EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000001390 (Gene tree)
Gene ID: -
Gene Symbol: rbm10
Alias: si:ch73-205c16.2
Full Name: leucine rich repeat containing 23
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 13916 bases
Position: chrPEQF01099246.1:1743853-1757768
Accession: 111668974
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000001744	zf-RanBP	PF00641.18	3.2e-06	1	1
ENSSLDP00000001744	RRM_1	PF00076.22	2.8e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000001815	-	669	-	ENSSLDP00000001731	222 (aa)	-	-
ENSSLDT00000001828	-	3054	XM_023425165	ENSSLDP00000001744	955 (aa)	XP_023280933	UPI000C6F5B83
ENSSLDT00000001765	-	1962	XM_023425167	ENSSLDP00000001681	294 (aa)	XP_023280935	-

Gene Model

Click here to download ENSSLDG00000001390's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000001390's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000001390	rbm10	77	42.529	ENSSLDG00000015996	-	85	42.912
ENSSLDG00000001390	rbm10	73	45.157	ENSSLDG00000002329	rbm5	89	42.824

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000001390	rbm10	77	52.528	ENSG00000182872	RBM10	90	51.746	Homo_sapiens
ENSSLDG00000001390	rbm10	100	86.911	ENSAPOG00000018220	rbm10	100	87.225	Acanthochromis_polyacanthus
ENSSLDG00000001390	rbm10	77	52.287	ENSAMEG00000012961	RBM10	78	52.169	Ailuropoda_melanoleuca
ENSSLDG00000001390	rbm10	69	87.172	ENSACIG00000013859	rbm10	98	87.172	Amphilophus_citrinellus
ENSSLDG00000001390	rbm10	92	86.728	ENSAOCG00000022677	rbm10	98	87.071	Amphiprion_ocellaris
ENSSLDG00000001390	rbm10	100	87.330	ENSAPEG00000005675	rbm10	100	87.644	Amphiprion_percula
ENSSLDG00000001390	rbm10	100	85.042	ENSATEG00000023522	rbm10	100	85.460	Anabas_testudineus
ENSSLDG00000001390	rbm10	77	52.741	ENSACAG00000005527	RBM10	84	52.977	Anolis_carolinensis
ENSSLDG00000001390	rbm10	79	47.541	ENSANAG00000033026	-	93	42.377	Aotus_nancymaae
ENSSLDG00000001390	rbm10	77	50.732	ENSANAG00000026392	-	90	48.957	Aotus_nancymaae
ENSSLDG00000001390	rbm10	100	84.728	ENSACLG00000008773	rbm10	100	84.728	Astatotilapia_calliptera
ENSSLDG00000001390	rbm10	77	52.522	ENSBTAG00000002890	RBM10	90	51.741	Bos_taurus
ENSSLDG00000001390	rbm10	77	52.528	ENSCJAG00000012101	RBM10	84	50.721	Callithrix_jacchus
ENSSLDG00000001390	rbm10	77	49.692	ENSCAFG00000014863	RBM10	92	52.081	Canis_familiaris
ENSSLDG00000001390	rbm10	77	52.340	ENSCAFG00020021417	RBM10	78	51.557	Canis_lupus_dingo
ENSSLDG00000001390	rbm10	77	49.816	ENSCHIG00000000855	RBM10	93	48.558	Capra_hircus
ENSSLDG00000001390	rbm10	77	52.528	ENSTSYG00000030341	RBM10	93	51.697	Carlito_syrichta
ENSSLDG00000001390	rbm10	55	69.314	ENSCAPG00000013182	RBM10	80	63.407	Cavia_aperea
ENSSLDG00000001390	rbm10	77	52.147	ENSCPOG00000002939	RBM10	90	51.235	Cavia_porcellus
ENSSLDG00000001390	rbm10	77	51.617	ENSCCAG00000025788	RBM10	90	51.496	Cebus_capucinus
ENSSLDG00000001390	rbm10	77	52.528	ENSCATG00000018553	RBM10	93	50.391	Cercocebus_atys
