EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000001835 (Gene tree)
Gene ID: -
Gene Symbol: tarbp2
Alias: fj51e12|wu:fj51e12|zgc:63778
Full Name: TARBP2%2C RISC loading complex RNA binding subunit
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 9528 bases
Position: chrPEQF01099319.1:51972-61499
Accession: 111670208
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000002264	dsrm	PF00035.26	2.3e-35	1	2
ENSSLDP00000002264	dsrm	PF00035.26	2.3e-35	2	2
ENSSLDP00000002267	dsrm	PF00035.26	3.4e-35	1	2
ENSSLDP00000002267	dsrm	PF00035.26	3.4e-35	2	2
ENSSLDP00000002264	DND1_DSRM	PF14709.7	4.4e-12	1	1
ENSSLDP00000002267	DND1_DSRM	PF14709.7	6.3e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000002366	-	4597	XM_023426837	ENSSLDP00000002267	345 (aa)	XP_023282605	UPI000C6FA38A
ENSSLDT00000002363	-	969	-	ENSSLDP00000002264	322 (aa)	-	-

Gene Model

Click here to download ENSSLDG00000001835's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000001835's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000001835	tarbp2	93	43.854	ENSSLDG00000000652	prkra	87	43.854

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000001835	tarbp2	100	64.481	ENSG00000139546	TARBP2	100	65.797	Homo_sapiens
ENSSLDG00000001835	tarbp2	100	97.681	ENSAPOG00000019892	tarbp2	100	97.681	Acanthochromis_polyacanthus
ENSSLDG00000001835	tarbp2	100	65.301	ENSAMEG00000012601	TARBP2	100	64.481	Ailuropoda_melanoleuca
ENSSLDG00000001835	tarbp2	100	94.203	ENSACIG00000016780	tarbp2	100	94.203	Amphilophus_citrinellus
ENSSLDG00000001835	tarbp2	100	97.971	ENSAOCG00000005201	tarbp2	100	97.971	Amphiprion_ocellaris
ENSSLDG00000001835	tarbp2	100	97.971	ENSAPEG00000008376	tarbp2	100	97.971	Amphiprion_percula
ENSSLDG00000001835	tarbp2	100	97.391	ENSATEG00000025012	tarbp2	100	97.391	Anabas_testudineus
ENSSLDG00000001835	tarbp2	100	68.508	ENSACAG00000001100	TARBP2	100	67.956	Anolis_carolinensis
ENSSLDG00000001835	tarbp2	100	64.481	ENSANAG00000034453	TARBP2	94	75.676	Aotus_nancymaae
ENSSLDG00000001835	tarbp2	95	95.122	ENSACLG00000018569	tarbp2	95	95.122	Astatotilapia_calliptera
ENSSLDG00000001835	tarbp2	100	85.260	ENSAMXG00000016665	tarbp2	100	84.104	Astyanax_mexicanus
ENSSLDG00000001835	tarbp2	100	65.574	ENSBTAG00000000435	TARBP2	100	65.027	Bos_taurus
ENSSLDG00000001835	tarbp2	100	64.754	ENSCJAG00000018668	TARBP2	100	64.481	Callithrix_jacchus
ENSSLDG00000001835	tarbp2	100	68.012	ENSCAFG00000006874	TARBP2	100	67.435	Canis_familiaris
ENSSLDG00000001835	tarbp2	100	64.754	ENSCAFG00020020735	TARBP2	100	66.087	Canis_lupus_dingo
ENSSLDG00000001835	tarbp2	100	65.135	ENSCHIG00000026017	TARBP2	100	64.420	Capra_hircus
