EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSLDG00000001054 (Gene tree)
Gene ID
-
Gene Symbol
YTHDF1
Alias
C20orf21|FLJ20391
Full Name
YTH N6-methyladenosine RNA binding protein 1
Gene Type
protein_coding
Species
Seriola_lalandi_dorsalis
Status
putative
Strand
Minus strand
Length
9397 bases
Position
chrPEQF01098251.1:254889-264285
Accession
111651786
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSLDP00000001260YTHPF04146.154.8e-4111
ENSSLDP00000001227YTHPF04146.156.9e-4111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSLDT00000001338YTHDF1-2021554-ENSSLDP00000001260517 (aa)--
ENSSLDT00000001304YTHDF1-2015595XM_023401836ENSSLDP00000001227628 (aa)XP_023257604UPI000C6F975C
Gene Model
Click here to download ENSSLDG00000001054's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000001054's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSLDG00000001054YTHDF19476.389ENSSLDG00000019751ythdf27985.955
ENSSLDG00000001054YTHDF19095.000ENSSLDG00000024948ythdf19976.935
ENSSLDG00000001054YTHDF19585.922ENSSLDG00000005029ythdf38282.039
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSLDG00000001054YTHDF110071.908ENSG00000149658YTHDF110071.201Homo_sapiens
ENSSLDG00000001054YTHDF110096.019ENSAPOG00000010796YTHDF110096.019Acanthochromis_polyacanthus
ENSSLDG00000001054YTHDF19094.915ENSAPOG00000004358ythdf19976.094Acanthochromis_polyacanthus
ENSSLDG00000001054YTHDF19677.778ENSACIG00000011264ythdf19582.800Amphilophus_citrinellus
ENSSLDG00000001054YTHDF110087.080ENSACIG00000020083YTHDF110084.873Amphilophus_citrinellus
ENSSLDG00000001054YTHDF19392.821ENSAOCG00000022251ythdf19976.948Amphiprion_ocellaris
ENSSLDG00000001054YTHDF110096.019ENSAOCG00000012567YTHDF110096.019Amphiprion_ocellaris
ENSSLDG00000001054YTHDF110096.178ENSAPEG00000008750YTHDF110096.178Amphiprion_percula
ENSSLDG00000001054YTHDF19094.444ENSAPEG00000021878ythdf19976.656Amphiprion_percula
ENSSLDG00000001054YTHDF110095.223ENSATEG00000005996YTHDF110095.223Anabas_testudineus
ENSSLDG00000001054YTHDF19095.531ENSATEG00000023840ythdf19976.213Anabas_testudineus
ENSSLDG00000001054YTHDF19774.457ENSAPLG00000005985YTHDF18393.500Anas_platyrhynchos
ENSSLDG00000001054YTHDF110074.120ENSACAG00000005560YTHDF18988.479Anolis_carolinensis
ENSSLDG00000001054YTHDF110061.594ENSANAG00000021022-10061.011Aotus_nancymaae
ENSSLDG00000001054YTHDF110071.731ENSANAG00000034786-10068.421Aotus_nancymaae
ENSSLDG00000001054YTHDF110092.834ENSACLG00000025518YTHDF110092.994Astatotilapia_calliptera
ENSSLDG00000001054YTHDF110071.378ENSBTAG00000010383YTHDF110070.495Bos_taurus
ENSSLDG00000001054YTHDF110071.555ENSCJAG00000010056YTHDF110071.025Callithrix_jacchus
ENSSLDG00000001054YTHDF19071.845ENSCAFG00000012772YTHDF19971.262Canis_familiaris
ENSSLDG00000001054YTHDF19071.845ENSCAFG00020001214YTHDF19971.262Canis_lupus_dingo
ENSSLDG00000001054YTHDF110070.848ENSCHIG00000026494YTHDF110070.671Capra_hircus
ENSSLDG00000001054YTHDF19671.898ENSCAPG00000002544YTHDF19371.715Cavia_aperea