ENSSLDG00000001390	rbm10	77	52.469	ENSCLAG00000001238	RBM10	93	50.841	Chinchilla_lanigera
ENSSLDG00000001390	rbm10	77	52.528	ENSCSAG00000013744	RBM10	78	52.534	Chlorocebus_sabaeus
ENSSLDG00000001390	rbm10	61	70.588	ENSCPBG00000000458	RBM10	71	70.588	Chrysemys_picta_bellii
ENSSLDG00000001390	rbm10	77	52.651	ENSCANG00000000359	RBM10	90	51.870	Colobus_angolensis_palliatus
ENSSLDG00000001390	rbm10	77	52.404	ENSCGRG00001017158	Rbm10	91	51.411	Cricetulus_griseus_chok1gshd
ENSSLDG00000001390	rbm10	77	52.404	ENSCGRG00000011339	Rbm10	91	51.411	Cricetulus_griseus_crigri
ENSSLDG00000001390	rbm10	100	72.042	ENSCVAG00000009548	rbm10	100	72.461	Cyprinodon_variegatus
ENSSLDG00000001390	rbm10	99	56.012	ENSDARG00000077400	rbm10	100	81.203	Danio_rerio
ENSSLDG00000001390	rbm10	51	55.303	ENSDNOG00000031259	RBM10	71	65.833	Dasypus_novemcinctus
ENSSLDG00000001390	rbm10	77	52.774	ENSDORG00000015022	Rbm10	90	51.870	Dipodomys_ordii
ENSSLDG00000001390	rbm10	73	49.608	ENSETEG00000003131	RBM10	79	49.476	Echinops_telfairi
ENSSLDG00000001390	rbm10	77	49.815	ENSEASG00005014310	RBM10	89	49.692	Equus_asinus_asinus
ENSSLDG00000001390	rbm10	77	51.519	ENSECAG00000000287	RBM10	89	50.737	Equus_caballus
ENSSLDG00000001390	rbm10	98	73.779	ENSELUG00000019845	rbm10	89	73.779	Esox_lucius
ENSSLDG00000001390	rbm10	77	52.158	ENSFCAG00000001395	RBM10	90	51.372	Felis_catus
ENSSLDG00000001390	rbm10	80	50.418	ENSFDAG00000002328	RBM10	93	50.299	Fukomys_damarensis
ENSSLDG00000001390	rbm10	100	72.234	ENSFHEG00000021050	rbm10	100	72.860	Fundulus_heteroclitus
ENSSLDG00000001390	rbm10	51	77.733	ENSGMOG00000011093	rbm10	100	77.733	Gadus_morhua
ENSSLDG00000001390	rbm10	51	86.382	ENSGACG00000009953	rbm10	100	87.221	Gasterosteus_aculeatus
ENSSLDG00000001390	rbm10	77	53.184	ENSGAGG00000001747	RBM10	84	53.933	Gopherus_agassizii
ENSSLDG00000001390	rbm10	77	52.528	ENSGGOG00000007869	RBM10	90	48.477	Gorilla_gorilla
ENSSLDG00000001390	rbm10	100	84.728	ENSHBUG00000000175	rbm10	100	84.728	Haplochromis_burtoni
ENSSLDG00000001390	rbm10	77	51.980	ENSHGLG00000000890	RBM10	93	50.361	Heterocephalus_glaber_female
ENSSLDG00000001390	rbm10	78	49.389	ENSHGLG00100001369	RBM10	91	49.020	Heterocephalus_glaber_male
ENSSLDG00000001390	rbm10	98	71.838	ENSHCOG00000002211	rbm10	98	71.838	Hippocampus_comes
ENSSLDG00000001390	rbm10	69	72.981	ENSIPUG00000014280	rbm10	89	72.981	Ictalurus_punctatus
ENSSLDG00000001390	rbm10	77	51.975	ENSSTOG00000014369	RBM10	90	51.183	Ictidomys_tridecemlineatus
ENSSLDG00000001390	rbm10	77	52.222	ENSJJAG00000014158	Rbm10	90	51.436	Jaculus_jaculus
ENSSLDG00000001390	rbm10	100	78.325	ENSKMAG00000019926	rbm10	100	78.325	Kryptolebias_marmoratus
ENSSLDG00000001390	rbm10	100	85.057	ENSLBEG00000007620	rbm10	100	85.057	Labrus_bergylta
ENSSLDG00000001390	rbm10	77	54.172	ENSLACG00000005251	RBM10	94	50.556	Latimeria_chalumnae
