EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000001784 (Gene tree)
Gene ID: -
Gene Symbol: rasef
Alias: si:ch73-275j21.1
Full Name: RAS and EF-hand domain containing
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 24220 bases
Position: chrPEQF01099003.1:2554771-2578990
Accession: 111660875
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000002173	MMR_HSR1	PF01926.23	3.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000002270	-	5552	XM_023414301	ENSSLDP00000002173	918 (aa)	XP_023270069	UPI000C6F72D5

Gene Model

Click here to download ENSSLDG00000001784's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000001784's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000001784	rasef	55	42.347	ENSSLDG00000022995	cracr2b	75	45.679
ENSSLDG00000001784	rasef	90	44.615	ENSSLDG00000000877	zgc:162879	99	44.615

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000001784	rasef	91	51.562	ENSG00000165105	RASEF	99	51.562	Homo_sapiens
ENSSLDG00000001784	rasef	93	76.712	ENSAPOG00000024369	rasef	100	80.251	Acanthochromis_polyacanthus
ENSSLDG00000001784	rasef	87	56.863	ENSAMEG00000009467	RASEF	98	56.364	Ailuropoda_melanoleuca
ENSSLDG00000001784	rasef	90	75.516	ENSACIG00000005549	rasef	98	75.325	Amphilophus_citrinellus
ENSSLDG00000001784	rasef	92	76.056	ENSAOCG00000011464	rasef	97	76.056	Amphiprion_ocellaris
ENSSLDG00000001784	rasef	93	82.073	ENSAPEG00000003461	rasef	100	81.933	Amphiprion_percula
ENSSLDG00000001784	rasef	90	82.570	ENSATEG00000015032	rasef	100	82.422	Anabas_testudineus
ENSSLDG00000001784	rasef	66	52.026	ENSAPLG00000013969	RASEF	95	51.702	Anas_platyrhynchos
ENSSLDG00000001784	rasef	92	52.239	ENSACAG00000002155	RASEF	99	52.239	Anolis_carolinensis
ENSSLDG00000001784	rasef	90	51.667	ENSANAG00000035226	RASEF	99	49.934	Aotus_nancymaae
ENSSLDG00000001784	rasef	93	83.122	ENSACLG00000017818	rasef	100	82.841	Astatotilapia_calliptera
ENSSLDG00000001784	rasef	88	55.226	ENSAMXG00000011411	rasef	94	55.367	Astyanax_mexicanus
ENSSLDG00000001784	rasef	90	51.562	ENSBTAG00000021751	RASEF	99	51.562	Bos_taurus
ENSSLDG00000001784	rasef	91	53.125	ENSCJAG00000003547	RASEF	99	53.125	Callithrix_jacchus
ENSSLDG00000001784	rasef	89	53.135	ENSCAFG00000001453	RASEF	93	51.562	Canis_familiaris
ENSSLDG00000001784	rasef	92	51.562	ENSCAFG00020023859	RASEF	99	51.562	Canis_lupus_dingo
ENSSLDG00000001784	rasef	90	52.542	ENSCHIG00000020336	RASEF	99	53.125	Capra_hircus
ENSSLDG00000001784	rasef	58	51.852	ENSTSYG00000006987	RASEF	99	51.481	Carlito_syrichta
ENSSLDG00000001784	rasef	56	45.793	ENSCAPG00000010585	-	99	45.597	Cavia_aperea
ENSSLDG00000001784	rasef	66	51.220	ENSCPOG00000005004	RASEF	99	51.057	Cavia_porcellus
ENSSLDG00000001784	rasef	90	53.333	ENSCCAG00000031624	RASEF	99	53.125	Cebus_capucinus
ENSSLDG00000001784	rasef	91	51.562	ENSCSAG00000007663	RASEF	99	51.562	Chlorocebus_sabaeus
ENSSLDG00000001784	rasef	64	53.719	ENSCHOG00000001831	RASEF	96	53.554	Choloepus_hoffmanni
ENSSLDG00000001784	rasef	93	56.250	ENSCPBG00000019037	RASEF	99	56.250	Chrysemys_picta_bellii
ENSSLDG00000001784	rasef	90	51.667	ENSCANG00000034081	RASEF	99	51.562	Colobus_angolensis_palliatus
