EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000002031 (Gene tree)
Gene ID: -
Gene Symbol: tsr1
Alias: fc52b09|wu:fc52b09|zgc:123319
Full Name: TSR1%2C ribosome maturation factor
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 10039 bases
Position: chrPEQF01098844.1:226250-236288
Accession: 111656712
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000002508	AARP2CN	PF08142.12	1.2e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000002610	-	3054	XM_023408530	ENSSLDP00000002508	835 (aa)	XP_023264298	UPI000C6FBD53

Gene Model

Click here to download ENSSLDG00000002031's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000002031's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000002031	tsr1	99	54.928	ENSG00000167721	TSR1	99	54.874	Homo_sapiens
ENSSLDG00000002031	tsr1	99	91.388	ENSAPOG00000020891	tsr1	100	91.507	Acanthochromis_polyacanthus
ENSSLDG00000002031	tsr1	99	55.024	ENSAMEG00000007599	TSR1	99	54.436	Ailuropoda_melanoleuca
ENSSLDG00000002031	tsr1	99	87.395	ENSACIG00000007090	tsr1	100	86.315	Amphilophus_citrinellus
ENSSLDG00000002031	tsr1	99	91.957	ENSAOCG00000023284	tsr1	100	92.077	Amphiprion_ocellaris
ENSSLDG00000002031	tsr1	93	92.010	ENSAPEG00000008452	tsr1	100	92.139	Amphiprion_percula
ENSSLDG00000002031	tsr1	99	89.524	ENSATEG00000021961	tsr1	100	89.167	Anabas_testudineus
ENSSLDG00000002031	tsr1	90	58.520	ENSAPLG00000013422	TSR1	99	58.069	Anas_platyrhynchos
ENSSLDG00000002031	tsr1	71	50.836	ENSACAG00000000859	TSR1	92	49.420	Anolis_carolinensis
ENSSLDG00000002031	tsr1	99	55.114	ENSANAG00000031071	TSR1	99	54.850	Aotus_nancymaae
ENSSLDG00000002031	tsr1	100	88.769	ENSACLG00000007595	tsr1	100	88.650	Astatotilapia_calliptera
ENSSLDG00000002031	tsr1	50	76.905	ENSAMXG00000008470	tsr1	90	76.832	Astyanax_mexicanus
ENSSLDG00000002031	tsr1	98	55.301	ENSBTAG00000004225	TSR1	99	56.303	Bos_taurus
ENSSLDG00000002031	tsr1	96	39.461	WBGene00006497	tag-151	96	38.611	Caenorhabditis_elegans
ENSSLDG00000002031	tsr1	66	31.020	WBGene00022021	Y61A9LA.10	51	30.738	Caenorhabditis_elegans
ENSSLDG00000002031	tsr1	97	54.890	ENSCJAG00000012456	TSR1	98	54.623	Callithrix_jacchus
ENSSLDG00000002031	tsr1	99	55.663	ENSCAFG00000002106	-	99	54.286	Canis_familiaris
ENSSLDG00000002031	tsr1	89	53.457	ENSCAFG00000019273	-	100	55.861	Canis_familiaris
ENSSLDG00000002031	tsr1	99	55.542	ENSCAFG00020009728	TSR1	99	54.167	Canis_lupus_dingo
ENSSLDG00000002031	tsr1	99	55.716	ENSCHIG00000023935	TSR1	99	56.595	Capra_hircus
ENSSLDG00000002031	tsr1	99	56.077	ENSTSYG00000005468	TSR1	99	55.569	Carlito_syrichta