ENSSLDG00000001835	tarbp2	100	65.574	ENSTSYG00000035683	TARBP2	94	75.676	Carlito_syrichta
ENSSLDG00000001835	tarbp2	67	69.196	ENSCAPG00000008981	TARBP2	98	70.136	Cavia_aperea
ENSSLDG00000001835	tarbp2	100	65.574	ENSCPOG00000001009	TARBP2	100	64.850	Cavia_porcellus
ENSSLDG00000001835	tarbp2	97	66.011	ENSCCAG00000033025	TARBP2	91	92.453	Cebus_capucinus
ENSSLDG00000001835	tarbp2	100	64.208	ENSCATG00000026344	TARBP2	94	75.676	Cercocebus_atys
ENSSLDG00000001835	tarbp2	100	64.674	ENSCLAG00000009175	TARBP2	100	64.305	Chinchilla_lanigera
ENSSLDG00000001835	tarbp2	100	64.208	ENSCSAG00000005479	TARBP2	100	63.934	Chlorocebus_sabaeus
ENSSLDG00000001835	tarbp2	100	68.975	ENSCPBG00000000654	TARBP2	100	70.588	Chrysemys_picta_bellii
ENSSLDG00000001835	tarbp2	100	64.481	ENSCANG00000040415	TARBP2	91	90.566	Colobus_angolensis_palliatus
ENSSLDG00000001835	tarbp2	100	64.658	ENSCGRG00001011856	TARBP2	100	63.836	Cricetulus_griseus_chok1gshd
ENSSLDG00000001835	tarbp2	100	64.658	ENSCGRG00000009088	TARBP2	100	64.609	Cricetulus_griseus_crigri
ENSSLDG00000001835	tarbp2	100	92.754	ENSCSEG00000010631	tarbp2	100	92.754	Cynoglossus_semilaevis
ENSSLDG00000001835	tarbp2	100	90.435	ENSCVAG00000009832	tarbp2	100	90.435	Cyprinodon_variegatus
ENSSLDG00000001835	tarbp2	100	82.471	ENSDARG00000070471	tarbp2	100	81.556	Danio_rerio
ENSSLDG00000001835	tarbp2	100	65.301	ENSDNOG00000002144	TARBP2	100	64.481	Dasypus_novemcinctus
ENSSLDG00000001835	tarbp2	66	70.136	ENSDORG00000001390	Tarbp2	91	70.588	Dipodomys_ordii
ENSSLDG00000001835	tarbp2	84	93.750	ENSETEG00000002458	TARBP2	72	93.443	Echinops_telfairi
ENSSLDG00000001835	tarbp2	96	61.465	ENSEBUG00000002377	tarbp2	98	62.420	Eptatretus_burgeri
ENSSLDG00000001835	tarbp2	100	65.574	ENSEASG00005010030	TARBP2	100	65.123	Equus_asinus_asinus
ENSSLDG00000001835	tarbp2	100	68.481	ENSECAG00000011695	TARBP2	94	75.676	Equus_caballus
ENSSLDG00000001835	tarbp2	84	62.500	ENSEEUG00000001128	-	99	61.859	Erinaceus_europaeus
ENSSLDG00000001835	tarbp2	100	85.345	ENSELUG00000010642	tarbp2	100	86.782	Esox_lucius
ENSSLDG00000001835	tarbp2	100	65.301	ENSFCAG00000007757	TARBP2	100	64.754	Felis_catus
ENSSLDG00000001835	tarbp2	100	65.301	ENSFDAG00000011932	TARBP2	100	66.122	Fukomys_damarensis
ENSSLDG00000001835	tarbp2	94	91.049	ENSFHEG00000016118	tarbp2	100	91.049	Fundulus_heteroclitus
ENSSLDG00000001835	tarbp2	100	86.455	ENSGMOG00000001290	tarbp2	100	86.455	Gadus_morhua
ENSSLDG00000001835	tarbp2	67	70.270	ENSGALG00000038939	-	84	70.852	Gallus_gallus
ENSSLDG00000001835	tarbp2	100	91.014	ENSGAFG00000013341	tarbp2	100	91.014	Gambusia_affinis
ENSSLDG00000001835	tarbp2	100	91.268	ENSGACG00000006645	tarbp2	100	90.141	Gasterosteus_aculeatus
