EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000002329 (Gene tree)
Gene ID: -
Gene Symbol: rbm5
Alias: wu:fc25a08|wu:fe06f12
Full Name: RNA-binding protein 5-B-like
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 9699 bases
Position: chrPEQF01098895.1:200779-210477
Accession: 111657856
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000002904	zf-RanBP	PF00641.18	5.4e-10	1	1
ENSSLDP00000002904	RRM_1	PF00076.22	2.5e-12	1	2
ENSSLDP00000002904	RRM_1	PF00076.22	2.5e-12	2	2
ENSSLDP00000002904	G-patch	PF01585.23	2.7e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000003015	-	3820	XM_023410187	ENSSLDP00000002904	849 (aa)	XP_023265955	UPI000C6F5F9A

Gene Model

Click here to download ENSSLDG00000002329's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000002329's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000002329	rbm5	100	65.327	ENSSLDG00000015996	-	100	66.820
ENSSLDG00000002329	rbm5	89	42.824	ENSSLDG00000001390	rbm10	73	45.157

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000002329	rbm5	100	62.384	ENSG00000003756	RBM5	100	62.572	Homo_sapiens
ENSSLDG00000002329	rbm5	100	65.465	ENSAPOG00000006011	-	100	66.551	Acanthochromis_polyacanthus
ENSSLDG00000002329	rbm5	100	90.221	ENSAPOG00000016625	rbm5	100	90.338	Acanthochromis_polyacanthus
ENSSLDG00000002329	rbm5	100	62.269	ENSAMEG00000012005	RBM5	100	62.572	Ailuropoda_melanoleuca
ENSSLDG00000002329	rbm5	99	59.049	ENSACIG00000021310	-	99	58.401	Amphilophus_citrinellus
ENSSLDG00000002329	rbm5	65	88.000	ENSACIG00000007571	rbm5	100	87.200	Amphilophus_citrinellus
ENSSLDG00000002329	rbm5	100	90.454	ENSAOCG00000002880	rbm5	100	90.687	Amphiprion_ocellaris
ENSSLDG00000002329	rbm5	99	63.189	ENSAOCG00000017312	-	99	63.423	Amphiprion_ocellaris
ENSSLDG00000002329	rbm5	90	88.630	ENSAPEG00000011862	rbm5	92	88.760	Amphiprion_percula
ENSSLDG00000002329	rbm5	100	65.814	ENSAPEG00000018222	RBM5	100	66.163	Amphiprion_percula
ENSSLDG00000002329	rbm5	100	88.785	ENSATEG00000024663	rbm5	100	89.148	Anabas_testudineus
ENSSLDG00000002329	rbm5	100	67.241	ENSATEG00000003838	-	100	65.862	Anabas_testudineus
ENSSLDG00000002329	rbm5	93	63.750	ENSAPLG00000011176	RBM5	99	64.170	Anas_platyrhynchos
ENSSLDG00000002329	rbm5	100	59.230	ENSACAG00000008580	RBM5	100	62.100	Anolis_carolinensis
ENSSLDG00000002329	rbm5	100	62.037	ENSANAG00000025199	RBM5	100	62.572	Aotus_nancymaae
ENSSLDG00000002329	rbm5	100	89.918	ENSACLG00000012748	rbm5	100	89.801	Astatotilapia_calliptera
ENSSLDG00000002329	rbm5	89	78.049	ENSACLG00000024198	RBM5	100	78.571	Astatotilapia_calliptera
ENSSLDG00000002329	rbm5	84	77.029	ENSAMXG00000008146	rbm5	100	76.754	Astyanax_mexicanus
ENSSLDG00000002329	rbm5	100	62.269	ENSBTAG00000006330	RBM5	100	62.572	Bos_taurus
ENSSLDG00000002329	rbm5	100	62.269	ENSCJAG00000004740	RBM5	100	67.308	Callithrix_jacchus
