EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000002178 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 5130 bases
Position: chrPEQF01099139.1:962573-967702
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000002724	TUDOR	PF00567.24	7.5e-147	1	7
ENSSLDP00000002724	TUDOR	PF00567.24	7.5e-147	2	7
ENSSLDP00000002724	TUDOR	PF00567.24	7.5e-147	3	7
ENSSLDP00000002724	TUDOR	PF00567.24	7.5e-147	4	7
ENSSLDP00000002724	TUDOR	PF00567.24	7.5e-147	5	7
ENSSLDP00000002724	TUDOR	PF00567.24	7.5e-147	6	7
ENSSLDP00000002724	TUDOR	PF00567.24	7.5e-147	7	7

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000002834	-	5130	-	ENSSLDP00000002724	1709 (aa)	-	-

Gene Model

Click here to download ENSSLDG00000002178's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000002178's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000002178	-	91	47.356	ENSSLDG00000004470	tdrd6	71	34.046

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000002178	-	99	31.507	ENSG00000180113	TDRD6	82	31.507	Homo_sapiens
ENSSLDG00000002178	-	93	38.693	ENSAPOG00000023805	tdrd6	82	38.693	Acanthochromis_polyacanthus
ENSSLDG00000002178	-	99	63.716	ENSAPOG00000020893	-	99	63.716	Acanthochromis_polyacanthus
ENSSLDG00000002178	-	97	46.400	ENSACIG00000012633	-	98	31.129	Amphilophus_citrinellus
ENSSLDG00000002178	-	99	65.217	ENSACIG00000009194	-	100	65.217	Amphilophus_citrinellus
ENSSLDG00000002178	-	93	38.308	ENSAOCG00000013365	tdrd6	69	38.308	Amphiprion_ocellaris
ENSSLDG00000002178	-	99	62.792	ENSAOCG00000017073	-	100	62.734	Amphiprion_ocellaris
ENSSLDG00000002178	-	99	63.094	ENSAPEG00000011090	-	98	63.094	Amphiprion_percula
ENSSLDG00000002178	-	93	38.806	ENSAPEG00000015328	tdrd6	81	38.806	Amphiprion_percula
ENSSLDG00000002178	-	99	44.712	ENSATEG00000016586	tdrd6	82	44.712	Anabas_testudineus
ENSSLDG00000002178	-	99	66.207	ENSATEG00000001389	si:ch211-189e2.3	99	66.207	Anabas_testudineus
ENSSLDG00000002178	-	99	31.954	ENSANAG00000004725	TDRD6	83	31.954	Aotus_nancymaae
ENSSLDG00000002178	-	99	62.588	ENSACLG00000003092	-	99	62.588	Astatotilapia_calliptera
ENSSLDG00000002178	-	94	44.893	ENSACLG00000007717	-	83	44.893	Astatotilapia_calliptera
ENSSLDG00000002178	-	92	41.117	ENSAMXG00000032110	si:ch211-189e2.3	99	42.132	Astyanax_mexicanus
ENSSLDG00000002178	-	93	39.583	ENSAMXG00000010029	tdrd6	72	33.488	Astyanax_mexicanus
ENSSLDG00000002178	-	99	32.653	ENSCJAG00000012035	TDRD6	83	32.653	Callithrix_jacchus
ENSSLDG00000002178	-	99	32.957	ENSCHIG00000012400	TDRD6	81	32.957	Capra_hircus
ENSSLDG00000002178	-	99	32.265	ENSCCAG00000027454	TDRD6	85	32.265	Cebus_capucinus
ENSSLDG00000002178	-	99	32.037	ENSCATG00000023914	TDRD6	82	32.037	Cercocebus_atys
ENSSLDG00000002178	-	99	32.265	ENSCSAG00000012578	TDRD6	81	32.265	Chlorocebus_sabaeus