ENSSLDG00000001835	tarbp2	100	68.975	ENSGAGG00000021169	TARBP2	100	67.867	Gopherus_agassizii
ENSSLDG00000001835	tarbp2	97	66.011	ENSGGOG00000012637	TARBP2	81	85.938	Gorilla_gorilla
ENSSLDG00000001835	tarbp2	100	94.783	ENSHBUG00000018639	tarbp2	100	94.783	Haplochromis_burtoni
ENSSLDG00000001835	tarbp2	100	64.674	ENSHGLG00000001284	TARBP2	100	64.305	Heterocephalus_glaber_female
ENSSLDG00000001835	tarbp2	100	64.674	ENSHGLG00100011274	TARBP2	100	64.305	Heterocephalus_glaber_male
ENSSLDG00000001835	tarbp2	100	87.826	ENSHCOG00000001027	tarbp2	100	87.826	Hippocampus_comes
ENSSLDG00000001835	tarbp2	100	82.808	ENSIPUG00000023701	tarbp2	100	82.521	Ictalurus_punctatus
ENSSLDG00000001835	tarbp2	97	66.854	ENSSTOG00000003678	TARBP2	100	65.164	Ictidomys_tridecemlineatus
ENSSLDG00000001835	tarbp2	100	94.203	ENSKMAG00000012142	tarbp2	100	94.203	Kryptolebias_marmoratus
ENSSLDG00000001835	tarbp2	100	94.350	ENSLBEG00000015027	tarbp2	100	94.350	Labrus_bergylta
ENSSLDG00000001835	tarbp2	74	91.228	ENSLACG00000007087	TARBP2	76	91.228	Latimeria_chalumnae
ENSSLDG00000001835	tarbp2	100	81.322	ENSLOCG00000005711	tarbp2	100	80.925	Lepisosteus_oculatus
ENSSLDG00000001835	tarbp2	72	62.313	ENSLAFG00000002620	TARBP2	73	88.235	Loxodonta_africana
ENSSLDG00000001835	tarbp2	100	64.208	ENSMFAG00000013567	TARBP2	94	75.676	Macaca_fascicularis
ENSSLDG00000001835	tarbp2	100	64.481	ENSMMUG00000018492	TARBP2	100	64.208	Macaca_mulatta
ENSSLDG00000001835	tarbp2	100	64.208	ENSMNEG00000036477	TARBP2	94	75.676	Macaca_nemestrina
ENSSLDG00000001835	tarbp2	100	64.655	ENSMLEG00000029583	TARBP2	94	75.676	Mandrillus_leucophaeus
ENSSLDG00000001835	tarbp2	96	92.212	ENSMAMG00000010272	tarbp2	97	90.936	Mastacembelus_armatus
ENSSLDG00000001835	tarbp2	100	95.362	ENSMZEG00005006895	tarbp2	100	95.362	Maylandia_zebra
ENSSLDG00000001835	tarbp2	100	64.384	ENSMAUG00000019805	Tarbp2	100	64.208	Mesocricetus_auratus
ENSSLDG00000001835	tarbp2	94	67.826	ENSMICG00000027441	TARBP2	94	75.676	Microcebus_murinus
ENSSLDG00000001835	tarbp2	100	64.658	ENSMOCG00000003691	Tarbp2	100	64.481	Microtus_ochrogaster
ENSSLDG00000001835	tarbp2	94	90.909	ENSMMOG00000010374	tarbp2	100	87.021	Mola_mola
ENSSLDG00000001835	tarbp2	100	95.652	ENSMALG00000009773	tarbp2	100	95.652	Monopterus_albus
ENSSLDG00000001835	tarbp2	100	64.658	MGP_CAROLIEiJ_G0020356	Tarbp2	91	92.453	Mus_caroli
ENSSLDG00000001835	tarbp2	100	64.658	ENSMUSG00000023051	Tarbp2	91	92.453	Mus_musculus
ENSSLDG00000001835	tarbp2	100	64.658	MGP_PahariEiJ_G0020355	Tarbp2	91	92.453	Mus_pahari
ENSSLDG00000001835	tarbp2	100	64.658	MGP_SPRETEiJ_G0021249	Tarbp2	91	92.453	Mus_spretus
