EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000000937 (Gene tree)
Gene ID: -
Gene Symbol: clp1
Alias: fa28a12|wu:fa28a12
Full Name: cleavage and polyadenylation factor I subunit 1
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 7650 bases
Position: chrPEQF01099048.1:708231-715880
Accession: 111662733
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000001098	Clp1	PF06807.14	2.7e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000001170	-	4921	XM_023416691	ENSSLDP00000001098	441 (aa)	XP_023272459	UPI000C6FAB4F

Gene Model

Click here to download ENSSLDG00000000937's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000000937's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000000937	clp1	99	76.092	ENSG00000172409	CLP1	98	77.594	Homo_sapiens
ENSSLDG00000000937	clp1	100	97.279	ENSAPOG00000008242	clp1	100	97.279	Acanthochromis_polyacanthus
ENSSLDG00000000937	clp1	99	75.862	ENSAMEG00000014551	CLP1	99	75.862	Ailuropoda_melanoleuca
ENSSLDG00000000937	clp1	100	97.052	ENSACIG00000006310	clp1	99	97.052	Amphilophus_citrinellus
ENSSLDG00000000937	clp1	100	97.732	ENSAOCG00000010681	clp1	100	97.732	Amphiprion_ocellaris
ENSSLDG00000000937	clp1	100	97.732	ENSAPEG00000012165	clp1	100	97.732	Amphiprion_percula
ENSSLDG00000000937	clp1	100	98.186	ENSATEG00000012374	clp1	100	98.186	Anabas_testudineus
ENSSLDG00000000937	clp1	98	75.694	ENSACAG00000007139	CLP1	99	75.694	Anolis_carolinensis
ENSSLDG00000000937	clp1	99	76.092	ENSANAG00000034935	CLP1	98	77.594	Aotus_nancymaae
ENSSLDG00000000937	clp1	100	96.825	ENSACLG00000013573	clp1	100	96.825	Astatotilapia_calliptera
ENSSLDG00000000937	clp1	95	87.972	ENSAMXG00000014194	clp1	98	87.972	Astyanax_mexicanus
ENSSLDG00000000937	clp1	96	77.123	ENSBTAG00000006493	CLP1	98	77.123	Bos_taurus
ENSSLDG00000000937	clp1	95	47.518	WBGene00010304	clpf-1	97	47.518	Caenorhabditis_elegans
ENSSLDG00000000937	clp1	99	76.092	ENSCJAG00000008748	CLP1	98	77.594	Callithrix_jacchus
ENSSLDG00000000937	clp1	96	77.123	ENSCAFG00000007815	CLP1	98	77.123	Canis_familiaris
ENSSLDG00000000937	clp1	96	77.123	ENSCAFG00020000903	CLP1	98	77.123	Canis_lupus_dingo
ENSSLDG00000000937	clp1	99	75.862	ENSCHIG00000023497	CLP1	99	75.862	Capra_hircus
ENSSLDG00000000937	clp1	99	76.092	ENSTSYG00000006824	CLP1	99	76.092	Carlito_syrichta
ENSSLDG00000000937	clp1	99	75.862	ENSCAPG00000009703	CLP1	99	75.862	Cavia_aperea
ENSSLDG00000000937	clp1	96	77.358	ENSCPOG00000012554	CLP1	99	77.358	Cavia_porcellus
ENSSLDG00000000937	clp1	99	76.092	ENSCCAG00000031957	CLP1	99	76.092	Cebus_capucinus
ENSSLDG00000000937	clp1	100	75.057	ENSCATG00000044628	CLP1	98	77.594	Cercocebus_atys