ENSSLDG00000002178	-	87	35.354	ENSCHOG00000000169	TDRD6	70	35.354	Choloepus_hoffmanni
ENSSLDG00000002178	-	99	31.828	ENSCANG00000030562	TDRD6	83	31.828	Colobus_angolensis_palliatus
ENSSLDG00000002178	-	94	40.253	ENSCSEG00000019023	tdrd6	75	40.441	Cynoglossus_semilaevis
ENSSLDG00000002178	-	99	59.211	ENSCSEG00000003495	-	100	59.211	Cynoglossus_semilaevis
ENSSLDG00000002178	-	99	34.828	ENSDARG00000070052	tdrd6	77	34.828	Danio_rerio
ENSSLDG00000002178	-	99	36.090	ENSDARG00000089954	si:ch211-189e2.3	92	35.833	Danio_rerio
ENSSLDG00000002178	-	99	33.790	ENSDORG00000023218	Tdrd6	78	33.790	Dipodomys_ordii
ENSSLDG00000002178	-	99	33.710	ENSETEG00000015260	TDRD6	81	33.710	Echinops_telfairi
ENSSLDG00000002178	-	99	50.000	ENSELUG00000010350	tdrd6	74	50.000	Esox_lucius
ENSSLDG00000002178	-	99	39.530	ENSELUG00000018873	-	99	37.412	Esox_lucius
ENSSLDG00000002178	-	100	32.574	ENSFCAG00000023001	TDRD6	81	32.574	Felis_catus
ENSSLDG00000002178	-	93	32.737	ENSFALG00000001522	TDRD6	69	32.737	Ficedula_albicollis
ENSSLDG00000002178	-	99	39.062	ENSFHEG00000022915	tdrd6	77	41.558	Fundulus_heteroclitus
ENSSLDG00000002178	-	58	52.469	ENSGMOG00000012765	-	99	52.469	Gadus_morhua
ENSSLDG00000002178	-	85	46.988	ENSGMOG00000005132	tdrd6	100	46.988	Gadus_morhua
ENSSLDG00000002178	-	99	32.136	ENSGAFG00000009328	tdrd6	78	32.136	Gambusia_affinis
ENSSLDG00000002178	-	99	44.706	ENSGACG00000004820	tdrd6	99	44.706	Gasterosteus_aculeatus
ENSSLDG00000002178	-	99	31.350	ENSGGOG00000012971	TDRD6	83	31.350	Gorilla_gorilla
ENSSLDG00000002178	-	99	35.938	ENSHBUG00000012579	tdrd6	79	31.058	Haplochromis_burtoni
ENSSLDG00000002178	-	99	62.646	ENSHBUG00000000351	-	99	62.646	Haplochromis_burtoni
ENSSLDG00000002178	-	88	36.538	ENSHGLG00000019324	TDRD6	77	36.538	Heterocephalus_glaber_female
ENSSLDG00000002178	-	88	36.538	ENSHGLG00100006669	TDRD6	77	36.538	Heterocephalus_glaber_male
ENSSLDG00000002178	-	98	42.169	ENSHCOG00000019950	tdrd6	83	42.169	Hippocampus_comes
ENSSLDG00000002178	-	99	55.660	ENSHCOG00000017328	-	99	55.660	Hippocampus_comes
ENSSLDG00000002178	-	93	33.065	ENSIPUG00000023805	tdrd6	77	41.546	Ictalurus_punctatus
ENSSLDG00000002178	-	99	32.494	ENSSTOG00000028193	TDRD6	81	32.494	Ictidomys_tridecemlineatus
ENSSLDG00000002178	-	70	41.772	ENSKMAG00000003969	-	91	41.772	Kryptolebias_marmoratus
ENSSLDG00000002178	-	99	57.986	ENSKMAG00000015790	-	99	57.986	Kryptolebias_marmoratus
ENSSLDG00000002178	-	99	64.302	ENSLBEG00000004565	-	100	64.302	Labrus_bergylta
ENSSLDG00000002178	-	99	46.875	ENSLBEG00000022955	tdrd6	84	46.875	Labrus_bergylta
ENSSLDG00000002178	-	98	45.055	ENSLOCG00000016482	tdrd6	99	45.055	Lepisosteus_oculatus
ENSSLDG00000002178	-	99	31.579	ENSMFAG00000002656	TDRD6	83	31.579	Macaca_fascicularis
ENSSLDG00000002178	-	99	31.579	ENSMMUG00000019252	TDRD6	82	31.579	Macaca_mulatta