ENSSLDG00000001390	rbm10	72	67.525	ENSLOCG00000014304	rbm10	89	67.525	Lepisosteus_oculatus
ENSSLDG00000001390	rbm10	77	53.199	ENSLAFG00000002900	RBM10	90	51.754	Loxodonta_africana
ENSSLDG00000001390	rbm10	77	52.528	ENSMFAG00000032405	RBM10	90	51.746	Macaca_fascicularis
ENSSLDG00000001390	rbm10	77	52.404	ENSMMUG00000017423	RBM10	90	51.746	Macaca_mulatta
ENSSLDG00000001390	rbm10	77	52.528	ENSMNEG00000038904	RBM10	90	51.746	Macaca_nemestrina
ENSSLDG00000001390	rbm10	77	52.528	ENSMLEG00000042685	RBM10	90	51.746	Mandrillus_leucophaeus
ENSSLDG00000001390	rbm10	98	84.771	ENSMAMG00000008925	rbm10	98	85.304	Mastacembelus_armatus
ENSSLDG00000001390	rbm10	100	84.833	ENSMZEG00005027122	rbm10	100	84.833	Maylandia_zebra
ENSSLDG00000001390	rbm10	77	51.119	ENSMAUG00000011595	Rbm10	90	50.496	Mesocricetus_auratus
ENSSLDG00000001390	rbm10	77	52.404	ENSMICG00000016937	RBM10	93	50.914	Microcebus_murinus
ENSSLDG00000001390	rbm10	77	51.534	ENSMOCG00000022485	Rbm10	90	50.371	Microtus_ochrogaster
ENSSLDG00000001390	rbm10	75	52.163	ENSMODG00000010640	RBM10	85	52.611	Monodelphis_domestica
ENSSLDG00000001390	rbm10	100	86.088	ENSMALG00000011917	rbm10	100	86.088	Monopterus_albus
ENSSLDG00000001390	rbm10	77	52.540	MGP_CAROLIEiJ_G0032963	Rbm10	90	51.754	Mus_caroli
ENSSLDG00000001390	rbm10	77	52.104	ENSMUSG00000031060	Rbm10	90	51.244	Mus_musculus
ENSSLDG00000001390	rbm10	77	52.416	MGP_PahariEiJ_G0031506	Rbm10	90	51.629	Mus_pahari
ENSSLDG00000001390	rbm10	67	62.682	MGP_SPRETEiJ_G0034113	Rbm10	67	61.310	Mus_spretus
ENSSLDG00000001390	rbm10	77	51.779	ENSMPUG00000013129	RBM10	73	51.661	Mustela_putorius_furo
ENSSLDG00000001390	rbm10	50	47.429	ENSMLUG00000013095	RBM10	89	46.845	Myotis_lucifugus
ENSSLDG00000001390	rbm10	77	52.323	ENSNGAG00000019664	Rbm10	93	50.716	Nannospalax_galili
ENSSLDG00000001390	rbm10	70	58.371	ENSNLEG00000003018	RBM10	89	56.075	Nomascus_leucogenys
ENSSLDG00000001390	rbm10	77	52.469	ENSODEG00000008955	RBM10	93	50.962	Octodon_degus
ENSSLDG00000001390	rbm10	100	84.833	ENSONIG00000012370	rbm10	100	84.833	Oreochromis_niloticus
ENSSLDG00000001390	rbm10	77	47.985	ENSOANG00000004552	RBM10	83	46.742	Ornithorhynchus_anatinus
ENSSLDG00000001390	rbm10	77	50.369	ENSOCUG00000006454	RBM10	83	50.247	Oryctolagus_cuniculus
ENSSLDG00000001390	rbm10	100	72.880	ENSORLG00000008657	rbm10	100	72.775	Oryzias_latipes
ENSSLDG00000001390	rbm10	100	73.194	ENSORLG00020004636	rbm10	100	73.089	Oryzias_latipes_hni
ENSSLDG00000001390	rbm10	100	72.880	ENSORLG00015021021	rbm10	100	72.775	Oryzias_latipes_hsok
ENSSLDG00000001390	rbm10	100	74.031	ENSOMEG00000014309	rbm10	100	73.927	Oryzias_melastigma
ENSSLDG00000001390	rbm10	77	51.980	ENSOGAG00000008550	RBM10	78	51.985	Otolemur_garnettii
ENSSLDG00000001390	rbm10	76	50.188	ENSOARG00000013674	RBM10	76	50.063	Ovis_aries
ENSSLDG00000001390	rbm10	77	52.528	ENSPPAG00000040583	RBM10	90	51.746	Pan_paniscus
ENSSLDG00000001390	rbm10	77	52.035	ENSPPRG00000023784	RBM10	90	51.247	Panthera_pardus