ENSSLDG00000001835	tarbp2	100	65.479	ENSMPUG00000005944	TARBP2	100	64.658	Mustela_putorius_furo
ENSSLDG00000001835	tarbp2	100	65.847	ENSMLUG00000010035	TARBP2	100	65.668	Myotis_lucifugus
ENSSLDG00000001835	tarbp2	55	92.941	ENSNBRG00000011845	-	83	95.122	Neolamprologus_brichardi
ENSSLDG00000001835	tarbp2	100	64.481	ENSNLEG00000017690	TARBP2	94	75.676	Nomascus_leucogenys
ENSSLDG00000001835	tarbp2	96	73.817	ENSMEUG00000001916	TARBP2	95	73.817	Notamacropus_eugenii
ENSSLDG00000001835	tarbp2	67	70.536	ENSOPRG00000011397	TARBP2	98	71.946	Ochotona_princeps
ENSSLDG00000001835	tarbp2	60	69.027	ENSODEG00000013413	TARBP2	100	67.841	Octodon_degus
ENSSLDG00000001835	tarbp2	95	90.230	ENSONIG00000005115	tarbp2	96	90.230	Oreochromis_niloticus
ENSSLDG00000001835	tarbp2	100	67.213	ENSOCUG00000005700	TARBP2	100	66.120	Oryctolagus_cuniculus
ENSSLDG00000001835	tarbp2	100	91.884	ENSORLG00000005209	tarbp2	100	91.884	Oryzias_latipes
ENSSLDG00000001835	tarbp2	100	91.594	ENSORLG00020017755	tarbp2	100	91.594	Oryzias_latipes_hni
ENSSLDG00000001835	tarbp2	100	91.884	ENSORLG00015013237	tarbp2	100	91.884	Oryzias_latipes_hsok
ENSSLDG00000001835	tarbp2	100	92.754	ENSOMEG00000018860	tarbp2	100	92.754	Oryzias_melastigma
ENSSLDG00000001835	tarbp2	100	64.770	ENSOGAG00000001744	TARBP2	100	64.481	Otolemur_garnettii
ENSSLDG00000001835	tarbp2	100	65.301	ENSOARG00000016437	TARBP2	100	64.754	Ovis_aries
ENSSLDG00000001835	tarbp2	100	64.481	ENSPPAG00000030429	TARBP2	94	75.676	Pan_paniscus
ENSSLDG00000001835	tarbp2	100	65.574	ENSPPRG00000000189	TARBP2	100	64.754	Panthera_pardus
ENSSLDG00000001835	tarbp2	100	67.318	ENSPTIG00000007859	TARBP2	100	66.947	Panthera_tigris_altaica
ENSSLDG00000001835	tarbp2	100	64.481	ENSPTRG00000005020	TARBP2	94	75.676	Pan_troglodytes
ENSSLDG00000001835	tarbp2	100	64.208	ENSPANG00000010689	TARBP2	94	75.676	Papio_anubis
ENSSLDG00000001835	tarbp2	100	79.775	ENSPKIG00000002455	tarbp2	100	79.213	Paramormyrops_kingsleyae
ENSSLDG00000001835	tarbp2	100	91.304	ENSPMGG00000006497	tarbp2	100	91.304	Periophthalmus_magnuspinnatus
ENSSLDG00000001835	tarbp2	100	63.836	ENSPEMG00000014285	Tarbp2	100	63.661	Peromyscus_maniculatus_bairdii
ENSSLDG00000001835	tarbp2	93	65.894	ENSPMAG00000000105	tarbp2	99	65.232	Petromyzon_marinus
ENSSLDG00000001835	tarbp2	96	73.438	ENSPCIG00000006672	TARBP2	92	68.696	Phascolarctos_cinereus
ENSSLDG00000001835	tarbp2	100	92.174	ENSPFOG00000007586	tarbp2	100	92.174	Poecilia_formosa
ENSSLDG00000001835	tarbp2	100	91.594	ENSPLAG00000017659	tarbp2	100	91.594	Poecilia_latipinna
ENSSLDG00000001835	tarbp2	100	92.174	ENSPMEG00000007775	tarbp2	100	92.174	Poecilia_mexicana
ENSSLDG00000001835	tarbp2	100	91.594	ENSPREG00000007815	tarbp2	100	91.594	Poecilia_reticulata
