oscp1a	96	78.448	ENSCVAG00000001536	oscp1a	88	78.448	Cyprinodon_variegatus
ENSSLDG00000000800	oscp1a	67	75.309	ENSDARG00000109563	CABZ01074453.1	94	75.309	Danio_rerio
ENSSLDG00000000800	oscp1a	96	74.138	ENSDARG00000101222	oscp1a	96	74.138	Danio_rerio
ENSSLDG00000000800	oscp1a	97	66.667	ENSDNOG00000036662	LSM10	95	66.667	Dasypus_novemcinctus
ENSSLDG00000000800	oscp1a	96	67.241	ENSDORG00000007579	Lsm10	94	67.241	Dipodomys_ordii
ENSSLDG00000000800	oscp1a	98	67.227	ENSETEG00000005703	LSM10	97	67.227	Echinops_telfairi
ENSSLDG00000000800	oscp1a	94	49.123	ENSEBUG00000001312	oscp1a	93	49.123	Eptatretus_burgeri
ENSSLDG00000000800	oscp1a	96	65.517	ENSEASG00005012194	LSM10	94	65.517	Equus_asinus_asinus
ENSSLDG00000000800	oscp1a	96	65.517	ENSECAG00000005071	LSM10	94	65.517	Equus_caballus
ENSSLDG00000000800	oscp1a	96	64.655	ENSEEUG00000012032	LSM10	94	64.655	Erinaceus_europaeus
ENSSLDG00000000800	oscp1a	96	78.448	ENSELUG00000007452	oscp1a	95	78.448	Esox_lucius
ENSSLDG00000000800	oscp1a	93	63.717	ENSFALG00000000851	LSM10	92	63.717	Ficedula_albicollis
ENSSLDG00000000800	oscp1a	96	65.517	ENSFDAG00000021056	LSM10	94	65.517	Fukomys_damarensis
ENSSLDG00000000800	oscp1a	94	73.043	ENSFHEG00000001058	oscp1a	99	73.043	Fundulus_heteroclitus
ENSSLDG00000000800	oscp1a	95	66.957	ENSGMOG00000019832	oscp1a	97	66.957	Gadus_morhua
ENSSLDG00000000800	oscp1a	95	64.348	ENSGALG00000002127	LSM10	93	64.348	Gallus_gallus
ENSSLDG00000000800	oscp1a	87	65.714	ENSGAFG00000016445	oscp1a	85	65.714	Gambusia_affinis
ENSSLDG00000000800	oscp1a	99	80.833	ENSGACG00000002329	oscp1a	98	80.833	Gasterosteus_aculeatus
ENSSLDG00000000800	oscp1a	94	64.035	ENSGAGG00000024848	LSM10	93	64.035	Gopherus_agassizii
ENSSLDG00000000800	oscp1a	97	64.103	ENSGGOG00000003556	LSM10	95	64.103	Gorilla_gorilla
ENSSLDG00000000800	oscp1a	100	84.298	ENSHBUG00000001722	oscp1a	98	84.298	Haplochromis_burtoni
ENSSLDG00000000800	oscp1a	96	64.655	ENSHGLG00000011625	LSM10	94	64.655	Heterocephalus_glaber_female
ENSSLDG00000000800	oscp1a	96	64.655	ENSHGLG00100001769	LSM10	94	64.655	Heterocephalus_glaber_male
ENSSLDG00000000800	oscp1a	88	69.159	ENSIPUG00000005808	oscp1a	93	69.159	Ictalurus_punctatus
ENSSLDG00000000800	oscp1a	96	65.517	ENSSTOG00000000606	LSM10	94	65.517	Ictidomys_tridecemlineatus
ENSSLDG00000000800	oscp1a	100	77.686	ENSKMAG00000012143	oscp1a	100	77.686	Kryptolebias_marmoratus
ENSSLDG00000000800	oscp1a	94	79.825	ENSLBEG00000017764	oscp1a	93	79.825	Labrus_bergylta
ENSSLDG00000000800	oscp1a	94	64.035	ENSLACG00000015904	LSM10	88	64.035	Latimeria_chalumnae
ENSSLDG00000000800	oscp1a	98	70.339	ENSLOCG00000018277	oscp1a	97	70.339	Lepisosteus_oculatus
ENSSLDG00000000800	oscp1a	97	65.812	ENSLAFG00000009600	LSM10	95	65.812	Loxodonta_africana
ENSSLDG00000000800	oscp1a	97	64.103	ENSMFAG00000009115	LSM10	95	64.103	Macaca_fascicularis
ENSSLDG00000000800	oscp1a	97	64.103	ENSMMUG00000017338	LSM10	95	64.103	Macaca_mulatta
ENSSLDG00000000800	oscp1a	97	64.103	ENSMNEG00000020023	LSM10	95	64.103	Macaca_nemestrina
ENSSLDG00000000800	oscp1a	97	64.103	ENSMLEG00000025150	LSM10	95	64.103	Mandrillus_leucophaeus