ENSSLDG00000001784	rasef	66	51.792	ENSCGRG00001001324	Rasef	99	50.977	Cricetulus_griseus_chok1gshd
ENSSLDG00000001784	rasef	62	51.724	ENSCGRG00000006455	Rasef	99	50.862	Cricetulus_griseus_crigri
ENSSLDG00000001784	rasef	87	69.360	ENSCSEG00000017898	rasef	93	69.207	Cynoglossus_semilaevis
ENSSLDG00000001784	rasef	100	76.942	ENSCVAG00000006168	rasef	100	75.956	Cyprinodon_variegatus
ENSSLDG00000001784	rasef	89	58.333	ENSDARG00000076250	rasef	99	56.130	Danio_rerio
ENSSLDG00000001784	rasef	93	50.648	ENSDNOG00000006002	RASEF	91	50.518	Dasypus_novemcinctus
ENSSLDG00000001784	rasef	61	51.937	ENSDORG00000015570	Rasef	99	51.675	Dipodomys_ordii
ENSSLDG00000001784	rasef	87	47.458	ENSEBUG00000012629	rasef	96	47.458	Eptatretus_burgeri
ENSSLDG00000001784	rasef	65	35.266	ENSEBUG00000012179	rasef	99	35.135	Eptatretus_burgeri
ENSSLDG00000001784	rasef	91	56.250	ENSEASG00005015967	RASEF	99	56.250	Equus_asinus_asinus
ENSSLDG00000001784	rasef	97	55.556	ENSECAG00000000324	RASEF	99	56.250	Equus_caballus
ENSSLDG00000001784	rasef	62	47.708	ENSEEUG00000008455	RASEF	99	47.708	Erinaceus_europaeus
ENSSLDG00000001784	rasef	92	52.113	ENSFCAG00000002416	RASEF	99	50.133	Felis_catus
ENSSLDG00000001784	rasef	66	53.301	ENSFALG00000003611	RASEF	99	52.979	Ficedula_albicollis
ENSSLDG00000001784	rasef	66	52.827	ENSFDAG00000013428	RASEF	99	52.666	Fukomys_damarensis
ENSSLDG00000001784	rasef	90	79.221	ENSFHEG00000022470	rasef	92	79.221	Fundulus_heteroclitus
ENSSLDG00000001784	rasef	81	85.549	ENSGMOG00000010090	rasef	98	85.549	Gadus_morhua
ENSSLDG00000001784	rasef	91	56.250	ENSGALG00000012576	RASEF	99	55.385	Gallus_gallus
ENSSLDG00000001784	rasef	97	78.670	ENSGAFG00000013735	rasef	99	77.701	Gambusia_affinis
ENSSLDG00000001784	rasef	94	76.858	ENSGACG00000007528	rasef	100	76.718	Gasterosteus_aculeatus
ENSSLDG00000001784	rasef	88	56.250	ENSGAGG00000007338	RASEF	96	56.250	Gopherus_agassizii
ENSSLDG00000001784	rasef	91	51.562	ENSGGOG00000006651	RASEF	99	51.562	Gorilla_gorilla
ENSSLDG00000001784	rasef	100	78.266	ENSHBUG00000010345	rasef	100	78.022	Haplochromis_burtoni
ENSSLDG00000001784	rasef	91	52.174	ENSHGLG00000000399	RASEF	99	52.174	Heterocephalus_glaber_female
ENSSLDG00000001784	rasef	66	52.504	ENSHGLG00100008043	RASEF	99	52.181	Heterocephalus_glaber_male
ENSSLDG00000001784	rasef	91	84.264	ENSHCOG00000010976	rasef	99	68.919	Hippocampus_comes
ENSSLDG00000001784	rasef	88	54.286	ENSIPUG00000008768	rasef	94	54.298	Ictalurus_punctatus
ENSSLDG00000001784	rasef	90	52.542	ENSSTOG00000004311	RASEF	99	49.801	Ictidomys_tridecemlineatus
ENSSLDG00000001784	rasef	66	53.398	ENSJJAG00000023215	Rasef	99	53.074	Jaculus_jaculus
ENSSLDG00000001784	rasef	100	70.828	ENSKMAG00000021106	rasef	100	71.338	Kryptolebias_marmoratus
ENSSLDG00000001784	rasef	85	86.574	ENSLBEG00000021098	-	95	86.574	Labrus_bergylta
ENSSLDG00000001784	rasef	88	56.923	ENSLACG00000010849	RASEF	95	56.923	Latimeria_chalumnae
ENSSLDG00000001784	rasef	92	57.698	ENSLOCG00000002094	rasef	99	57.420	Lepisosteus_oculatus
ENSSLDG00000001784	rasef	66	53.945	ENSLAFG00000010552	RASEF	99	53.623	Loxodonta_africana