ENSSLDG00000002178	-	99	31.579	ENSMNEG00000039397	TDRD6	83	31.579	Macaca_nemestrina
ENSSLDG00000002178	-	91	32.867	ENSMLEG00000039418	TDRD6	80	32.867	Mandrillus_leucophaeus
ENSSLDG00000002178	-	99	69.593	ENSMAMG00000000227	-	99	69.593	Mastacembelus_armatus
ENSSLDG00000002178	-	93	46.506	ENSMAMG00000007725	tdrd6	81	46.506	Mastacembelus_armatus
ENSSLDG00000002178	-	99	62.646	ENSMZEG00005012754	-	99	62.646	Maylandia_zebra
ENSSLDG00000002178	-	94	44.893	ENSMZEG00005003573	tdrd6	78	44.893	Maylandia_zebra
ENSSLDG00000002178	-	90	32.000	ENSMGAG00000014281	-	74	32.000	Meleagris_gallopavo
ENSSLDG00000002178	-	99	33.105	ENSMOCG00000005983	Tdrd6	81	33.105	Microtus_ochrogaster
ENSSLDG00000002178	-	99	31.657	ENSMMOG00000015651	tdrd6	85	31.927	Mola_mola
ENSSLDG00000002178	-	99	35.965	ENSMALG00000019679	tdrd6	79	35.965	Monopterus_albus
ENSSLDG00000002178	-	99	69.467	ENSMALG00000019184	-	100	69.467	Monopterus_albus
ENSSLDG00000002178	-	99	33.257	MGP_CAROLIEiJ_G0021632	Tdrd6	81	33.257	Mus_caroli
ENSSLDG00000002178	-	99	33.030	ENSMUSG00000040140	Tdrd6	81	33.030	Mus_musculus
ENSSLDG00000002178	-	99	33.030	MGP_SPRETEiJ_G0022544	Tdrd6	81	33.030	Mus_spretus
ENSSLDG00000002178	-	99	32.955	ENSMLUG00000015316	TDRD6	81	32.955	Myotis_lucifugus
ENSSLDG00000002178	-	99	58.154	ENSNBRG00000007041	-	100	58.154	Neolamprologus_brichardi
ENSSLDG00000002178	-	89	44.418	ENSNBRG00000018258	tdrd6	90	44.418	Neolamprologus_brichardi
ENSSLDG00000002178	-	99	30.856	ENSNLEG00000004513	TDRD6	83	30.856	Nomascus_leucogenys
ENSSLDG00000002178	-	99	33.784	ENSMEUG00000014304	TDRD6	76	30.380	Notamacropus_eugenii
ENSSLDG00000002178	-	99	35.156	ENSONIG00000001218	tdrd6	99	31.244	Oreochromis_niloticus
ENSSLDG00000002178	-	99	33.257	ENSOCUG00000000760	TDRD6	80	30.380	Oryctolagus_cuniculus
ENSSLDG00000002178	-	97	31.070	ENSORLG00000015951	amh	68	31.300	Oryzias_latipes
ENSSLDG00000002178	-	97	31.530	ENSORLG00020005897	amh	55	31.530	Oryzias_latipes_hni
ENSSLDG00000002178	-	97	31.530	ENSORLG00015001382	amh	63	34.508	Oryzias_latipes_hsok
ENSSLDG00000002178	-	99	33.778	ENSOMEG00000014481	tdrd6	79	33.778	Oryzias_melastigma
ENSSLDG00000002178	-	100	33.030	ENSOGAG00000000404	TDRD6	82	33.030	Otolemur_garnettii
ENSSLDG00000002178	-	93	32.628	ENSOARG00000010906	TDRD6	79	33.865	Ovis_aries
ENSSLDG00000002178	-	94	32.420	ENSPPRG00000007625	TDRD6	81	32.420	Panthera_pardus
ENSSLDG00000002178	-	95	36.364	ENSPTIG00000013853	TDRD6	79	36.364	Panthera_tigris_altaica
ENSSLDG00000002178	-	99	31.350	ENSPTRG00000018237	TDRD6	83	31.350	Pan_troglodytes
ENSSLDG00000002178	-	99	31.808	ENSPANG00000005761	TDRD6	83	31.808	Papio_anubis
ENSSLDG00000002178	-	91	47.938	ENSPKIG00000012265	tdrd6	79	47.938	Paramormyrops_kingsleyae
ENSSLDG00000002178	-	99	49.246	ENSPMGG00000000674	-	99	49.246	Periophthalmus_magnuspinnatus