ENSSLDG00000001054YTHDF110071.858ENSCPOG00000010202YTHDF110071.858Cavia_porcellus
ENSSLDG00000001054YTHDF110071.201ENSCCAG00000024650YTHDF110070.671Cebus_capucinus
ENSSLDG00000001054YTHDF110072.389ENSCATG00000033272YTHDF110071.681Cercocebus_atys
ENSSLDG00000001054YTHDF110071.605ENSCLAG00000005989YTHDF110070.723Chinchilla_lanigera
ENSSLDG00000001054YTHDF110072.389ENSCSAG00000016266YTHDF110071.681Chlorocebus_sabaeus
ENSSLDG00000001054YTHDF110073.721ENSCPBG00000027183YTHDF110070.283Chrysemys_picta_bellii
ENSSLDG00000001054YTHDF19773.540ENSCANG00000029082YTHDF19772.810Colobus_angolensis_palliatus
ENSSLDG00000001054YTHDF110072.968ENSCGRG00001016568Ythdf110072.438Cricetulus_griseus_chok1gshd
ENSSLDG00000001054YTHDF19773.770ENSCGRG00000009207Ythdf19973.224Cricetulus_griseus_crigri
ENSSLDG00000001054YTHDF19677.963ENSCSEG00000020623YTHDF19778.743Cynoglossus_semilaevis
ENSSLDG00000001054YTHDF110090.287ENSCVAG00000014378YTHDF110091.720Cyprinodon_variegatus
ENSSLDG00000001054YTHDF19292.308ENSCVAG00000017940ythdf19973.899Cyprinodon_variegatus
ENSSLDG00000001054YTHDF19390.094ENSDARG00000016447ythdf110078.053Danio_rerio
ENSSLDG00000001054YTHDF110072.920ENSDNOG00000043590YTHDF110069.889Dasypus_novemcinctus
ENSSLDG00000001054YTHDF19771.067ENSDORG00000002879Ythdf19571.067Dipodomys_ordii
ENSSLDG00000001054YTHDF18667.760ENSETEG00000017860-9568.508Echinops_telfairi
ENSSLDG00000001054YTHDF110072.281ENSEASG00005023186YTHDF110070.253Equus_asinus_asinus
ENSSLDG00000001054YTHDF19871.658ENSECAG00000019475YTHDF110069.416Equus_caballus
ENSSLDG00000001054YTHDF19172.989ENSEEUG00000007461YTHDF110069.750Erinaceus_europaeus
ENSSLDG00000001054YTHDF19389.100ENSELUG00000022768ythdf18792.417Esox_lucius
ENSSLDG00000001054YTHDF19984.459ENSELUG00000001906YTHDF19975.544Esox_lucius
ENSSLDG00000001054YTHDF110074.205ENSFALG00000010463YTHDF110070.709Ficedula_albicollis
ENSSLDG00000001054YTHDF110071.809ENSFDAG00000019602YTHDF110070.745Fukomys_damarensis
ENSSLDG00000001054YTHDF19293.229ENSFHEG00000023218ythdf19974.684Fundulus_heteroclitus
ENSSLDG00000001054YTHDF110091.879ENSFHEG00000002540YTHDF110092.038Fundulus_heteroclitus
ENSSLDG00000001054YTHDF19295.312ENSGMOG00000019610ythdf17796.685Gadus_morhua
ENSSLDG00000001054YTHDF110073.638ENSGALG00000005745YTHDF18693.500Gallus_gallus
ENSSLDG00000001054YTHDF19897.115ENSGAFG00000021100YTHDF19895.588Gambusia_affinis
ENSSLDG00000001054YTHDF19295.480ENSGACG00000012014ythdf19974.724Gasterosteus_aculeatus
ENSSLDG00000001054YTHDF19794.286ENSGACG00000002613YTHDF19987.520Gasterosteus_aculeatus
ENSSLDG00000001054YTHDF110073.989ENSGAGG00000003007YTHDF110070.932Gopherus_agassizii
ENSSLDG00000001054YTHDF110072.261ENSGGOG00000008340YTHDF110071.555Gorilla_gorilla
ENSSLDG00000001054YTHDF110093.312ENSHBUG00000004875YTHDF110093.471Haplochromis_burtoni
ENSSLDG00000001054YTHDF19976.220ENSHBUG00000011284ythdf19974.639Haplochromis_burtoni
ENSSLDG00000001054YTHDF110071.986ENSHGLG00000006585YTHDF110071.099Heterocephalus_glaber_female