ENSSLDG00000002329	rbm5	100	62.384	ENSCAFG00000010866	RBM5	100	62.659	Canis_familiaris
ENSSLDG00000002329	rbm5	100	62.384	ENSCAFG00020022126	RBM5	100	62.659	Canis_lupus_dingo
ENSSLDG00000002329	rbm5	100	62.384	ENSCHIG00000018435	RBM5	100	62.572	Capra_hircus
ENSSLDG00000002329	rbm5	86	60.349	ENSTSYG00000004158	RBM5	100	60.992	Carlito_syrichta
ENSSLDG00000002329	rbm5	100	50.758	ENSCAPG00000013495	RBM5	100	51.217	Cavia_aperea
ENSSLDG00000002329	rbm5	100	62.033	ENSCPOG00000008151	RBM5	100	62.225	Cavia_porcellus
ENSSLDG00000002329	rbm5	99	62.282	ENSCCAG00000026401	RBM5	100	61.751	Cebus_capucinus
ENSSLDG00000002329	rbm5	100	62.384	ENSCATG00000041038	RBM5	100	62.572	Cercocebus_atys
ENSSLDG00000002329	rbm5	100	62.282	ENSCLAG00000007873	RBM5	100	62.428	Chinchilla_lanigera
ENSSLDG00000002329	rbm5	100	62.384	ENSCSAG00000014401	RBM5	100	62.572	Chlorocebus_sabaeus
ENSSLDG00000002329	rbm5	81	57.163	ENSCHOG00000009429	RBM5	85	56.776	Choloepus_hoffmanni
ENSSLDG00000002329	rbm5	91	64.691	ENSCPBG00000002406	RBM5	100	62.900	Chrysemys_picta_bellii
ENSSLDG00000002329	rbm5	100	61.458	ENSCANG00000031250	RBM5	100	61.761	Colobus_angolensis_palliatus
ENSSLDG00000002329	rbm5	100	62.543	ENSCGRG00001010543	Rbm5	100	62.457	Cricetulus_griseus_chok1gshd
ENSSLDG00000002329	rbm5	100	62.543	ENSCGRG00000008475	Rbm5	100	62.457	Cricetulus_griseus_crigri
ENSSLDG00000002329	rbm5	98	84.379	ENSCSEG00000000596	rbm5	97	85.882	Cynoglossus_semilaevis
ENSSLDG00000002329	rbm5	100	81.185	ENSCVAG00000005655	rbm5	100	81.533	Cyprinodon_variegatus
ENSSLDG00000002329	rbm5	100	64.138	ENSDARG00000098280	rbm5	100	71.148	Danio_rerio
ENSSLDG00000002329	rbm5	100	62.297	ENSDNOG00000011756	RBM5	100	62.572	Dasypus_novemcinctus
ENSSLDG00000002329	rbm5	100	62.428	ENSDORG00000007692	Rbm5	100	62.457	Dipodomys_ordii
ENSSLDG00000002329	rbm5	91	60.924	ENSETEG00000012773	RBM5	93	60.719	Echinops_telfairi
ENSSLDG00000002329	rbm5	77	62.097	ENSEBUG00000017034	rbm5	84	62.097	Eptatretus_burgeri
ENSSLDG00000002329	rbm5	100	62.384	ENSEASG00005011835	RBM5	100	62.572	Equus_asinus_asinus
ENSSLDG00000002329	rbm5	100	62.384	ENSECAG00000020447	RBM5	100	62.572	Equus_caballus
ENSSLDG00000002329	rbm5	88	72.059	ENSEEUG00000005943	RBM5	88	69.756	Erinaceus_europaeus
ENSSLDG00000002329	rbm5	100	78.046	ENSELUG00000022467	rbm5	100	77.356	Esox_lucius
ENSSLDG00000002329	rbm5	100	62.137	ENSFCAG00000014639	RBM5	100	62.457	Felis_catus
ENSSLDG00000002329	rbm5	99	61.029	ENSFALG00000008828	RBM5	83	64.303	Ficedula_albicollis
ENSSLDG00000002329	rbm5	100	61.932	ENSFDAG00000001897	RBM5	100	62.093	Fukomys_damarensis
ENSSLDG00000002329	rbm5	92	97.619	ENSFHEG00000015954	rbm5	100	97.619	Fundulus_heteroclitus
ENSSLDG00000002329	rbm5	99	73.684	ENSGMOG00000016224	rbm5	100	74.386	Gadus_morhua
ENSSLDG00000002329	rbm5	100	50.699	ENSGMOG00000007810	-	95	61.696	Gadus_morhua