ENSSLDG00000002031	tsr1	92	54.663	ENSCPOG00000014833	TSR1	99	55.097	Cavia_porcellus
ENSSLDG00000002031	tsr1	92	54.075	ENSCCAG00000028962	TSR1	98	53.668	Cebus_capucinus
ENSSLDG00000002031	tsr1	99	55.596	ENSCATG00000044262	TSR1	99	54.480	Cercocebus_atys
ENSSLDG00000002031	tsr1	99	55.475	ENSCLAG00000005567	TSR1	99	55.276	Chinchilla_lanigera
ENSSLDG00000002031	tsr1	99	55.716	ENSCSAG00000013788	TSR1	99	54.600	Chlorocebus_sabaeus
ENSSLDG00000002031	tsr1	98	57.576	ENSCPBG00000020363	TSR1	98	56.118	Chrysemys_picta_bellii
ENSSLDG00000002031	tsr1	97	44.284	ENSCING00000020658	-	100	43.932	Ciona_intestinalis
ENSSLDG00000002031	tsr1	95	43.584	ENSCSAVG00000001875	-	100	43.634	Ciona_savignyi
ENSSLDG00000002031	tsr1	88	70.470	ENSCANG00000033056	TSR1	99	51.582	Colobus_angolensis_palliatus
ENSSLDG00000002031	tsr1	99	54.874	ENSCGRG00001023942	Tsr1	99	54.796	Cricetulus_griseus_chok1gshd
ENSSLDG00000002031	tsr1	99	83.413	ENSCSEG00000013009	tsr1	100	83.293	Cynoglossus_semilaevis
ENSSLDG00000002031	tsr1	99	85.439	ENSCVAG00000000506	tsr1	100	85.439	Cyprinodon_variegatus
ENSSLDG00000002031	tsr1	99	75.948	ENSDARG00000007744	tsr1	100	75.948	Danio_rerio
ENSSLDG00000002031	tsr1	99	57.160	ENSDNOG00000004715	TSR1	99	58.228	Dasypus_novemcinctus
ENSSLDG00000002031	tsr1	99	55.355	ENSDORG00000016371	-	99	53.837	Dipodomys_ordii
ENSSLDG00000002031	tsr1	95	49.000	ENSDORG00000023234	-	99	46.891	Dipodomys_ordii
ENSSLDG00000002031	tsr1	96	43.827	FBgn0037073	Tsr1	96	43.032	Drosophila_melanogaster
ENSSLDG00000002031	tsr1	89	67.974	ENSETEG00000017534	TSR1	89	67.974	Echinops_telfairi
ENSSLDG00000002031	tsr1	94	52.091	ENSEBUG00000013731	TSR1	97	51.458	Eptatretus_burgeri
ENSSLDG00000002031	tsr1	99	55.475	ENSEASG00005009302	TSR1	97	56.197	Equus_asinus_asinus
ENSSLDG00000002031	tsr1	99	55.422	ENSECAG00000009114	TSR1	99	56.145	Equus_caballus
ENSSLDG00000002031	tsr1	100	76.996	ENSELUG00000020984	tsr1	96	76.996	Esox_lucius
ENSSLDG00000002031	tsr1	99	54.458	ENSFCAG00000006313	TSR1	99	54.567	Felis_catus
ENSSLDG00000002031	tsr1	99	57.976	ENSFALG00000006532	TSR1	99	56.975	Ficedula_albicollis
ENSSLDG00000002031	tsr1	99	55.181	ENSFDAG00000006038	TSR1	99	55.102	Fukomys_damarensis
ENSSLDG00000002031	tsr1	100	85.442	ENSFHEG00000003626	tsr1	100	85.561	Fundulus_heteroclitus
ENSSLDG00000002031	tsr1	99	74.552	ENSGMOG00000010336	tsr1	100	72.879	Gadus_morhua
ENSSLDG00000002031	tsr1	100	84.229	ENSGAFG00000012993	tsr1	100	83.751	Gambusia_affinis
ENSSLDG00000002031	tsr1	99	84.542	ENSGACG00000010843	tsr1	100	84.423	Gasterosteus_aculeatus