ENSSLDG00000001054YTHDF110071.986ENSHGLG00100004683YTHDF110071.099Heterocephalus_glaber_male
ENSSLDG00000001054YTHDF19293.846ENSHCOG00000008866ythdf19974.516Hippocampus_comes
ENSSLDG00000001054YTHDF110087.420ENSHCOG00000011303YTHDF110086.867Hippocampus_comes
ENSSLDG00000001054YTHDF19288.571ENSIPUG00000000425Ythdf19289.015Ictalurus_punctatus
ENSSLDG00000001054YTHDF19773.175ENSSTOG00000023001YTHDF19872.810Ictidomys_tridecemlineatus
ENSSLDG00000001054YTHDF19773.551ENSJJAG00000013589Ythdf110069.984Jaculus_jaculus
ENSSLDG00000001054YTHDF110094.268ENSKMAG00000017472YTHDF110094.268Kryptolebias_marmoratus
ENSSLDG00000001054YTHDF19294.444ENSKMAG00000005595ythdf19975.000Kryptolebias_marmoratus
ENSSLDG00000001054YTHDF110091.879ENSLBEG00000012068YTHDF110092.197Labrus_bergylta
ENSSLDG00000001054YTHDF19194.944ENSLBEG00000014105ythdf19976.424Labrus_bergylta
ENSSLDG00000001054YTHDF19091.282ENSLACG00000014195YTHDF18192.222Latimeria_chalumnae
ENSSLDG00000001054YTHDF110077.496ENSLOCG00000005020ythdf110076.378Lepisosteus_oculatus
ENSSLDG00000001054YTHDF110072.632ENSLAFG00000008884YTHDF110069.716Loxodonta_africana
ENSSLDG00000001054YTHDF110072.389ENSMFAG00000042868YTHDF110071.681Macaca_fascicularis
ENSSLDG00000001054YTHDF110072.389ENSMMUG00000009227YTHDF110071.681Macaca_mulatta
ENSSLDG00000001054YTHDF110072.389ENSMNEG00000030851YTHDF110071.681Macaca_nemestrina
ENSSLDG00000001054YTHDF19773.358ENSMLEG00000009252YTHDF19972.628Mandrillus_leucophaeus
ENSSLDG00000001054YTHDF110095.064ENSMAMG00000011072YTHDF110095.064Mastacembelus_armatus
ENSSLDG00000001054YTHDF19194.944ENSMAMG00000024255ythdf18294.944Mastacembelus_armatus
ENSSLDG00000001054YTHDF19976.415ENSMZEG00005026397ythdf19976.295Maylandia_zebra
ENSSLDG00000001054YTHDF110093.312ENSMZEG00005023596YTHDF110093.471Maylandia_zebra
ENSSLDG00000001054YTHDF19774.955ENSMGAG00000006139YTHDF18393.500Meleagris_gallopavo
ENSSLDG00000001054YTHDF110073.097ENSMAUG00000017660Ythdf110072.566Mesocricetus_auratus
ENSSLDG00000001054YTHDF110071.831ENSMICG00000032266YTHDF110071.655Microcebus_murinus
ENSSLDG00000001054YTHDF110072.743ENSMOCG00000013573Ythdf110072.566Microtus_ochrogaster
ENSSLDG00000001054YTHDF19989.155ENSMMOG00000020467YTHDF19989.793Mola_mola
ENSSLDG00000001054YTHDF19196.089ENSMMOG00000017500ythdf19875.566Mola_mola
ENSSLDG00000001054YTHDF19073.398ENSMODG00000016842YTHDF18591.500Monodelphis_domestica
ENSSLDG00000001054YTHDF110090.635ENSMALG00000022209YTHDF110090.635Monopterus_albus
ENSSLDG00000001054YTHDF19095.531ENSMALG00000015672ythdf19974.415Monopterus_albus
ENSSLDG00000001054YTHDF110072.566MGP_CAROLIEiJ_G0024790Ythdf110070.570Mus_caroli
ENSSLDG00000001054YTHDF110072.566ENSMUSG00000038848Ythdf110069.937Mus_musculus
ENSSLDG00000001054YTHDF110072.566MGP_PahariEiJ_G0026237Ythdf110069.778Mus_pahari
ENSSLDG00000001054YTHDF110072.566MGP_SPRETEiJ_G0025715Ythdf110069.937Mus_spretus
ENSSLDG00000001054YTHDF18487.685ENSMPUG00000008111YTHDF110070.623Mustela_putorius_furo
ENSSLDG00000001054YTHDF19773.140ENSMLUG00000002241YTHDF19769.526Myotis_lucifugus