ENSSLDG00000002329	rbm5	92	63.659	ENSGALG00000039288	RBM5	83	64.419	Gallus_gallus
ENSSLDG00000002329	rbm5	100	82.791	ENSGAFG00000010690	rbm5	100	83.256	Gambusia_affinis
ENSSLDG00000002329	rbm5	100	62.543	ENSGACG00000000858	-	100	62.543	Gasterosteus_aculeatus
ENSSLDG00000002329	rbm5	100	82.827	ENSGACG00000010469	rbm5	100	83.025	Gasterosteus_aculeatus
ENSSLDG00000002329	rbm5	96	61.483	ENSGAGG00000007935	RBM5	99	62.172	Gopherus_agassizii
ENSSLDG00000002329	rbm5	100	62.384	ENSGGOG00000014490	RBM5	100	62.572	Gorilla_gorilla
ENSSLDG00000002329	rbm5	100	88.850	ENSHBUG00000001941	rbm5	100	89.082	Haplochromis_burtoni
ENSSLDG00000002329	rbm5	89	78.049	ENSHBUG00000011901	-	100	78.571	Haplochromis_burtoni
ENSSLDG00000002329	rbm5	100	61.932	ENSHGLG00000014844	RBM5	100	62.240	Heterocephalus_glaber_female
ENSSLDG00000002329	rbm5	100	62.005	ENSHGLG00100010739	RBM5	100	62.341	Heterocephalus_glaber_male
ENSSLDG00000002329	rbm5	96	80.854	ENSHCOG00000017110	rbm5	99	81.829	Hippocampus_comes
ENSSLDG00000002329	rbm5	100	56.441	ENSHCOG00000004536	-	100	56.223	Hippocampus_comes
ENSSLDG00000002329	rbm5	100	74.825	ENSIPUG00000000640	rbm5	100	76.019	Ictalurus_punctatus
ENSSLDG00000002329	rbm5	100	62.500	ENSSTOG00000013856	RBM5	100	62.688	Ictidomys_tridecemlineatus
ENSSLDG00000002329	rbm5	100	62.543	ENSJJAG00000008844	Rbm5	100	63.036	Jaculus_jaculus
ENSSLDG00000002329	rbm5	100	85.332	ENSKMAG00000006663	rbm5	100	84.866	Kryptolebias_marmoratus
ENSSLDG00000002329	rbm5	56	66.777	ENSLBEG00000002522	-	84	67.719	Labrus_bergylta
ENSSLDG00000002329	rbm5	100	63.194	ENSLBEG00000010877	-	94	62.428	Labrus_bergylta
ENSSLDG00000002329	rbm5	100	88.785	ENSLBEG00000020858	rbm5	100	88.318	Labrus_bergylta
ENSSLDG00000002329	rbm5	100	71.266	ENSLOCG00000010774	rbm5	100	71.380	Lepisosteus_oculatus
ENSSLDG00000002329	rbm5	100	61.789	ENSLAFG00000006733	RBM5	100	62.356	Loxodonta_africana
ENSSLDG00000002329	rbm5	100	62.384	ENSMFAG00000031609	RBM5	100	62.572	Macaca_fascicularis
ENSSLDG00000002329	rbm5	99	62.282	ENSMMUG00000004921	RBM5	99	62.471	Macaca_mulatta
ENSSLDG00000002329	rbm5	100	62.500	ENSMNEG00000044394	RBM5	100	62.688	Macaca_nemestrina
ENSSLDG00000002329	rbm5	100	60.885	ENSMLEG00000034689	RBM5	100	61.476	Mandrillus_leucophaeus
ENSSLDG00000002329	rbm5	100	67.283	ENSMAMG00000023948	-	100	62.500	Mastacembelus_armatus
ENSSLDG00000002329	rbm5	91	100.000	ENSMAMG00000017277	rbm5	99	100.000	Mastacembelus_armatus
ENSSLDG00000002329	rbm5	100	89.918	ENSMZEG00005015328	rbm5	100	89.801	Maylandia_zebra
ENSSLDG00000002329	rbm5	100	61.751	ENSMZEG00005010035	-	100	61.866	Maylandia_zebra
ENSSLDG00000002329	rbm5	92	63.648	ENSMGAG00000003972	RBM5	99	64.322	Meleagris_gallopavo
ENSSLDG00000002329	rbm5	99	62.326	ENSMAUG00000020572	Rbm5	98	62.354	Mesocricetus_auratus
ENSSLDG00000002329	rbm5	100	62.384	ENSMICG00000016179	RBM5	100	62.572	Microcebus_murinus
