EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000001310 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: ubiquitin-40S ribosomal protein S27a-2-like
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 556 bases
Position: chrPEQF01057745.1:8-563
Accession: 111644582
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000001565	Ribosomal_S27	PF01599.19	1.1e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000001649	-	462	XM_023393497	ENSSLDP00000001565	153 (aa)	XP_023249265	-

Gene Model

Click here to download ENSSLDG00000001310's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000001310's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000001310	-	50	97.368	ENSSLDG00000020739	uba52	59	97.368
ENSSLDG00000001310	-	50	97.368	ENSSLDG00000007121	uba52	59	97.368

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000001310	-	99	83.766	ENSAPOG00000022780	rps27a	99	83.766	Acanthochromis_polyacanthus
ENSSLDG00000001310	-	99	83.766	ENSAOCG00000000282	rps27a	99	83.766	Amphiprion_ocellaris
ENSSLDG00000001310	-	99	83.766	ENSAPEG00000010300	rps27a	99	83.766	Amphiprion_percula
ENSSLDG00000001310	-	97	85.333	ENSATEG00000021507	rps27a	96	85.333	Anabas_testudineus
ENSSLDG00000001310	-	99	83.766	ENSAMXG00000040689	rps27a	99	83.766	Astyanax_mexicanus
ENSSLDG00000001310	-	77	90.678	ENSCJAG00000046243	-	100	90.678	Callithrix_jacchus
ENSSLDG00000001310	-	99	84.416	ENSTSYG00000000845	-	99	84.416	Carlito_syrichta
ENSSLDG00000001310	-	97	86.667	ENSCING00000005834	r27a	97	86.093	Ciona_intestinalis
ENSSLDG00000001310	-	97	81.757	ENSCSAVG00000001323	-	94	81.208	Ciona_savignyi
ENSSLDG00000001310	-	99	67.532	ENSCGRG00001008358	-	98	65.584	Cricetulus_griseus_chok1gshd
ENSSLDG00000001310	-	99	83.766	ENSCSEG00000001603	rps27a	99	83.766	Cynoglossus_semilaevis
ENSSLDG00000001310	-	99	83.766	ENSCVAG00000004811	rps27a	85	83.766	Cyprinodon_variegatus
ENSSLDG00000001310	-	99	83.766	ENSDARG00000032725	rps27a	99	83.766	Danio_rerio
ENSSLDG00000001310	-	100	81.290	FBgn0003942	RpS27A	99	81.290	Drosophila_melanogaster
ENSSLDG00000001310	-	99	85.065	ENSEBUG00000007396	rps27a	99	85.065	Eptatretus_burgeri
ENSSLDG00000001310	-	99	83.766	ENSELUG00000004527	rps27a	99	83.766	Esox_lucius
ENSSLDG00000001310	-	99	83.766	ENSFHEG00000001180	rps27a	99	83.766	Fundulus_heteroclitus
ENSSLDG00000001310	-	99	83.766	ENSGMOG00000011896	rps27a	90	83.766	Gadus_morhua
ENSSLDG00000001310	-	99	83.766	ENSGAFG00000014202	rps27a	99	83.766	Gambusia_affinis
ENSSLDG00000001310	-	99	83.766	ENSGACG00000011558	rps27a	99	83.766	Gasterosteus_aculeatus
ENSSLDG00000001310	-	99	83.766	ENSHBUG00000003375	rps27a	99	83.766	Haplochromis_burtoni
ENSSLDG00000001310	-	99	83.766	ENSHCOG00000019712	rps27a	99	83.766	Hippocampus_comes
ENSSLDG00000001310	-	99	83.766	ENSIPUG00000015317	rps27a	99	83.766	Ictalurus_punctatus
ENSSLDG00000001310	-	99	83.766	ENSKMAG00000003156	rps27a	99	83.766	Kryptolebias_marmoratus
ENSSLDG00000001310	-	99	83.766	ENSLBEG00000000541	rps27a	99	83.766	Labrus_bergylta