ENSSLDG00000001054YTHDF110072.566ENSNGAG00000000334Ythdf110068.809Nannospalax_galili
ENSSLDG00000001054YTHDF19595.098ENSNBRG00000015321YTHDF19993.564Neolamprologus_brichardi
ENSSLDG00000001054YTHDF19194.944ENSNBRG00000008213ythdf19583.391Neolamprologus_brichardi
ENSSLDG00000001054YTHDF19568.571ENSOPRG00000001758-9867.446Ochotona_princeps
ENSSLDG00000001054YTHDF110071.908ENSODEG00000004380-10069.097Octodon_degus
ENSSLDG00000001054YTHDF110059.649ENSODEG00000000074-10057.528Octodon_degus
ENSSLDG00000001054YTHDF19476.285ENSONIG00000016799ythdf19975.723Oreochromis_niloticus
ENSSLDG00000001054YTHDF110073.944ENSOANG00000003723YTHDF110073.852Ornithorhynchus_anatinus
ENSSLDG00000001054YTHDF17485.946ENSOCUG00000012780YTHDF110069.328Oryctolagus_cuniculus
ENSSLDG00000001054YTHDF19974.528ENSORLG00000014665YTHDF17894.972Oryzias_latipes
ENSSLDG00000001054YTHDF110089.968ENSORLG00000009739YTHDF110089.809Oryzias_latipes
ENSSLDG00000001054YTHDF110089.331ENSORLG00020001332YTHDF110089.331Oryzias_latipes_hni
ENSSLDG00000001054YTHDF19195.480ENSORLG00020000307ythdf17894.972Oryzias_latipes_hni
ENSSLDG00000001054YTHDF19694.737ENSORLG00015018321YTHDF110089.490Oryzias_latipes_hsok
ENSSLDG00000001054YTHDF19195.480ENSORLG00015006302ythdf17894.972Oryzias_latipes_hsok
ENSSLDG00000001054YTHDF110089.809ENSOMEG00000011843YTHDF110089.490Oryzias_melastigma
ENSSLDG00000001054YTHDF19294.972ENSOMEG00000002941YTHDF19974.290Oryzias_melastigma
ENSSLDG00000001054YTHDF110070.702ENSOGAG00000000480YTHDF110065.542Otolemur_garnettii
ENSSLDG00000001054YTHDF19775.048ENSOARG00000011639YTHDF19674.476Ovis_aries
ENSSLDG00000001054YTHDF19773.224ENSPPAG00000023277YTHDF19872.495Pan_paniscus
ENSSLDG00000001054YTHDF19775.740ENSPTIG00000017355YTHDF19779.134Panthera_tigris_altaica
ENSSLDG00000001054YTHDF110072.261ENSPTRG00000013730YTHDF110071.555Pan_troglodytes
ENSSLDG00000001054YTHDF110072.389ENSPANG00000021472YTHDF110071.681Papio_anubis
ENSSLDG00000001054YTHDF19672.862ENSPKIG00000005026YTHDF19871.546Paramormyrops_kingsleyae
ENSSLDG00000001054YTHDF19574.449ENSPSIG00000005529YTHDF18093.333Pelodiscus_sinensis
ENSSLDG00000001054YTHDF19794.170ENSPMGG00000009101YTHDF19986.016Periophthalmus_magnuspinnatus
ENSSLDG00000001054YTHDF18895.556ENSPMGG00000015328ythdf19776.431Periophthalmus_magnuspinnatus
ENSSLDG00000001054YTHDF19773.905ENSPEMG00000020199Ythdf19971.791Peromyscus_maniculatus_bairdii
ENSSLDG00000001054YTHDF19973.118ENSPCIG00000017170YTHDF110069.707Phascolarctos_cinereus
ENSSLDG00000001054YTHDF19391.795ENSPFOG00000005405ythdf19974.842Poecilia_formosa
ENSSLDG00000001054YTHDF110093.312ENSPLAG00000006298YTHDF110093.153Poecilia_latipinna
ENSSLDG00000001054YTHDF19391.795ENSPLAG00000006653ythdf19974.877Poecilia_latipinna
ENSSLDG00000001054YTHDF110093.312ENSPMEG00000020969-10093.706Poecilia_mexicana
ENSSLDG00000001054YTHDF19693.229ENSPMEG00000023753ythdf19974.959Poecilia_mexicana
ENSSLDG00000001054YTHDF19793.126ENSPREG00000017662YTHDF19893.126Poecilia_reticulata