ENSSLDG00000002329	rbm5	100	62.890	ENSMOCG00000017479	Rbm5	100	62.804	Microtus_ochrogaster
ENSSLDG00000002329	rbm5	90	61.230	ENSMMOG00000021804	-	99	52.693	Mola_mola
ENSSLDG00000002329	rbm5	100	72.889	ENSMMOG00000015342	rbm5	100	72.124	Mola_mola
ENSSLDG00000002329	rbm5	100	61.789	ENSMODG00000012301	RBM5	100	62.688	Monodelphis_domestica
ENSSLDG00000002329	rbm5	99	74.796	ENSMALG00000000609	rbm5	99	75.754	Monopterus_albus
ENSSLDG00000002329	rbm5	100	63.921	ENSMALG00000016769	-	100	63.457	Monopterus_albus
ENSSLDG00000002329	rbm5	100	62.037	MGP_CAROLIEiJ_G0032660	Rbm5	100	64.202	Mus_caroli
ENSSLDG00000002329	rbm5	100	62.153	ENSMUSG00000032580	Rbm5	100	64.202	Mus_musculus
ENSSLDG00000002329	rbm5	100	62.181	MGP_PahariEiJ_G0015528	Rbm5	100	64.202	Mus_pahari
ENSSLDG00000002329	rbm5	100	62.153	MGP_SPRETEiJ_G0033805	Rbm5	100	64.202	Mus_spretus
ENSSLDG00000002329	rbm5	100	62.299	ENSMLUG00000007875	RBM5	100	62.844	Myotis_lucifugus
ENSSLDG00000002329	rbm5	100	61.965	ENSNGAG00000011777	Rbm5	100	62.457	Nannospalax_galili
ENSSLDG00000002329	rbm5	100	88.734	ENSNBRG00000018097	rbm5	100	88.966	Neolamprologus_brichardi
ENSSLDG00000002329	rbm5	98	59.181	ENSNBRG00000004400	RBM5	97	59.904	Neolamprologus_brichardi
ENSSLDG00000002329	rbm5	100	62.269	ENSNLEG00000006943	RBM5	100	62.457	Nomascus_leucogenys
ENSSLDG00000002329	rbm5	99	57.126	ENSMEUG00000012994	RBM5	100	58.673	Notamacropus_eugenii
ENSSLDG00000002329	rbm5	91	61.568	ENSOPRG00000015154	RBM5	93	61.028	Ochotona_princeps
ENSSLDG00000002329	rbm5	100	60.373	ENSODEG00000019111	-	100	59.560	Octodon_degus
ENSSLDG00000002329	rbm5	100	62.121	ENSODEG00000016254	-	100	62.428	Octodon_degus
ENSSLDG00000002329	rbm5	100	89.199	ENSONIG00000004107	rbm5	100	89.431	Oreochromis_niloticus
ENSSLDG00000002329	rbm5	100	62.788	ENSONIG00000019007	RBM5	100	62.903	Oreochromis_niloticus
ENSSLDG00000002329	rbm5	88	63.852	ENSOANG00000006557	RBM5	100	63.241	Ornithorhynchus_anatinus
ENSSLDG00000002329	rbm5	100	61.921	ENSOCUG00000011652	RBM5	100	62.081	Oryctolagus_cuniculus
ENSSLDG00000002329	rbm5	100	58.076	ENSORLG00000001053	-	100	57.961	Oryzias_latipes
ENSSLDG00000002329	rbm5	95	84.578	ENSORLG00000003369	rbm5	99	84.088	Oryzias_latipes
ENSSLDG00000002329	rbm5	96	57.488	ENSORLG00020006782	-	98	57.609	Oryzias_latipes_hni
ENSSLDG00000002329	rbm5	100	84.947	ENSORLG00020021744	rbm5	100	84.481	Oryzias_latipes_hni
ENSSLDG00000002329	rbm5	96	57.367	ENSORLG00015002854	-	98	57.609	Oryzias_latipes_hsok
ENSSLDG00000002329	rbm5	91	95.238	ENSORLG00015018379	rbm5	99	95.238	Oryzias_latipes_hsok
ENSSLDG00000002329	rbm5	100	84.965	ENSOMEG00000002219	rbm5	100	84.382	Oryzias_melastigma
ENSSLDG00000002329	rbm5	66	69.792	ENSOMEG00000010653	-	87	68.306	Oryzias_melastigma
ENSSLDG00000002329	rbm5	92	63.065	ENSOGAG00000004205	RBM5	99	62.312	Otolemur_garnettii
ENSSLDG00000002329	rbm5	100	62.384	ENSOARG00000010923	RBM5	100	62.572	Ovis_aries