ENSSLDG00000002031	tsr1	98	57.333	ENSGAGG00000025619	-	99	56.130	Gopherus_agassizii
ENSSLDG00000002031	tsr1	99	55.475	ENSGGOG00000001704	TSR1	99	55.114	Gorilla_gorilla
ENSSLDG00000002031	tsr1	100	89.128	ENSHBUG00000017904	tsr1	100	88.411	Haplochromis_burtoni
ENSSLDG00000002031	tsr1	96	49.066	ENSHGLG00000015688	-	98	48.130	Heterocephalus_glaber_female
ENSSLDG00000002031	tsr1	99	55.995	ENSHGLG00000012806	-	99	55.755	Heterocephalus_glaber_female
ENSSLDG00000002031	tsr1	99	55.995	ENSHGLG00100015392	TSR1	99	55.755	Heterocephalus_glaber_male
ENSSLDG00000002031	tsr1	99	82.713	ENSHCOG00000001432	tsr1	100	82.593	Hippocampus_comes
ENSSLDG00000002031	tsr1	99	76.253	ENSIPUG00000004618	tsr1	100	75.537	Ictalurus_punctatus
ENSSLDG00000002031	tsr1	99	56.333	ENSSTOG00000011819	TSR1	99	55.928	Ictidomys_tridecemlineatus
ENSSLDG00000002031	tsr1	91	53.272	ENSJJAG00000019505	Tsr1	95	52.151	Jaculus_jaculus
ENSSLDG00000002031	tsr1	100	84.809	ENSKMAG00000005763	tsr1	100	84.809	Kryptolebias_marmoratus
ENSSLDG00000002031	tsr1	100	89.154	ENSLBEG00000021823	tsr1	100	89.750	Labrus_bergylta
ENSSLDG00000002031	tsr1	98	58.223	ENSLACG00000002197	TSR1	99	57.143	Latimeria_chalumnae
ENSSLDG00000002031	tsr1	93	80.263	ENSLOCG00000006491	TSR1	99	80.263	Lepisosteus_oculatus
ENSSLDG00000002031	tsr1	99	55.836	ENSMFAG00000021330	TSR1	99	54.719	Macaca_fascicularis
ENSSLDG00000002031	tsr1	99	55.716	ENSMMUG00000017519	TSR1	99	54.600	Macaca_mulatta
ENSSLDG00000002031	tsr1	99	55.836	ENSMNEG00000031382	TSR1	99	54.719	Macaca_nemestrina
ENSSLDG00000002031	tsr1	99	55.475	ENSMLEG00000036733	TSR1	99	54.361	Mandrillus_leucophaeus
ENSSLDG00000002031	tsr1	100	88.612	ENSMAMG00000017918	tsr1	100	88.968	Mastacembelus_armatus
ENSSLDG00000002031	tsr1	99	88.278	ENSMZEG00005007477	tsr1	100	87.679	Maylandia_zebra
ENSSLDG00000002031	tsr1	99	57.669	ENSMGAG00000005576	TSR1	100	56.655	Meleagris_gallopavo
ENSSLDG00000002031	tsr1	99	56.212	ENSMICG00000012943	TSR1	99	56.971	Microcebus_murinus
ENSSLDG00000002031	tsr1	99	54.970	ENSMOCG00000022764	Tsr1	99	54.773	Microtus_ochrogaster
ENSSLDG00000002031	tsr1	99	88.129	ENSMMOG00000014280	tsr1	100	88.129	Mola_mola
ENSSLDG00000002031	tsr1	97	57.664	ENSMODG00000010658	TSR1	99	57.506	Monodelphis_domestica
ENSSLDG00000002031	tsr1	99	88.503	ENSMALG00000011681	tsr1	100	88.623	Monopterus_albus
ENSSLDG00000002031	tsr1	99	54.392	MGP_CAROLIEiJ_G0016727	Tsr1	99	54.077	Mus_caroli
ENSSLDG00000002031	tsr1	99	55.114	ENSMUSG00000038335	Tsr1	99	54.688	Mus_musculus
ENSSLDG00000002031	tsr1	99	55.368	MGP_PahariEiJ_G0017864	Tsr1	99	55.048	Mus_pahari
