EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000002034 (Gene tree)
Gene ID: -
Gene Symbol: mrps18c
Alias: si:ch211-85e10.6
Full Name: mitochondrial ribosomal protein S18C
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 955 bases
Position: chrPEQF01094204.1:2385-3339
Accession: 111648934
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000002544	Ribosomal_S18	PF01084.20	1.7e-22	1	1
ENSSLDP00000002561	Ribosomal_S18	PF01084.20	5.5e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000002670	-	345	-	ENSSLDP00000002561	114 (aa)	-	-
ENSSLDT00000002653	-	390	XM_023398686	ENSSLDP00000002544	129 (aa)	XP_023254454	-

Gene Model

Click here to download ENSSLDG00000002034's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000002034's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000002034	mrps18c	94	73.171	ENSAPOG00000019045	mrps18c	87	73.171	Acanthochromis_polyacanthus
ENSSLDG00000002034	mrps18c	71	78.261	ENSACIG00000020253	mrps18c	91	78.261	Amphilophus_citrinellus
ENSSLDG00000002034	mrps18c	94	69.919	ENSAOCG00000014338	mrps18c	87	69.919	Amphiprion_ocellaris
ENSSLDG00000002034	mrps18c	67	87.356	ENSAPEG00000023068	-	87	83.696	Amphiprion_percula
ENSSLDG00000002034	mrps18c	94	69.919	ENSAPEG00000022956	mrps18c	87	69.919	Amphiprion_percula
ENSSLDG00000002034	mrps18c	93	70.492	ENSATEG00000023417	mrps18c	86	70.492	Anabas_testudineus
ENSSLDG00000002034	mrps18c	69	67.416	ENSAPLG00000012544	-	86	67.416	Anas_platyrhynchos
ENSSLDG00000002034	mrps18c	71	86.957	ENSACLG00000010521	mrps18c	90	86.957	Astatotilapia_calliptera
ENSSLDG00000002034	mrps18c	71	76.923	ENSAMXG00000012238	mrps18c	92	76.923	Astyanax_mexicanus
ENSSLDG00000002034	mrps18c	69	69.663	ENSCPBG00000007783	-	55	69.663	Chrysemys_picta_bellii
ENSSLDG00000002034	mrps18c	71	82.418	ENSCSEG00000000711	mrps18c	97	55.752	Cynoglossus_semilaevis
ENSSLDG00000002034	mrps18c	91	64.754	ENSCVAG00000020169	mrps18c	96	64.754	Cyprinodon_variegatus
ENSSLDG00000002034	mrps18c	69	76.404	ENSDARG00000069624	mrps18c	65	76.404	Danio_rerio
ENSSLDG00000002034	mrps18c	91	64.706	ENSELUG00000024603	mrps18c	82	64.706	Esox_lucius
ENSSLDG00000002034	mrps18c	93	68.333	ENSFHEG00000015550	mrps18c	81	68.333	Fundulus_heteroclitus
ENSSLDG00000002034	mrps18c	93	68.333	ENSFHEG00000018752	-	86	68.333	Fundulus_heteroclitus
ENSSLDG00000002034	mrps18c	69	65.169	ENSGALG00000023191	MRPS18C	62	65.169	Gallus_gallus
ENSSLDG00000002034	mrps18c	90	66.379	ENSGAFG00000008048	mrps18c	68	66.379	Gambusia_affinis
ENSSLDG00000002034	mrps18c	69	69.663	ENSGAGG00000015144	-	63	69.663	Gopherus_agassizii
ENSSLDG00000002034	mrps18c	71	86.957	ENSHBUG00000002008	mrps18c	71	86.957	Haplochromis_burtoni
ENSSLDG00000002034	mrps18c	71	83.696	ENSHCOG00000013161	mrps18c	70	83.696	Hippocampus_comes
ENSSLDG00000002034	mrps18c	71	76.923	ENSIPUG00000003783	mrps18c	88	76.923	Ictalurus_punctatus