ENSSLDG00000001054YTHDF19392.821ENSPREG00000002173ythdf19975.407Poecilia_reticulata
ENSSLDG00000001054YTHDF19777.579ENSPPYG00000011226YTHDF110081.858Pongo_abelii
ENSSLDG00000001054YTHDF18870.459ENSPCAG00000002452YTHDF110067.901Procavia_capensis
ENSSLDG00000001054YTHDF110071.731ENSPCOG00000025969YTHDF110070.848Propithecus_coquereli
ENSSLDG00000001054YTHDF19976.220ENSPNYG00000014007ythdf19975.244Pundamilia_nyererei
ENSSLDG00000001054YTHDF110093.312ENSPNYG00000002266YTHDF110093.471Pundamilia_nyererei
ENSSLDG00000001054YTHDF15587.241ENSPNAG00000012447ythdf110084.404Pygocentrus_nattereri
ENSSLDG00000001054YTHDF110072.566ENSRNOG00000027015Ythdf110069.778Rattus_norvegicus
ENSSLDG00000001054YTHDF110071.327ENSRBIG00000044959YTHDF110070.619Rhinopithecus_bieti
ENSSLDG00000001054YTHDF110071.327ENSRROG00000033014YTHDF110070.619Rhinopithecus_roxellana
ENSSLDG00000001054YTHDF19770.705ENSSBOG00000027278YTHDF110069.767Saimiri_boliviensis_boliviensis
ENSSLDG00000001054YTHDF19570.470ENSSHAG00000010430YTHDF18969.634Sarcophilus_harrisii
ENSSLDG00000001054YTHDF19494.527ENSSFOG00015000284ythdf110076.471Scleropages_formosus
ENSSLDG00000001054YTHDF16591.720ENSSMAG00000013715ythdf19086.111Scophthalmus_maximus
ENSSLDG00000001054YTHDF19795.500ENSSMAG00000007635YTHDF110087.462Scophthalmus_maximus
ENSSLDG00000001054YTHDF19095.000ENSSDUG00000000435ythdf19976.972Seriola_dumerili
ENSSLDG00000001054YTHDF110099.054ENSSDUG00000015823YTHDF110099.054Seriola_dumerili
ENSSLDG00000001054YTHDF19073.938ENSSPUG00000015143YTHDF110068.919Sphenodon_punctatus
ENSSLDG00000001054YTHDF19094.444ENSSPAG00000014989ythdf19976.138Stegastes_partitus
ENSSLDG00000001054YTHDF110095.382ENSSPAG00000003666YTHDF110095.382Stegastes_partitus
ENSSLDG00000001054YTHDF19774.457ENSTGUG00000007565YTHDF110069.937Taeniopygia_guttata
ENSSLDG00000001054YTHDF19493.467ENSTRUG00000005049YTHDF19989.836Takifugu_rubripes
ENSSLDG00000001054YTHDF19395.385ENSTRUG00000004288ythdf18096.667Takifugu_rubripes
ENSSLDG00000001054YTHDF19976.923ENSTNIG00000012490ythdf19677.040Tetraodon_nigroviridis
ENSSLDG00000001054YTHDF110081.835ENSTNIG00000003975YTHDF110080.935Tetraodon_nigroviridis
ENSSLDG00000001054YTHDF19970.483ENSTTRG00000001804YTHDF19969.005Tursiops_truncatus
ENSSLDG00000001054YTHDF19772.352ENSUAMG00000011021YTHDF18787.736Ursus_americanus
ENSSLDG00000001054YTHDF19071.923ENSUMAG00000022290YTHDF110068.611Ursus_maritimus
ENSSLDG00000001054YTHDF19072.039ENSVVUG00000015275YTHDF19971.456Vulpes_vulpes
ENSSLDG00000001054YTHDF19388.517ENSXETG00000027086ythdf18288.325Xenopus_tropicalis
ENSSLDG00000001054YTHDF19474.916ENSXCOG00000002490ythdf19475.211Xiphophorus_couchianus
ENSSLDG00000001054YTHDF19892.182ENSXCOG00000008115YTHDF19992.020Xiphophorus_couchianus
ENSSLDG00000001054YTHDF110092.994ENSXMAG00000015644YTHDF110092.834Xiphophorus_maculatus
ENSSLDG00000001054YTHDF19493.229ENSXMAG00000008525ythdf19974.684Xiphophorus_maculatus

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