ENSSLDG00000001390	rbm10	65	68.214	ENSPTIG00000017219	RBM10	86	60.234	Panthera_tigris_altaica
ENSSLDG00000001390	rbm10	77	52.528	ENSPTRG00000021837	RBM10	90	50.368	Pan_troglodytes
ENSSLDG00000001390	rbm10	77	52.528	ENSPANG00000013608	RBM10	93	50.391	Papio_anubis
ENSSLDG00000001390	rbm10	97	57.836	ENSPKIG00000007372	rbm10	99	60.928	Paramormyrops_kingsleyae
ENSSLDG00000001390	rbm10	77	52.399	ENSPEMG00000012165	Rbm10	90	51.241	Peromyscus_maniculatus_bairdii
ENSSLDG00000001390	rbm10	77	52.035	ENSPCIG00000027962	RBM10	83	52.035	Phascolarctos_cinereus
ENSSLDG00000001390	rbm10	83	74.637	ENSPFOG00000005428	rbm10	98	73.488	Poecilia_formosa
ENSSLDG00000001390	rbm10	100	74.268	ENSPLAG00000013887	rbm10	100	74.268	Poecilia_latipinna
ENSSLDG00000001390	rbm10	100	74.582	ENSPMEG00000005032	rbm10	100	74.582	Poecilia_mexicana
ENSSLDG00000001390	rbm10	100	72.699	ENSPREG00000019319	rbm10	100	72.699	Poecilia_reticulata
ENSSLDG00000001390	rbm10	77	49.064	ENSPPYG00000020285	RBM10	82	48.702	Pongo_abelii
ENSSLDG00000001390	rbm10	77	46.642	ENSPCAG00000000239	RBM10	83	46.914	Procavia_capensis
ENSSLDG00000001390	rbm10	77	52.404	ENSPCOG00000023562	RBM10	93	48.627	Propithecus_coquereli
ENSSLDG00000001390	rbm10	59	42.128	ENSPVAG00000006787	RBM10	63	41.826	Pteropus_vampyrus
ENSSLDG00000001390	rbm10	100	84.833	ENSPNYG00000015230	rbm10	100	84.833	Pundamilia_nyererei
ENSSLDG00000001390	rbm10	95	58.493	ENSPNAG00000011074	rbm10	100	58.359	Pygocentrus_nattereri
ENSSLDG00000001390	rbm10	77	51.970	ENSRNOG00000008472	Rbm10	90	51.247	Rattus_norvegicus
ENSSLDG00000001390	rbm10	77	52.114	ENSRBIG00000040371	RBM10	90	51.746	Rhinopithecus_bieti
ENSSLDG00000001390	rbm10	77	52.114	ENSRROG00000043355	RBM10	90	51.746	Rhinopithecus_roxellana
ENSSLDG00000001390	rbm10	77	51.617	ENSSBOG00000022873	RBM10	90	51.496	Saimiri_boliviensis_boliviensis
ENSSLDG00000001390	rbm10	67	41.969	ENSSHAG00000007724	-	80	32.609	Sarcophilus_harrisii
ENSSLDG00000001390	rbm10	100	58.285	ENSSFOG00015010701	rbm10	100	58.463	Scleropages_formosus
ENSSLDG00000001390	rbm10	100	86.715	ENSSMAG00000006556	rbm10	98	87.313	Scophthalmus_maximus
ENSSLDG00000001390	rbm10	71	46.559	ENSSARG00000014122	RBM10	76	46.143	Sorex_araneus
ENSSLDG00000001390	rbm10	92	71.622	ENSSPAG00000004647	rbm10	91	70.449	Stegastes_partitus
ENSSLDG00000001390	rbm10	77	51.856	ENSSSCG00000012271	RBM10	90	51.064	Sus_scrofa
ENSSLDG00000001390	rbm10	100	75.628	ENSTRUG00000010215	rbm10	100	76.151	Takifugu_rubripes
ENSSLDG00000001390	rbm10	88	74.369	ENSTNIG00000015014	rbm10	98	74.401	Tetraodon_nigroviridis
ENSSLDG00000001390	rbm10	50	58.716	ENSTBEG00000005519	RBM10	61	58.716	Tupaia_belangeri
ENSSLDG00000001390	rbm10	77	49.877	ENSTTRG00000013653	RBM10	83	49.753	Tursiops_truncatus
ENSSLDG00000001390	rbm10	86	47.485	ENSUAMG00000026047	RBM10	92	48.050	Ursus_americanus
ENSSLDG00000001390	rbm10	77	53.097	ENSVVUG00000014315	RBM10	83	52.704	Vulpes_vulpes