ENSSLDG00000001835	tarbp2	97	65.680	ENSPPYG00000004583	TARBP2	97	64.638	Pongo_abelii
ENSSLDG00000001835	tarbp2	78	62.887	ENSPCAG00000005352	TARBP2	60	71.493	Procavia_capensis
ENSSLDG00000001835	tarbp2	100	65.574	ENSPCOG00000013102	TARBP2	94	75.676	Propithecus_coquereli
ENSSLDG00000001835	tarbp2	100	65.027	ENSPVAG00000012286	TARBP2	100	64.481	Pteropus_vampyrus
ENSSLDG00000001835	tarbp2	100	95.072	ENSPNYG00000014125	tarbp2	100	95.072	Pundamilia_nyererei
ENSSLDG00000001835	tarbp2	100	85.260	ENSPNAG00000011128	tarbp2	100	84.393	Pygocentrus_nattereri
ENSSLDG00000001835	tarbp2	100	64.384	ENSRNOG00000042355	Tarbp2	100	63.934	Rattus_norvegicus
ENSSLDG00000001835	tarbp2	100	64.481	ENSRBIG00000027150	TARBP2	94	75.676	Rhinopithecus_bieti
ENSSLDG00000001835	tarbp2	100	64.481	ENSRROG00000044783	TARBP2	94	75.676	Rhinopithecus_roxellana
ENSSLDG00000001835	tarbp2	100	64.481	ENSSBOG00000027305	TARBP2	94	75.676	Saimiri_boliviensis_boliviensis
ENSSLDG00000001835	tarbp2	95	73.186	ENSSHAG00000007064	TARBP2	100	73.248	Sarcophilus_harrisii
ENSSLDG00000001835	tarbp2	100	81.058	ENSSFOG00015010784	tarbp2	100	80.168	Scleropages_formosus
ENSSLDG00000001835	tarbp2	100	93.162	ENSSMAG00000012769	tarbp2	100	93.162	Scophthalmus_maximus
ENSSLDG00000001835	tarbp2	100	99.420	ENSSDUG00000018818	tarbp2	100	99.420	Seriola_dumerili
ENSSLDG00000001835	tarbp2	73	77.273	ENSSARG00000001010	TARBP2	67	82.500	Sorex_araneus
ENSSLDG00000001835	tarbp2	96	52.997	ENSSPUG00000005895	TARBP2	94	52.997	Sphenodon_punctatus
ENSSLDG00000001835	tarbp2	100	97.681	ENSSPAG00000022797	tarbp2	100	97.681	Stegastes_partitus
ENSSLDG00000001835	tarbp2	100	65.027	ENSSSCG00000000276	TARBP2	100	66.667	Sus_scrofa
ENSSLDG00000001835	tarbp2	70	56.863	ENSTGUG00000017031	TARBP2	100	54.724	Taeniopygia_guttata
ENSSLDG00000001835	tarbp2	100	93.043	ENSTRUG00000014379	tarbp2	100	93.043	Takifugu_rubripes
ENSSLDG00000001835	tarbp2	100	92.464	ENSTNIG00000007065	tarbp2	100	92.464	Tetraodon_nigroviridis
ENSSLDG00000001835	tarbp2	50	68.047	ENSTBEG00000012751	-	54	69.231	Tupaia_belangeri
ENSSLDG00000001835	tarbp2	100	65.574	ENSTTRG00000017177	TARBP2	100	64.754	Tursiops_truncatus
ENSSLDG00000001835	tarbp2	100	65.301	ENSUAMG00000009011	TARBP2	100	64.754	Ursus_americanus
ENSSLDG00000001835	tarbp2	100	64.754	ENSUMAG00000010461	TARBP2	100	64.208	Ursus_maritimus
ENSSLDG00000001835	tarbp2	100	64.754	ENSVVUG00000028150	TARBP2	100	66.087	Vulpes_vulpes
ENSSLDG00000001835	tarbp2	99	69.143	ENSXETG00000012644	tarbp2	97	69.767	Xenopus_tropicalis
ENSSLDG00000001835	tarbp2	100	92.464	ENSXMAG00000017836	tarbp2	100	92.464	Xiphophorus_maculatus