ENSSLDG00000000937	clp1	96	77.358	ENSCLAG00000004094	CLP1	98	77.358	Chinchilla_lanigera
ENSSLDG00000000937	clp1	96	77.594	ENSCSAG00000005994	CLP1	98	77.594	Chlorocebus_sabaeus
ENSSLDG00000000937	clp1	98	75.463	ENSCPBG00000016843	CLP1	99	75.463	Chrysemys_picta_bellii
ENSSLDG00000000937	clp1	96	61.939	ENSCING00000003779	-	97	61.939	Ciona_intestinalis
ENSSLDG00000000937	clp1	95	63.158	ENSCSAVG00000003437	-	96	63.158	Ciona_savignyi
ENSSLDG00000000937	clp1	99	76.092	ENSCANG00000034335	CLP1	98	77.594	Colobus_angolensis_palliatus
ENSSLDG00000000937	clp1	98	75.926	ENSCGRG00001002227	CLP1	99	75.926	Cricetulus_griseus_chok1gshd
ENSSLDG00000000937	clp1	98	75.926	ENSCGRG00000004328	CLP1	99	75.926	Cricetulus_griseus_crigri
ENSSLDG00000000937	clp1	100	94.104	ENSCSEG00000008614	clp1	100	94.104	Cynoglossus_semilaevis
ENSSLDG00000000937	clp1	100	95.011	ENSCVAG00000020101	clp1	100	95.011	Cyprinodon_variegatus
ENSSLDG00000000937	clp1	100	84.081	ENSDARG00000063663	clp1	100	84.529	Danio_rerio
ENSSLDG00000000937	clp1	98	75.751	ENSDNOG00000042415	CLP1	90	75.751	Dasypus_novemcinctus
ENSSLDG00000000937	clp1	96	77.123	ENSDORG00000014685	Clp1	98	77.123	Dipodomys_ordii
ENSSLDG00000000937	clp1	95	54.785	FBgn0033842	cbc	97	54.785	Drosophila_melanogaster
ENSSLDG00000000937	clp1	96	77.358	ENSETEG00000003009	CLP1	98	77.358	Echinops_telfairi
ENSSLDG00000000937	clp1	97	65.340	ENSEBUG00000011648	clp1	99	65.340	Eptatretus_burgeri
ENSSLDG00000000937	clp1	99	76.322	ENSEASG00005002093	CLP1	99	76.322	Equus_asinus_asinus
ENSSLDG00000000937	clp1	99	76.322	ENSECAG00000011597	CLP1	99	76.322	Equus_caballus
ENSSLDG00000000937	clp1	96	76.887	ENSEEUG00000012771	CLP1	98	76.887	Erinaceus_europaeus
ENSSLDG00000000937	clp1	100	86.771	ENSELUG00000024048	clp1	100	86.771	Esox_lucius
ENSSLDG00000000937	clp1	99	75.862	ENSFCAG00000006633	CLP1	99	75.862	Felis_catus
ENSSLDG00000000937	clp1	96	76.887	ENSFALG00000011145	CLP1	98	76.887	Ficedula_albicollis
ENSSLDG00000000937	clp1	96	77.358	ENSFDAG00000000234	CLP1	98	77.358	Fukomys_damarensis
ENSSLDG00000000937	clp1	100	95.238	ENSFHEG00000014760	CLP1	100	95.238	Fundulus_heteroclitus
ENSSLDG00000000937	clp1	100	90.249	ENSGMOG00000019340	clp1	100	90.249	Gadus_morhua
ENSSLDG00000000937	clp1	96	76.651	ENSGALG00000007370	CLP1	98	76.651	Gallus_gallus
ENSSLDG00000000937	clp1	100	94.104	ENSGAFG00000003020	clp1	100	94.104	Gambusia_affinis
ENSSLDG00000000937	clp1	100	96.825	ENSGACG00000017832	clp1	100	96.825	Gasterosteus_aculeatus
ENSSLDG00000000937	clp1	98	75.463	ENSGAGG00000013279	CLP1	99	75.463	Gopherus_agassizii
ENSSLDG00000000937	clp1	99	76.092	ENSGGOG00000023006	CLP1	98	77.594	Gorilla_gorilla