ENSSLDG00000002178	-	99	32.840	ENSPMGG00000014626	tdrd6	99	32.840	Periophthalmus_magnuspinnatus
ENSSLDG00000002178	-	99	32.960	ENSPCIG00000027676	TDRD6	77	32.960	Phascolarctos_cinereus
ENSSLDG00000002178	-	99	39.362	ENSPFOG00000012487	tdrd6	99	38.608	Poecilia_formosa
ENSSLDG00000002178	-	99	39.130	ENSPLAG00000020472	tdrd6	71	39.130	Poecilia_latipinna
ENSSLDG00000002178	-	99	39.362	ENSPMEG00000000075	tdrd6	75	39.362	Poecilia_mexicana
ENSSLDG00000002178	-	99	39.130	ENSPREG00000018829	tdrd6	76	39.130	Poecilia_reticulata
ENSSLDG00000002178	-	98	32.546	ENSPCAG00000012381	TDRD6	66	32.546	Procavia_capensis
ENSSLDG00000002178	-	99	33.180	ENSPCOG00000011534	TDRD6	83	33.180	Propithecus_coquereli
ENSSLDG00000002178	-	92	40.104	ENSPNYG00000021847	tdrd6	87	39.796	Pundamilia_nyererei
ENSSLDG00000002178	-	99	63.428	ENSPNYG00000008466	-	100	63.428	Pundamilia_nyererei
ENSSLDG00000002178	-	99	34.843	ENSPNAG00000008860	tdrd6	86	34.994	Pygocentrus_nattereri
ENSSLDG00000002178	-	99	42.654	ENSPNAG00000000359	si:ch211-189e2.3	93	42.654	Pygocentrus_nattereri
ENSSLDG00000002178	-	99	31.818	ENSRBIG00000030252	TDRD6	83	31.818	Rhinopithecus_bieti
ENSSLDG00000002178	-	99	31.818	ENSRROG00000043964	TDRD6	83	31.818	Rhinopithecus_roxellana
ENSSLDG00000002178	-	99	31.808	ENSSBOG00000031889	TDRD6	85	32.192	Saimiri_boliviensis_boliviensis
ENSSLDG00000002178	-	99	30.252	ENSSHAG00000016901	TDRD6	78	30.380	Sarcophilus_harrisii
ENSSLDG00000002178	-	98	49.057	ENSSFOG00015014356	tdrd6	77	34.783	Scleropages_formosus
ENSSLDG00000002178	-	99	71.930	ENSSMAG00000014450	-	99	71.930	Scophthalmus_maximus
ENSSLDG00000002178	-	99	31.927	ENSSMAG00000004490	tdrd6	85	31.927	Scophthalmus_maximus
ENSSLDG00000002178	-	99	96.353	ENSSDUG00000007597	-	99	96.353	Seriola_dumerili
ENSSLDG00000002178	-	91	47.962	ENSSDUG00000006559	tdrd6	69	37.113	Seriola_dumerili
ENSSLDG00000002178	-	91	35.961	ENSSPAG00000013194	tdrd6	91	35.961	Stegastes_partitus
ENSSLDG00000002178	-	99	33.333	ENSSSCG00000021218	TDRD6	83	33.333	Sus_scrofa
ENSSLDG00000002178	-	80	40.343	ENSTRUG00000006534	-	94	40.343	Takifugu_rubripes
ENSSLDG00000002178	-	98	51.507	ENSTRUG00000023197	-	99	51.872	Takifugu_rubripes
ENSSLDG00000002178	-	81	54.301	ENSTNIG00000019317	-	87	54.301	Tetraodon_nigroviridis
ENSSLDG00000002178	-	95	32.632	ENSTTRG00000008440	TDRD6	79	32.414	Tursiops_truncatus
ENSSLDG00000002178	-	99	32.594	ENSUAMG00000014941	TDRD6	83	32.594	Ursus_americanus
ENSSLDG00000002178	-	96	35.859	ENSUMAG00000005127	TDRD6	74	35.859	Ursus_maritimus
ENSSLDG00000002178	-	100	32.957	ENSVVUG00000029302	TDRD6	80	30.693	Vulpes_vulpes
ENSSLDG00000002178	-	90	39.835	ENSXCOG00000008476	tdrd6	96	39.835	Xiphophorus_couchianus
ENSSLDG00000002178	-	99	37.895	ENSXMAG00000025787	tdrd6	78	37.895	Xiphophorus_maculatus