ENSSLDG00000000800	oscp1a	98	80.508	ENSMAMG00000004427	oscp1a	97	80.508	Mastacembelus_armatus
ENSSLDG00000000800	oscp1a	100	83.471	ENSMZEG00005026307	oscp1a	98	83.471	Maylandia_zebra
ENSSLDG00000000800	oscp1a	95	62.609	ENSMGAG00000015707	LSM10	93	62.609	Meleagris_gallopavo
ENSSLDG00000000800	oscp1a	96	65.517	ENSMAUG00000016624	Lsm10	95	65.517	Mesocricetus_auratus
ENSSLDG00000000800	oscp1a	96	64.655	ENSMOCG00000021943	Lsm10	95	64.655	Microtus_ochrogaster
ENSSLDG00000000800	oscp1a	94	79.825	ENSMMOG00000013597	oscp1a	85	79.825	Mola_mola
ENSSLDG00000000800	oscp1a	98	68.908	ENSMODG00000023328	LSM10	97	68.908	Monodelphis_domestica
ENSSLDG00000000800	oscp1a	53	82.812	ENSMALG00000012661	oscp1a	50	82.812	Monopterus_albus
ENSSLDG00000000800	oscp1a	96	65.517	MGP_CAROLIEiJ_G0026467	Lsm10	96	68.539	Mus_caroli
ENSSLDG00000000800	oscp1a	96	65.517	ENSMUSG00000050188	Lsm10	96	68.539	Mus_musculus
ENSSLDG00000000800	oscp1a	96	65.517	MGP_PahariEiJ_G0028798	Lsm10	96	68.539	Mus_pahari
ENSSLDG00000000800	oscp1a	96	65.517	MGP_SPRETEiJ_G0027446	Lsm10	96	68.539	Mus_spretus
ENSSLDG00000000800	oscp1a	96	65.517	ENSMPUG00000018593	LSM10	94	65.517	Mustela_putorius_furo
ENSSLDG00000000800	oscp1a	96	64.655	ENSMLUG00000023895	LSM10	94	64.655	Myotis_lucifugus
ENSSLDG00000000800	oscp1a	98	63.559	ENSNGAG00000015011	Lsm10	96	63.559	Nannospalax_galili
ENSSLDG00000000800	oscp1a	99	85.000	ENSNBRG00000014306	oscp1a	98	85.000	Neolamprologus_brichardi
ENSSLDG00000000800	oscp1a	97	64.103	ENSNLEG00000033754	LSM10	95	64.103	Nomascus_leucogenys
ENSSLDG00000000800	oscp1a	96	68.103	ENSMEUG00000006313	LSM10	94	68.103	Notamacropus_eugenii
ENSSLDG00000000800	oscp1a	96	63.793	ENSOPRG00000001699	LSM10	94	63.793	Ochotona_princeps
ENSSLDG00000000800	oscp1a	96	64.655	ENSODEG00000019161	LSM10	94	64.655	Octodon_degus
ENSSLDG00000000800	oscp1a	99	85.000	ENSONIG00000020904	oscp1a	98	85.000	Oreochromis_niloticus
ENSSLDG00000000800	oscp1a	96	66.379	ENSOANG00000002066	LSM10	94	66.379	Ornithorhynchus_anatinus
ENSSLDG00000000800	oscp1a	96	62.931	ENSOCUG00000005333	LSM10	94	62.931	Oryctolagus_cuniculus
ENSSLDG00000000800	oscp1a	100	76.860	ENSORLG00000009504	oscp1a	100	76.860	Oryzias_latipes
ENSSLDG00000000800	oscp1a	100	76.860	ENSORLG00020016201	oscp1a	100	76.860	Oryzias_latipes_hni
ENSSLDG00000000800	oscp1a	100	75.207	ENSORLG00015007794	oscp1a	100	75.207	Oryzias_latipes_hsok
ENSSLDG00000000800	oscp1a	96	66.379	ENSOGAG00000002653	LSM10	94	66.379	Otolemur_garnettii
ENSSLDG00000000800	oscp1a	98	64.407	ENSOARG00000009596	LSM10	97	64.407	Ovis_aries
ENSSLDG00000000800	oscp1a	97	64.103	ENSPPAG00000023465	LSM10	95	64.103	Pan_paniscus
ENSSLDG00000000800	oscp1a	96	65.517	ENSPPRG00000014619	LSM10	94	65.517	Panthera_pardus
ENSSLDG00000000800	oscp1a	96	65.517	ENSPTIG00000004613	LSM10	94	65.517	Panthera_tigris_altaica
ENSSLDG00000000800	oscp1a	97	64.103	ENSPTRG00000000539	LSM10	95	64.103	Pan_troglodytes
ENSSLDG00000000800	oscp1a	97	64.103	ENSPANG00000023172	LSM10	95	64.103	Papio_anubis
ENSSLDG00000000800	oscp1a	96	69.828	ENSPKIG00000003728	oscp1a	94	69.828	Paramormyrops_kingsleyae