ENSSLDG00000000937	clp1	100	97.052	ENSHBUG00000010436	clp1	100	97.052	Haplochromis_burtoni
ENSSLDG00000000937	clp1	96	77.358	ENSHGLG00000009914	CLP1	98	77.358	Heterocephalus_glaber_female
ENSSLDG00000000937	clp1	96	77.358	ENSHGLG00100006105	CLP1	98	77.358	Heterocephalus_glaber_male
ENSSLDG00000000937	clp1	100	95.692	ENSHCOG00000010072	clp1	100	95.692	Hippocampus_comes
ENSSLDG00000000937	clp1	100	84.187	ENSIPUG00000016238	clp1	99	84.187	Ictalurus_punctatus
ENSSLDG00000000937	clp1	96	77.358	ENSSTOG00000029257	CLP1	98	77.358	Ictidomys_tridecemlineatus
ENSSLDG00000000937	clp1	96	76.887	ENSJJAG00000023691	Clp1	98	76.887	Jaculus_jaculus
ENSSLDG00000000937	clp1	100	94.558	ENSKMAG00000011990	clp1	100	94.558	Kryptolebias_marmoratus
ENSSLDG00000000937	clp1	100	97.279	ENSLBEG00000010201	clp1	100	97.279	Labrus_bergylta
ENSSLDG00000000937	clp1	97	75.352	ENSLACG00000003160	CLP1	99	75.352	Latimeria_chalumnae
ENSSLDG00000000937	clp1	71	86.957	ENSLOCG00000008074	clp1	100	87.346	Lepisosteus_oculatus
ENSSLDG00000000937	clp1	96	77.123	ENSLAFG00000014907	CLP1	98	77.123	Loxodonta_africana
ENSSLDG00000000937	clp1	99	76.092	ENSMFAG00000046074	CLP1	98	77.594	Macaca_fascicularis
ENSSLDG00000000937	clp1	99	76.092	ENSMMUG00000038007	CLP1	99	76.092	Macaca_mulatta
ENSSLDG00000000937	clp1	96	77.594	ENSMNEG00000000259	CLP1	98	77.594	Macaca_nemestrina
ENSSLDG00000000937	clp1	99	76.092	ENSMLEG00000043556	CLP1	98	77.594	Mandrillus_leucophaeus
ENSSLDG00000000937	clp1	100	97.506	ENSMAMG00000002149	clp1	100	97.506	Mastacembelus_armatus
ENSSLDG00000000937	clp1	100	96.825	ENSMZEG00005002850	clp1	100	96.825	Maylandia_zebra
ENSSLDG00000000937	clp1	96	76.651	ENSMGAG00000009643	CLP1	98	76.651	Meleagris_gallopavo
ENSSLDG00000000937	clp1	98	75.463	ENSMAUG00000016261	Clp1	99	75.463	Mesocricetus_auratus
ENSSLDG00000000937	clp1	99	75.399	ENSMICG00000004895	CLP1	98	77.123	Microcebus_murinus
ENSSLDG00000000937	clp1	98	76.157	ENSMOCG00000005498	Clp1	99	76.157	Microtus_ochrogaster
ENSSLDG00000000937	clp1	100	95.011	ENSMMOG00000003229	clp1	100	95.011	Mola_mola
ENSSLDG00000000937	clp1	99	76.092	ENSMODG00000024148	-	99	76.092	Monodelphis_domestica
ENSSLDG00000000937	clp1	99	76.092	ENSMODG00000020107	-	99	76.092	Monodelphis_domestica
ENSSLDG00000000937	clp1	100	96.372	ENSMALG00000014239	clp1	100	96.372	Monopterus_albus
ENSSLDG00000000937	clp1	98	75.926	MGP_CAROLIEiJ_G0023726	Clp1	99	75.926	Mus_caroli
ENSSLDG00000000937	clp1	98	75.926	ENSMUSG00000027079	Clp1	99	75.926	Mus_musculus
ENSSLDG00000000937	clp1	98	75.694	MGP_PahariEiJ_G0025177	Clp1	99	75.694	Mus_pahari
ENSSLDG00000000937	clp1	98	75.926	MGP_SPRETEiJ_G0024646	Clp1	99	75.926	Mus_spretus