ENSSLDG00000002031	tsr1	99	55.006	MGP_SPRETEiJ_G0017570	Tsr1	99	54.688	Mus_spretus
ENSSLDG00000002031	tsr1	81	58.504	ENSMPUG00000013000	TSR1	100	56.936	Mustela_putorius_furo
ENSSLDG00000002031	tsr1	99	56.318	ENSMLUG00000003505	TSR1	99	55.740	Myotis_lucifugus
ENSSLDG00000002031	tsr1	100	89.367	ENSNBRG00000020728	tsr1	100	89.247	Neolamprologus_brichardi
ENSSLDG00000002031	tsr1	99	51.030	ENSNLEG00000017184	TSR1	96	66.857	Nomascus_leucogenys
ENSSLDG00000002031	tsr1	98	52.885	ENSMEUG00000015828	TSR1	99	52.934	Notamacropus_eugenii
ENSSLDG00000002031	tsr1	99	88.292	ENSONIG00000013131	tsr1	100	88.172	Oreochromis_niloticus
ENSSLDG00000002031	tsr1	99	55.368	ENSOCUG00000014256	TSR1	99	55.769	Oryctolagus_cuniculus
ENSSLDG00000002031	tsr1	100	85.646	ENSORLG00000004926	tsr1	100	85.646	Oryzias_latipes
ENSSLDG00000002031	tsr1	100	84.928	ENSORLG00020008792	tsr1	100	84.928	Oryzias_latipes_hni
ENSSLDG00000002031	tsr1	100	85.646	ENSORLG00015013838	tsr1	100	85.646	Oryzias_latipes_hsok
ENSSLDG00000002031	tsr1	100	84.248	ENSOMEG00000004830	tsr1	100	84.487	Oryzias_melastigma
ENSSLDG00000002031	tsr1	99	55.251	ENSOGAG00000004492	TSR1	99	55.370	Otolemur_garnettii
ENSSLDG00000002031	tsr1	99	55.716	ENSOARG00000015437	TSR1	97	56.595	Ovis_aries
ENSSLDG00000002031	tsr1	99	54.928	ENSPPAG00000036355	TSR1	99	54.874	Pan_paniscus
ENSSLDG00000002031	tsr1	99	54.217	ENSPPRG00000015519	-	99	54.611	Panthera_pardus
ENSSLDG00000002031	tsr1	99	54.217	ENSPTIG00000010608	TSR1	99	54.611	Panthera_tigris_altaica
ENSSLDG00000002031	tsr1	99	54.928	ENSPTRG00000008547	TSR1	99	54.874	Pan_troglodytes
ENSSLDG00000002031	tsr1	99	53.430	ENSPANG00000024463	TSR1	99	52.033	Papio_anubis
ENSSLDG00000002031	tsr1	99	72.934	ENSPKIG00000013972	tsr1	100	72.335	Paramormyrops_kingsleyae
ENSSLDG00000002031	tsr1	87	57.045	ENSPSIG00000018258	TSR1	99	56.250	Pelodiscus_sinensis
ENSSLDG00000002031	tsr1	99	82.953	ENSPMGG00000011577	tsr1	99	82.310	Periophthalmus_magnuspinnatus
ENSSLDG00000002031	tsr1	99	54.524	ENSPEMG00000018033	Tsr1	99	54.077	Peromyscus_maniculatus_bairdii
ENSSLDG00000002031	tsr1	98	56.731	ENSPCIG00000009357	TSR1	97	57.228	Phascolarctos_cinereus
ENSSLDG00000002031	tsr1	99	83.612	ENSPFOG00000004483	TSR1	100	80.756	Poecilia_formosa
ENSSLDG00000002031	tsr1	100	84.167	ENSPLAG00000022320	tsr1	100	83.929	Poecilia_latipinna
ENSSLDG00000002031	tsr1	100	84.643	ENSPMEG00000004577	tsr1	100	84.167	Poecilia_mexicana
ENSSLDG00000002031	tsr1	97	84.191	ENSPREG00000010354	tsr1	99	82.646	Poecilia_reticulata
ENSSLDG00000002031	tsr1	99	50.716	ENSPPYG00000007792	TSR1	99	50.000	Pongo_abelii