ENSSLDG00000000800	oscp1a	94	63.158	ENSPSIG00000000590	LSM10	93	63.158	Pelodiscus_sinensis
ENSSLDG00000000800	oscp1a	61	70.270	ENSPMGG00000015718	oscp1a	96	70.270	Periophthalmus_magnuspinnatus
ENSSLDG00000000800	oscp1a	82	71.717	ENSPCIG00000014865	LSM10	73	71.717	Phascolarctos_cinereus
ENSSLDG00000000800	oscp1a	94	68.421	ENSPFOG00000020490	oscp1a	97	68.421	Poecilia_formosa
ENSSLDG00000000800	oscp1a	97	67.521	ENSPLAG00000016537	oscp1a	89	67.521	Poecilia_latipinna
ENSSLDG00000000800	oscp1a	93	68.142	ENSPMEG00000000174	oscp1a	98	68.142	Poecilia_mexicana
ENSSLDG00000000800	oscp1a	97	68.376	ENSPREG00000009899	oscp1a	89	68.376	Poecilia_reticulata
ENSSLDG00000000800	oscp1a	97	64.103	ENSPPYG00000001539	LSM10	95	64.103	Pongo_abelii
ENSSLDG00000000800	oscp1a	98	64.407	ENSPCAG00000002520	LSM10	97	64.407	Procavia_capensis
ENSSLDG00000000800	oscp1a	96	65.517	ENSPVAG00000008644	LSM10	94	65.517	Pteropus_vampyrus
ENSSLDG00000000800	oscp1a	100	84.298	ENSPNYG00000003138	oscp1a	98	84.298	Pundamilia_nyererei
ENSSLDG00000000800	oscp1a	100	77.686	ENSPNAG00000028829	oscp1a	100	77.686	Pygocentrus_nattereri
ENSSLDG00000000800	oscp1a	96	64.655	ENSRNOG00000025716	Lsm10	95	64.655	Rattus_norvegicus
ENSSLDG00000000800	oscp1a	97	64.103	ENSRBIG00000001561	LSM10	95	64.103	Rhinopithecus_bieti
ENSSLDG00000000800	oscp1a	97	64.103	ENSRROG00000011414	LSM10	95	64.103	Rhinopithecus_roxellana
ENSSLDG00000000800	oscp1a	98	64.407	ENSSBOG00000036413	-	96	64.407	Saimiri_boliviensis_boliviensis
ENSSLDG00000000800	oscp1a	96	68.103	ENSSHAG00000018056	LSM10	94	68.103	Sarcophilus_harrisii
ENSSLDG00000000800	oscp1a	96	71.552	ENSSFOG00015019954	lsm10	95	71.552	Scleropages_formosus
ENSSLDG00000000800	oscp1a	97	84.615	ENSSMAG00000001297	oscp1a	100	84.615	Scophthalmus_maximus
ENSSLDG00000000800	oscp1a	100	97.521	ENSSDUG00000007090	oscp1a	98	97.521	Seriola_dumerili
ENSSLDG00000000800	oscp1a	85	67.961	ENSSARG00000004211	LSM10	94	64.407	Sorex_araneus
ENSSLDG00000000800	oscp1a	100	80.165	ENSSPAG00000009229	oscp1a	100	80.165	Stegastes_partitus
ENSSLDG00000000800	oscp1a	98	64.407	ENSSSCG00000038916	LSM10	96	64.407	Sus_scrofa
ENSSLDG00000000800	oscp1a	94	64.912	ENSTGUG00000001602	-	93	64.912	Taeniopygia_guttata
ENSSLDG00000000800	oscp1a	94	64.035	ENSTGUG00000001600	-	93	64.035	Taeniopygia_guttata
ENSSLDG00000000800	oscp1a	95	79.130	ENSTRUG00000010531	oscp1a	93	79.130	Takifugu_rubripes
ENSSLDG00000000800	oscp1a	98	63.559	ENSTBEG00000016674	LSM10	96	63.559	Tupaia_belangeri
ENSSLDG00000000800	oscp1a	96	65.517	ENSUAMG00000020265	LSM10	94	65.517	Ursus_americanus
ENSSLDG00000000800	oscp1a	96	65.517	ENSUMAG00000001438	LSM10	53	65.517	Ursus_maritimus
ENSSLDG00000000800	oscp1a	96	65.517	ENSVVUG00000023209	LSM10	94	65.517	Vulpes_vulpes
ENSSLDG00000000800	oscp1a	96	61.207	ENSXETG00000027631	lsm10	94	61.207	Xenopus_tropicalis
ENSSLDG00000000800	oscp1a	97	66.667	ENSXCOG00000018776	oscp1a	74	66.667	Xiphophorus_couchianus
ENSSLDG00000000800	oscp1a	91	68.182	ENSXMAG00000019963	oscp1a	88	68.182	Xiphophorus_maculatus