ENSSLDG00000002034	mrps18c	90	72.414	ENSKMAG00000016467	mrps18c	83	72.414	Kryptolebias_marmoratus
ENSSLDG00000002034	mrps18c	98	67.188	ENSLBEG00000019174	mrps18c	91	67.188	Labrus_bergylta
ENSSLDG00000002034	mrps18c	98	67.188	ENSLBEG00000021861	mrps18c	91	67.188	Labrus_bergylta
ENSSLDG00000002034	mrps18c	89	58.974	ENSLACG00000011243	mrps18c	84	58.974	Latimeria_chalumnae
ENSSLDG00000002034	mrps18c	74	69.792	ENSLOCG00000012115	mrps18c	71	69.792	Lepisosteus_oculatus
ENSSLDG00000002034	mrps18c	91	75.424	ENSMAMG00000012386	mrps18c	85	75.424	Mastacembelus_armatus
ENSSLDG00000002034	mrps18c	71	86.957	ENSMZEG00005023278	mrps18c	71	86.957	Maylandia_zebra
ENSSLDG00000002034	mrps18c	73	86.170	ENSMMOG00000011316	mrps18c	72	86.170	Mola_mola
ENSSLDG00000002034	mrps18c	71	86.957	ENSNBRG00000006182	mrps18c	71	86.957	Neolamprologus_brichardi
ENSSLDG00000002034	mrps18c	69	68.539	ENSMEUG00000010972	-	70	68.539	Notamacropus_eugenii
ENSSLDG00000002034	mrps18c	71	86.957	ENSONIG00000012527	mrps18c	91	86.957	Oreochromis_niloticus
ENSSLDG00000002034	mrps18c	94	66.116	ENSORLG00015006869	mrps18c	87	66.116	Oryzias_latipes_hsok
ENSSLDG00000002034	mrps18c	69	74.157	ENSOMEG00000005009	mrps18c	86	74.157	Oryzias_melastigma
ENSSLDG00000002034	mrps18c	91	64.407	ENSPKIG00000021736	mrps18c	79	64.407	Paramormyrops_kingsleyae
ENSSLDG00000002034	mrps18c	75	80.412	ENSPMGG00000002991	mrps18c	98	80.412	Periophthalmus_magnuspinnatus
ENSSLDG00000002034	mrps18c	90	65.517	ENSPFOG00000002351	mrps18c	68	65.517	Poecilia_formosa
ENSSLDG00000002034	mrps18c	90	65.517	ENSPLAG00000015187	mrps18c	83	65.517	Poecilia_latipinna
ENSSLDG00000002034	mrps18c	93	64.167	ENSPMEG00000014488	mrps18c	71	64.167	Poecilia_mexicana
ENSSLDG00000002034	mrps18c	64	78.313	ENSPREG00000012593	mrps18c	85	78.313	Poecilia_reticulata
ENSSLDG00000002034	mrps18c	71	85.870	ENSPNYG00000010654	mrps18c	71	85.870	Pundamilia_nyererei
ENSSLDG00000002034	mrps18c	71	78.022	ENSPNAG00000009350	mrps18c	85	78.022	Pygocentrus_nattereri
ENSSLDG00000002034	mrps18c	91	65.833	ENSSFOG00015019444	mrps18c	81	65.833	Scleropages_formosus
ENSSLDG00000002034	mrps18c	93	86.667	ENSSDUG00000015676	mrps18c	86	86.667	Seriola_dumerili
ENSSLDG00000002034	mrps18c	67	67.816	ENSSPUG00000013990	-	64	67.816	Sphenodon_punctatus
ENSSLDG00000002034	mrps18c	93	67.213	ENSSPAG00000008687	mrps18c	86	67.213	Stegastes_partitus
ENSSLDG00000002034	mrps18c	71	80.435	ENSTRUG00000024403	mrps18c	71	80.435	Takifugu_rubripes
ENSSLDG00000002034	mrps18c	93	71.311	ENSTNIG00000005674	mrps18c	86	71.311	Tetraodon_nigroviridis
ENSSLDG00000002034	mrps18c	84	53.125	ENSXETG00000027597	mrps18c	64	71.429	Xenopus_tropicalis
ENSSLDG00000002034	mrps18c	91	64.957	ENSXCOG00000016208	mrps18c	89	78.652	Xiphophorus_couchianus
ENSSLDG00000002034	mrps18c	90	67.241	ENSXMAG00000012555	mrps18c	68	67.241	Xiphophorus_maculatus