ENSSLDG00000001784	rasef	91	53.125	ENSMFAG00000046414	RASEF	99	53.125	Macaca_fascicularis
ENSSLDG00000001784	rasef	91	51.562	ENSMNEG00000044341	RASEF	99	51.562	Macaca_nemestrina
ENSSLDG00000001784	rasef	91	51.562	ENSMLEG00000034579	RASEF	99	51.562	Mandrillus_leucophaeus
ENSSLDG00000001784	rasef	83	81.626	ENSMAMG00000001536	rasef	96	81.463	Mastacembelus_armatus
ENSSLDG00000001784	rasef	90	74.026	ENSMZEG00005004819	rasef	99	74.026	Maylandia_zebra
ENSSLDG00000001784	rasef	66	53.105	ENSMAUG00000010820	Rasef	99	52.451	Mesocricetus_auratus
ENSSLDG00000001784	rasef	86	53.191	ENSMICG00000011836	RASEF	99	54.688	Microcebus_murinus
ENSSLDG00000001784	rasef	67	52.167	ENSMOCG00000000943	Rasef	99	50.865	Microtus_ochrogaster
ENSSLDG00000001784	rasef	91	73.684	ENSMMOG00000000102	rasef	98	73.684	Mola_mola
ENSSLDG00000001784	rasef	91	56.061	ENSMODG00000009037	RASEF	99	56.061	Monodelphis_domestica
ENSSLDG00000001784	rasef	93	73.484	ENSMALG00000009830	rasef	100	73.061	Monopterus_albus
ENSSLDG00000001784	rasef	68	51.104	MGP_CAROLIEiJ_G0026109	Rasef	99	51.384	Mus_caroli
ENSSLDG00000001784	rasef	92	51.243	ENSMUSG00000043003	Rasef	99	51.557	Mus_musculus
ENSSLDG00000001784	rasef	68	50.631	MGP_PahariEiJ_G0028447	Rasef	99	50.170	Mus_pahari
ENSSLDG00000001784	rasef	68	51.104	MGP_SPRETEiJ_G0027075	Rasef	99	51.384	Mus_spretus
ENSSLDG00000001784	rasef	62	50.862	ENSMPUG00000013070	RASEF	99	50.690	Mustela_putorius_furo
ENSSLDG00000001784	rasef	87	52.542	ENSMLUG00000013108	RASEF	99	53.125	Myotis_lucifugus
ENSSLDG00000001784	rasef	62	52.668	ENSNGAG00000014878	Rasef	99	52.496	Nannospalax_galili
ENSSLDG00000001784	rasef	90	75.325	ENSNBRG00000012335	rasef	99	75.325	Neolamprologus_brichardi
ENSSLDG00000001784	rasef	91	51.562	ENSNLEG00000003245	RASEF	99	51.562	Nomascus_leucogenys
ENSSLDG00000001784	rasef	91	55.385	ENSMEUG00000016412	RASEF	99	55.385	Notamacropus_eugenii
ENSSLDG00000001784	rasef	78	51.724	ENSOPRG00000002742	-	80	51.724	Ochotona_princeps
ENSSLDG00000001784	rasef	100	78.537	ENSONIG00000015021	rasef	100	77.983	Oreochromis_niloticus
ENSSLDG00000001784	rasef	89	57.812	ENSOANG00000010379	RASEF	96	57.812	Ornithorhynchus_anatinus
ENSSLDG00000001784	rasef	90	52.542	ENSOCUG00000001548	RASEF	99	48.810	Oryctolagus_cuniculus
ENSSLDG00000001784	rasef	99	73.382	ENSORLG00000005076	rasef	99	73.016	Oryzias_latipes
ENSSLDG00000001784	rasef	99	73.138	ENSORLG00020020049	rasef	99	72.772	Oryzias_latipes_hni
ENSSLDG00000001784	rasef	99	73.748	ENSORLG00015008479	rasef	99	73.382	Oryzias_latipes_hsok
ENSSLDG00000001784	rasef	99	73.929	ENSOMEG00000023457	rasef	99	77.193	Oryzias_melastigma
ENSSLDG00000001784	rasef	66	53.387	ENSOGAG00000012724	RASEF	99	53.226	Otolemur_garnettii
ENSSLDG00000001784	rasef	93	50.130	ENSOARG00000009073	RASEF	98	50.651	Ovis_aries
ENSSLDG00000001784	rasef	91	51.562	ENSPPAG00000042152	RASEF	99	51.562	Pan_paniscus
ENSSLDG00000001784	rasef	81	53.333	ENSPPRG00000008487	RASEF	99	50.066	Panthera_pardus
ENSSLDG00000001784	rasef	68	53.135	ENSPTIG00000006676	RASEF	96	51.206	Panthera_tigris_altaica
ENSSLDG00000001784	rasef	91	51.562	ENSPTRG00000021052	RASEF	99	51.562	Pan_troglodytes
ENSSLDG00000001784	rasef	91	51.562	ENSPANG00000024899	RASEF	99	51.562	Papio_anubis