ENSSLDG00000002031	tsr1	51	67.442	ENSPCAG00000012973	-	69	67.500	Procavia_capensis
ENSSLDG00000002031	tsr1	99	55.247	ENSPCOG00000017928	TSR1	99	55.542	Propithecus_coquereli
ENSSLDG00000002031	tsr1	99	55.836	ENSPVAG00000002162	TSR1	99	55.995	Pteropus_vampyrus
ENSSLDG00000002031	tsr1	100	89.008	ENSPNYG00000016163	tsr1	100	88.889	Pundamilia_nyererei
ENSSLDG00000002031	tsr1	99	76.886	ENSPNAG00000008659	tsr1	99	76.647	Pygocentrus_nattereri
ENSSLDG00000002031	tsr1	99	54.699	ENSRNOG00000002980	Tsr1	99	54.567	Rattus_norvegicus
ENSSLDG00000002031	tsr1	99	55.836	ENSRBIG00000040016	TSR1	99	55.635	Rhinopithecus_bieti
ENSSLDG00000002031	tsr1	99	55.716	ENSRROG00000030361	TSR1	99	55.516	Rhinopithecus_roxellana
ENSSLDG00000002031	tsr1	99	55.355	ENSSBOG00000020785	TSR1	99	55.716	Saimiri_boliviensis_boliviensis
ENSSLDG00000002031	tsr1	98	57.725	ENSSHAG00000011394	TSR1	99	57.006	Sarcophilus_harrisii
ENSSLDG00000002031	tsr1	99	76.351	ENSSFOG00015005455	tsr1	100	76.230	Scleropages_formosus
ENSSLDG00000002031	tsr1	99	89.568	ENSSMAG00000009504	tsr1	100	89.808	Scophthalmus_maximus
ENSSLDG00000002031	tsr1	100	98.807	ENSSDUG00000012074	tsr1	100	98.807	Seriola_dumerili
ENSSLDG00000002031	tsr1	92	57.143	ENSSARG00000000759	TSR1	93	57.143	Sorex_araneus
ENSSLDG00000002031	tsr1	99	57.969	ENSSPUG00000007042	TSR1	100	56.959	Sphenodon_punctatus
ENSSLDG00000002031	tsr1	99	91.657	ENSSPAG00000021951	tsr1	100	91.299	Stegastes_partitus
ENSSLDG00000002031	tsr1	99	55.596	ENSSSCG00000038534	TSR1	99	56.475	Sus_scrofa
ENSSLDG00000002031	tsr1	89	60.265	ENSTGUG00000005883	TSR1	100	58.716	Taeniopygia_guttata
ENSSLDG00000002031	tsr1	99	85.114	ENSTRUG00000004665	tsr1	100	85.114	Takifugu_rubripes
ENSSLDG00000002031	tsr1	99	85.230	ENSTNIG00000016196	tsr1	100	83.976	Tetraodon_nigroviridis
ENSSLDG00000002031	tsr1	66	72.308	ENSTBEG00000015275	-	66	72.308	Tupaia_belangeri
ENSSLDG00000002031	tsr1	99	55.596	ENSTTRG00000001177	TSR1	99	56.355	Tursiops_truncatus
ENSSLDG00000002031	tsr1	99	55.114	ENSUAMG00000025160	TSR1	99	54.952	Ursus_americanus
ENSSLDG00000002031	tsr1	95	55.087	ENSUMAG00000009294	TSR1	98	54.244	Ursus_maritimus
ENSSLDG00000002031	tsr1	83	49.284	ENSVPAG00000000228	TSR1	99	48.153	Vicugna_pacos
ENSSLDG00000002031	tsr1	99	55.542	ENSVVUG00000021767	TSR1	99	54.286	Vulpes_vulpes
ENSSLDG00000002031	tsr1	99	53.325	ENSXETG00000023797	tsr1	100	52.794	Xenopus_tropicalis
ENSSLDG00000002031	tsr1	99	83.213	ENSXCOG00000009635	tsr1	100	81.981	Xiphophorus_couchianus
ENSSLDG00000002031	tsr1	100	84.091	ENSXMAG00000001397	tsr1	97	83.971	Xiphophorus_maculatus