ENSSLDG00000001310	-	99	84.416	ENSLACG00000007672	rps27a	99	84.416	Latimeria_chalumnae
ENSSLDG00000001310	-	99	83.766	ENSLOCG00000015551	rps27a	95	83.766	Lepisosteus_oculatus
ENSSLDG00000001310	-	99	83.117	ENSMNEG00000026442	-	99	83.117	Macaca_nemestrina
ENSSLDG00000001310	-	89	87.681	ENSMLEG00000003375	-	100	87.681	Mandrillus_leucophaeus
ENSSLDG00000001310	-	99	83.766	ENSMAMG00000022556	rps27a	99	83.766	Mastacembelus_armatus
ENSSLDG00000001310	-	99	83.766	ENSMZEG00005004484	rps27a	99	83.766	Maylandia_zebra
ENSSLDG00000001310	-	99	83.117	ENSMMOG00000007733	rps27a	99	83.117	Mola_mola
ENSSLDG00000001310	-	99	83.766	ENSMALG00000014759	rps27a	99	83.766	Monopterus_albus
ENSSLDG00000001310	-	99	83.766	ENSNBRG00000010708	rps27a	99	83.766	Neolamprologus_brichardi
ENSSLDG00000001310	-	99	83.766	ENSONIG00000016075	rps27a	95	83.766	Oreochromis_niloticus
ENSSLDG00000001310	-	99	83.766	ENSORLG00000029546	rps27a	99	83.766	Oryzias_latipes
ENSSLDG00000001310	-	99	72.472	ENSORLG00020017665	-	99	72.472	Oryzias_latipes_hni
ENSSLDG00000001310	-	99	83.766	ENSORLG00015003772	rps27a	99	83.766	Oryzias_latipes_hsok
ENSSLDG00000001310	-	99	83.766	ENSOMEG00000022866	rps27a	99	83.766	Oryzias_melastigma
ENSSLDG00000001310	-	93	79.861	ENSOGAG00000029795	-	92	76.389	Otolemur_garnettii
ENSSLDG00000001310	-	99	81.169	ENSOARG00000014935	-	89	77.273	Ovis_aries
ENSSLDG00000001310	-	99	83.117	ENSPPAG00000023609	-	99	83.117	Pan_paniscus
ENSSLDG00000001310	-	99	84.416	ENSPTRG00000023227	-	99	84.416	Pan_troglodytes
ENSSLDG00000001310	-	99	83.766	ENSPKIG00000021492	rps27a	99	83.766	Paramormyrops_kingsleyae
ENSSLDG00000001310	-	77	80.833	ENSPMAG00000006335	-	98	80.833	Petromyzon_marinus
ENSSLDG00000001310	-	99	83.766	ENSPFOG00000013152	rps27a	99	83.766	Poecilia_formosa
ENSSLDG00000001310	-	99	83.766	ENSPLAG00000012639	rps27a	99	83.766	Poecilia_latipinna
ENSSLDG00000001310	-	99	83.766	ENSPMEG00000015419	rps27a	99	83.766	Poecilia_mexicana
ENSSLDG00000001310	-	99	83.766	ENSPREG00000012478	rps27a	99	83.766	Poecilia_reticulata
ENSSLDG00000001310	-	95	86.395	ENSPVAG00000016471	-	97	86.395	Pteropus_vampyrus
ENSSLDG00000001310	-	99	83.766	ENSPNYG00000019989	rps27a	99	83.766	Pundamilia_nyererei
ENSSLDG00000001310	-	99	83.766	ENSPNAG00000002903	rps27a	99	83.766	Pygocentrus_nattereri
ENSSLDG00000001310	-	95	83.108	YLR167W	RPS31	97	83.108	Saccharomyces_cerevisiae
ENSSLDG00000001310	-	99	83.766	ENSSFOG00015017733	rps27a	87	83.766	Scleropages_formosus
ENSSLDG00000001310	-	99	83.766	ENSSMAG00000004941	rps27a	99	83.766	Scophthalmus_maximus
ENSSLDG00000001310	-	99	83.766	ENSSDUG00000003170	rps27a	99	83.766	Seriola_dumerili
ENSSLDG00000001310	-	99	83.766	ENSSPAG00000022744	rps27a	99	83.766	Stegastes_partitus
ENSSLDG00000001310	-	99	83.766	ENSTRUG00000010963	rps27a	99	83.766	Takifugu_rubripes
ENSSLDG00000001310	-	89	80.435	ENSTNIG00000018689	rps27a	99	80.435	Tetraodon_nigroviridis
ENSSLDG00000001310	-	99	83.766	ENSXCOG00000003780	rps27a	99	83.766	Xiphophorus_couchianus
ENSSLDG00000001310	-	99	83.766	ENSXMAG00000000171	rps27a	99	83.766	Xiphophorus_maculatus