ENSSLDG00000001784	rasef	64	54.395	ENSPSIG00000017699	RASEF	92	54.098	Pelodiscus_sinensis
ENSSLDG00000001784	rasef	93	58.587	ENSPMGG00000015499	rasef	86	92.157	Periophthalmus_magnuspinnatus
ENSSLDG00000001784	rasef	66	52.589	ENSPEMG00000002797	Rasef	99	51.780	Peromyscus_maniculatus_bairdii
ENSSLDG00000001784	rasef	80	38.472	ENSPMAG00000001634	rasef	98	38.608	Petromyzon_marinus
ENSSLDG00000001784	rasef	91	56.923	ENSPCIG00000027655	RASEF	99	56.923	Phascolarctos_cinereus
ENSSLDG00000001784	rasef	96	73.884	ENSPFOG00000018924	rasef	99	72.936	Poecilia_formosa
ENSSLDG00000001784	rasef	66	69.040	ENSPLAG00000022907	RASEF	97	67.881	Poecilia_latipinna
ENSSLDG00000001784	rasef	94	79.972	ENSPMEG00000006546	rasef	100	79.221	Poecilia_mexicana
ENSSLDG00000001784	rasef	100	74.970	ENSPREG00000018728	rasef	100	74.244	Poecilia_reticulata
ENSSLDG00000001784	rasef	91	51.562	ENSPPYG00000019320	RASEF	99	51.562	Pongo_abelii
ENSSLDG00000001784	rasef	90	55.000	ENSPCOG00000022979	RASEF	99	54.688	Propithecus_coquereli
ENSSLDG00000001784	rasef	90	50.000	ENSPVAG00000003682	RASEF	99	50.000	Pteropus_vampyrus
ENSSLDG00000001784	rasef	92	79.710	ENSPNYG00000010579	rasef	96	79.420	Pundamilia_nyererei
ENSSLDG00000001784	rasef	87	55.316	ENSPNAG00000016447	rasef	95	55.079	Pygocentrus_nattereri
ENSSLDG00000001784	rasef	92	52.113	ENSRNOG00000024190	Rasef	99	52.113	Rattus_norvegicus
ENSSLDG00000001784	rasef	90	51.667	ENSRBIG00000039516	RASEF	99	51.562	Rhinopithecus_bieti
ENSSLDG00000001784	rasef	86	51.240	ENSRROG00000044397	RASEF	99	51.240	Rhinopithecus_roxellana
ENSSLDG00000001784	rasef	87	52.083	ENSSBOG00000029298	RASEF	99	52.083	Saimiri_boliviensis_boliviensis
ENSSLDG00000001784	rasef	91	56.923	ENSSFOG00015009014	rasef	99	56.061	Scleropages_formosus
ENSSLDG00000001784	rasef	99	77.218	ENSSMAG00000000942	rasef	99	81.363	Scophthalmus_maximus
ENSSLDG00000001784	rasef	89	82.432	ENSSDUG00000022228	rasef	93	82.432	Seriola_dumerili
ENSSLDG00000001784	rasef	92	53.125	ENSSPUG00000002899	RASEF	99	53.125	Sphenodon_punctatus
ENSSLDG00000001784	rasef	100	77.322	ENSSPAG00000002442	rasef	100	76.598	Stegastes_partitus
ENSSLDG00000001784	rasef	66	55.916	ENSSSCG00000040707	-	90	55.754	Sus_scrofa
ENSSLDG00000001784	rasef	91	57.812	ENSTGUG00000003216	RASEF	99	57.812	Taeniopygia_guttata
ENSSLDG00000001784	rasef	93	78.592	ENSTRUG00000011541	rasef	99	78.592	Takifugu_rubripes
ENSSLDG00000001784	rasef	96	69.548	ENSTNIG00000006010	rasef	99	69.415	Tetraodon_nigroviridis
ENSSLDG00000001784	rasef	90	53.333	ENSTTRG00000002061	RASEF	99	53.125	Tursiops_truncatus
ENSSLDG00000001784	rasef	90	53.333	ENSUAMG00000021591	RASEF	99	53.125	Ursus_americanus
ENSSLDG00000001784	rasef	66	52.989	ENSUMAG00000004670	RASEF	94	52.666	Ursus_maritimus
ENSSLDG00000001784	rasef	67	52.724	ENSVVUG00000029736	RASEF	99	50.543	Vulpes_vulpes
ENSSLDG00000001784	rasef	96	49.596	ENSXETG00000016758	mgc147600	99	49.461	Xenopus_tropicalis
ENSSLDG00000001784	rasef	62	63.176	ENSXCOG00000005178	rasef	84	62.718	Xiphophorus_couchianus
ENSSLDG00000001784	rasef	94	79.549	ENSXMAG00000015129	rasef	100	78.561	Xiphophorus_maculatus