EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000000877 (Gene tree)
Gene ID: -
Gene Symbol: zgc:162879
Alias: -
Full Name: ras and EF-hand domain-containing protein-like
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 13782 bases
Position: chrPEQF01099161.1:2722978-2736759
Accession: 111666867
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000001070	MMR_HSR1	PF01926.23	4.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000001139	-	5501	XM_023422366	ENSSLDP00000001070	664 (aa)	XP_023278134	UPI000C6F8EE7

Gene Model

Click here to download ENSSLDG00000000877's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000000877's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000000877	zgc:162879	99	44.615	ENSSLDG00000001784	rasef	90	44.615

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000000877	zgc:162879	99	85.736	ENSAPOG00000008539	zgc:162879	99	85.736	Acanthochromis_polyacanthus
ENSSLDG00000000877	zgc:162879	100	86.617	ENSACIG00000023717	zgc:162879	100	86.617	Amphilophus_citrinellus
ENSSLDG00000000877	zgc:162879	84	83.750	ENSAOCG00000006210	zgc:162879	87	83.750	Amphiprion_ocellaris
ENSSLDG00000000877	zgc:162879	99	86.646	ENSAPEG00000017489	zgc:162879	99	86.646	Amphiprion_percula
ENSSLDG00000000877	zgc:162879	100	90.964	ENSATEG00000006102	zgc:162879	100	90.964	Anabas_testudineus
ENSSLDG00000000877	zgc:162879	100	84.187	ENSACLG00000021066	zgc:162879	100	82.556	Astatotilapia_calliptera
ENSSLDG00000000877	zgc:162879	99	64.776	ENSAMXG00000007430	zgc:162879	99	64.776	Astyanax_mexicanus
ENSSLDG00000000877	zgc:162879	84	65.954	ENSCSEG00000013699	zgc:162879	91	65.954	Cynoglossus_semilaevis
ENSSLDG00000000877	zgc:162879	99	76.586	ENSCVAG00000014510	zgc:162879	99	76.586	Cyprinodon_variegatus
ENSSLDG00000000877	zgc:162879	99	63.554	ENSDARG00000074163	zgc:162879	99	63.554	Danio_rerio
ENSSLDG00000000877	zgc:162879	91	67.049	ENSELUG00000019483	zgc:162879	98	67.049	Esox_lucius
ENSSLDG00000000877	zgc:162879	76	73.810	ENSFHEG00000022549	zgc:162879	99	73.810	Fundulus_heteroclitus
ENSSLDG00000000877	zgc:162879	100	75.301	ENSGAFG00000001313	zgc:162879	100	75.301	Gambusia_affinis
ENSSLDG00000000877	zgc:162879	100	79.365	ENSGACG00000010798	zgc:162879	99	79.365	Gasterosteus_aculeatus
ENSSLDG00000000877	zgc:162879	100	84.211	ENSHBUG00000016335	zgc:162879	100	84.211	Haplochromis_burtoni
ENSSLDG00000000877	zgc:162879	91	59.672	ENSHCOG00000012026	zgc:162879	99	60.000	Hippocampus_comes
ENSSLDG00000000877	zgc:162879	100	70.075	ENSKMAG00000016246	zgc:162879	100	70.526	Kryptolebias_marmoratus
ENSSLDG00000000877	zgc:162879	99	81.928	ENSLBEG00000006690	zgc:162879	100	81.928	Labrus_bergylta
ENSSLDG00000000877	zgc:162879	99	43.570	ENSLACG00000014082	-	99	43.553	Latimeria_chalumnae
ENSSLDG00000000877	zgc:162879	99	61.367	ENSLOCG00000014347	zgc:162879	98	61.367	Lepisosteus_oculatus
ENSSLDG00000000877	zgc:162879	100	84.187	ENSMAMG00000008875	zgc:162879	100	84.187	Mastacembelus_armatus
ENSSLDG00000000877	zgc:162879	100	84.036	ENSMZEG00005022256	zgc:162879	100	84.036	Maylandia_zebra
ENSSLDG00000000877	zgc:162879	100	75.489	ENSNBRG00000020110	zgc:162879	100	75.489	Neolamprologus_brichardi
ENSSLDG00000000877	zgc:162879	99	80.714	ENSONIG00000015165	zgc:162879	100	80.714	Oreochromis_niloticus
ENSSLDG00000000877	zgc:162879	99	70.783	ENSORLG00015017960	zgc:162879	99	70.783	Oryzias_latipes_hsok
ENSSLDG00000000877	zgc:162879	99	57.100	ENSPKIG00000020661	zgc:162879	99	59.517	Paramormyrops_kingsleyae
ENSSLDG00000000877	zgc:162879	100	74.247	ENSPFOG00000006354	zgc:162879	99	74.247	Poecilia_formosa
ENSSLDG00000000877	zgc:162879	100	74.398	ENSPLAG00000020643	zgc:162879	99	74.398	Poecilia_latipinna
ENSSLDG00000000877	zgc:162879	100	73.946	ENSPMEG00000014713	zgc:162879	100	73.946	Poecilia_mexicana
ENSSLDG00000000877	zgc:162879	100	76.692	ENSPNYG00000010530	zgc:162879	100	76.692	Pundamilia_nyererei
ENSSLDG00000000877	zgc:162879	99	63.636	ENSPNAG00000012022	zgc:162879	99	63.636	Pygocentrus_nattereri
ENSSLDG00000000877	zgc:162879	85	51.384	ENSSFOG00015023774	zgc:162879	91	51.384	Scleropages_formosus
ENSSLDG00000000877	zgc:162879	100	85.542	ENSSMAG00000001513	zgc:162879	99	85.873	Scophthalmus_maximus
ENSSLDG00000000877	zgc:162879	100	99.398	ENSSDUG00000011478	zgc:162879	100	99.398	Seriola_dumerili
ENSSLDG00000000877	zgc:162879	99	78.756	ENSSPAG00000010598	zgc:162879	99	78.756	Stegastes_partitus
ENSSLDG00000000877	zgc:162879	99	73.295	ENSTNIG00000019239	zgc:162879	99	73.295	Tetraodon_nigroviridis
ENSSLDG00000000877	zgc:162879	99	43.611	ENSXETG00000015491	rasef	98	43.611	Xenopus_tropicalis
ENSSLDG00000000877	zgc:162879	77	69.548	ENSXCOG00000020244	zgc:162879	100	69.548	Xiphophorus_couchianus
ENSSLDG00000000877	zgc:162879	100	75.904	ENSXMAG00000002846	zgc:162879	100	75.904	Xiphophorus_maculatus