ENSSLDG00000000937	clp1	96	77.123	ENSMPUG00000000268	CLP1	98	77.123	Mustela_putorius_furo
ENSSLDG00000000937	clp1	99	76.322	ENSMLUG00000007904	CLP1	99	76.322	Myotis_lucifugus
ENSSLDG00000000937	clp1	96	76.887	ENSNGAG00000006165	Clp1	98	76.887	Nannospalax_galili
ENSSLDG00000000937	clp1	100	96.372	ENSNBRG00000005225	clp1	100	96.372	Neolamprologus_brichardi
ENSSLDG00000000937	clp1	78	73.333	ENSNLEG00000012809	-	97	73.333	Nomascus_leucogenys
ENSSLDG00000000937	clp1	98	76.037	ENSMEUG00000010949	CLP1	100	76.037	Notamacropus_eugenii
ENSSLDG00000000937	clp1	69	78.548	ENSOPRG00000007329	CLP1	100	78.548	Ochotona_princeps
ENSSLDG00000000937	clp1	96	77.358	ENSODEG00000011410	CLP1	98	77.358	Octodon_degus
ENSSLDG00000000937	clp1	100	96.372	ENSONIG00000005089	clp1	100	96.372	Oreochromis_niloticus
ENSSLDG00000000937	clp1	99	76.092	ENSOCUG00000007045	CLP1	99	76.092	Oryctolagus_cuniculus
ENSSLDG00000000937	clp1	100	94.104	ENSORLG00000003647	clp1	100	94.104	Oryzias_latipes
ENSSLDG00000000937	clp1	100	93.878	ENSORLG00020016676	clp1	100	93.878	Oryzias_latipes_hni
ENSSLDG00000000937	clp1	100	94.104	ENSORLG00015019484	clp1	100	94.104	Oryzias_latipes_hsok
ENSSLDG00000000937	clp1	100	94.331	ENSOMEG00000021303	clp1	100	94.331	Oryzias_melastigma
ENSSLDG00000000937	clp1	99	75.862	ENSOGAG00000004508	CLP1	99	75.862	Otolemur_garnettii
ENSSLDG00000000937	clp1	98	74.885	ENSOARG00000010145	CLP1	99	74.885	Ovis_aries
ENSSLDG00000000937	clp1	99	76.092	ENSPPAG00000041519	CLP1	98	77.594	Pan_paniscus
ENSSLDG00000000937	clp1	99	75.862	ENSPPRG00000006135	CLP1	99	75.862	Panthera_pardus
ENSSLDG00000000937	clp1	99	75.862	ENSPTIG00000015866	CLP1	99	75.862	Panthera_tigris_altaica
ENSSLDG00000000937	clp1	96	77.594	ENSPTRG00000047318	CLP1	98	77.594	Pan_troglodytes
ENSSLDG00000000937	clp1	99	76.092	ENSPANG00000017078	CLP1	98	76.092	Papio_anubis
ENSSLDG00000000937	clp1	100	86.292	ENSPKIG00000007697	clp1	100	86.292	Paramormyrops_kingsleyae
ENSSLDG00000000937	clp1	93	72.861	ENSPSIG00000005468	CLP1	99	72.861	Pelodiscus_sinensis
ENSSLDG00000000937	clp1	100	93.197	ENSPMGG00000012171	clp1	100	93.197	Periophthalmus_magnuspinnatus
ENSSLDG00000000937	clp1	98	76.157	ENSPEMG00000011213	-	99	76.157	Peromyscus_maniculatus_bairdii
ENSSLDG00000000937	clp1	95	68.646	ENSPMAG00000006707	clp1	97	68.646	Petromyzon_marinus
ENSSLDG00000000937	clp1	99	76.322	ENSPCIG00000011899	CLP1	99	76.322	Phascolarctos_cinereus
ENSSLDG00000000937	clp1	100	94.558	ENSPFOG00000008169	clp1	100	94.558	Poecilia_formosa
ENSSLDG00000000937	clp1	100	94.558	ENSPLAG00000022388	clp1	100	94.558	Poecilia_latipinna
ENSSLDG00000000937	clp1	100	94.558	ENSPMEG00000021088	clp1	100	94.558	Poecilia_mexicana
ENSSLDG00000000937	clp1	100	94.558	ENSPREG00000017802	clp1	100	94.558	Poecilia_reticulata
ENSSLDG00000000937	clp1	52	75.546	ENSPPYG00000003266	-	100	75.546	Pongo_abelii
ENSSLDG00000000937	clp1	99	75.862	ENSPCOG00000000360	CLP1	99	75.862	Propithecus_coquereli
ENSSLDG00000000937	clp1	96	77.123	ENSPVAG00000016270	CLP1	98	77.123	Pteropus_vampyrus
ENSSLDG00000000937	clp1	100	97.052	ENSPNYG00000017274	clp1	99	97.052	Pundamilia_nyererei
ENSSLDG00000000937	clp1	100	85.714	ENSPNAG00000026460	clp1	100	86.607	Pygocentrus_nattereri
ENSSLDG00000000937	clp1	98	75.926	ENSRNOG00000007416	Clp1	99	75.926	Rattus_norvegicus
ENSSLDG00000000937	clp1	96	77.594	ENSRBIG00000018191	CLP1	98	77.594	Rhinopithecus_bieti
ENSSLDG00000000937	clp1	99	76.092	ENSRROG00000039265	CLP1	98	77.594	Rhinopithecus_roxellana
ENSSLDG00000000937	clp1	96	77.594	ENSSBOG00000032517	-	98	77.594	Saimiri_boliviensis_boliviensis
ENSSLDG00000000937	clp1	94	62.802	ENSSBOG00000010558	-	93	62.802	Saimiri_boliviensis_boliviensis
ENSSLDG00000000937	clp1	95	77.910	ENSSHAG00000015695	CLP1	97	77.910	Sarcophilus_harrisii
ENSSLDG00000000937	clp1	100	85.430	ENSSFOG00015000628	clp1	100	85.872	Scleropages_formosus
ENSSLDG00000000937	clp1	100	97.052	ENSSMAG00000019423	clp1	99	97.052	Scophthalmus_maximus
ENSSLDG00000000937	clp1	100	99.773	ENSSDUG00000014495	clp1	100	99.773	Seriola_dumerili
ENSSLDG00000000937	clp1	52	75.439	ENSSARG00000002459	CLP1	100	75.439	Sorex_araneus
ENSSLDG00000000937	clp1	98	74.769	ENSSPUG00000016811	CLP1	99	74.769	Sphenodon_punctatus
ENSSLDG00000000937	clp1	100	97.959	ENSSPAG00000016052	clp1	100	97.959	Stegastes_partitus
ENSSLDG00000000937	clp1	96	77.123	ENSSSCG00000031442	CLP1	98	77.123	Sus_scrofa
ENSSLDG00000000937	clp1	96	76.651	ENSTGUG00000007002	CLP1	98	76.651	Taeniopygia_guttata
ENSSLDG00000000937	clp1	100	92.063	ENSTRUG00000012602	clp1	100	92.063	Takifugu_rubripes
ENSSLDG00000000937	clp1	100	91.383	ENSTNIG00000013125	clp1	100	91.383	Tetraodon_nigroviridis
ENSSLDG00000000937	clp1	95	77.143	ENSTBEG00000009975	CLP1	97	77.143	Tupaia_belangeri
ENSSLDG00000000937	clp1	96	77.123	ENSTTRG00000002096	CLP1	98	77.123	Tursiops_truncatus
ENSSLDG00000000937	clp1	96	77.123	ENSUAMG00000011388	CLP1	98	77.123	Ursus_americanus
ENSSLDG00000000937	clp1	96	77.123	ENSUMAG00000018317	CLP1	98	77.123	Ursus_maritimus
ENSSLDG00000000937	clp1	100	75.057	ENSVVUG00000017138	CLP1	99	75.057	Vulpes_vulpes
ENSSLDG00000000937	clp1	98	71.267	ENSXETG00000007088	clp1	99	71.493	Xenopus_tropicalis
ENSSLDG00000000937	clp1	100	94.331	ENSXCOG00000002287	clp1	100	94.331	Xiphophorus_couchianus
ENSSLDG00000000937	clp1	100	94.331	ENSXMAG00000009783	clp1	100	94.331	Xiphophorus_maculatus