ENSSLDG00000002329	rbm5	100	62.384	ENSPPAG00000043010	RBM5	100	62.572	Pan_paniscus
ENSSLDG00000002329	rbm5	100	62.137	ENSPPRG00000005404	RBM5	100	62.457	Panthera_pardus
ENSSLDG00000002329	rbm5	100	62.137	ENSPTIG00000000962	RBM5	100	62.457	Panthera_tigris_altaica
ENSSLDG00000002329	rbm5	100	62.384	ENSPTRG00000014946	RBM5	100	62.572	Pan_troglodytes
ENSSLDG00000002329	rbm5	100	62.384	ENSPANG00000018507	RBM5	100	62.572	Papio_anubis
ENSSLDG00000002329	rbm5	77	57.164	ENSPKIG00000019187	-	100	56.737	Paramormyrops_kingsleyae
ENSSLDG00000002329	rbm5	100	69.966	ENSPKIG00000024837	RBM5	100	71.707	Paramormyrops_kingsleyae
ENSSLDG00000002329	rbm5	88	63.553	ENSPSIG00000016073	RBM5	100	63.421	Pelodiscus_sinensis
ENSSLDG00000002329	rbm5	79	64.317	ENSPMGG00000017347	rbm5	100	64.474	Periophthalmus_magnuspinnatus
ENSSLDG00000002329	rbm5	88	82.051	ENSPMGG00000004719	-	99	80.952	Periophthalmus_magnuspinnatus
ENSSLDG00000002329	rbm5	99	44.989	ENSPMAG00000001998	rbm5	99	44.658	Petromyzon_marinus
ENSSLDG00000002329	rbm5	100	61.468	ENSPCIG00000021531	RBM5	100	62.804	Phascolarctos_cinereus
ENSSLDG00000002329	rbm5	100	82.462	ENSPLAG00000006318	rbm5	100	82.927	Poecilia_latipinna
ENSSLDG00000002329	rbm5	100	81.860	ENSPMEG00000004295	rbm5	100	82.907	Poecilia_mexicana
ENSSLDG00000002329	rbm5	74	72.943	ENSPMEG00000008651	rbm5	99	73.734	Poecilia_mexicana
ENSSLDG00000002329	rbm5	100	83.256	ENSPREG00000003795	rbm5	100	83.256	Poecilia_reticulata
ENSSLDG00000002329	rbm5	61	64.000	ENSPCAG00000005459	RBM5	73	64.126	Procavia_capensis
ENSSLDG00000002329	rbm5	100	62.253	ENSPCOG00000025840	RBM5	100	62.572	Propithecus_coquereli
ENSSLDG00000002329	rbm5	100	59.861	ENSPVAG00000006812	RBM5	100	59.676	Pteropus_vampyrus
ENSSLDG00000002329	rbm5	83	62.672	ENSPNYG00000006361	RBM5	99	62.810	Pundamilia_nyererei
ENSSLDG00000002329	rbm5	100	88.966	ENSPNYG00000014787	rbm5	100	89.199	Pundamilia_nyererei
ENSSLDG00000002329	rbm5	100	75.404	ENSPNAG00000012070	rbm5	100	75.866	Pygocentrus_nattereri
ENSSLDG00000002329	rbm5	100	61.833	ENSRNOG00000018153	Rbm5	100	62.616	Rattus_norvegicus
ENSSLDG00000002329	rbm5	100	62.616	ENSRBIG00000012679	RBM5	100	62.890	Rhinopithecus_bieti
ENSSLDG00000002329	rbm5	100	62.616	ENSRROG00000041331	RBM5	100	62.890	Rhinopithecus_roxellana
ENSSLDG00000002329	rbm5	100	62.384	ENSSBOG00000006324	RBM5	100	62.572	Saimiri_boliviensis_boliviensis
ENSSLDG00000002329	rbm5	100	62.037	ENSSHAG00000018260	RBM5	100	62.688	Sarcophilus_harrisii
ENSSLDG00000002329	rbm5	100	74.855	ENSSFOG00015019052	rbm5	94	73.812	Scleropages_formosus
ENSSLDG00000002329	rbm5	100	70.034	ENSSFOG00015019645	-	100	71.642	Scleropages_formosus
ENSSLDG00000002329	rbm5	100	90.728	ENSSMAG00000017106	rbm5	100	89.437	Scophthalmus_maximus
ENSSLDG00000002329	rbm5	100	99.176	ENSSDUG00000019775	rbm5	100	99.176	Seriola_dumerili
ENSSLDG00000002329	rbm5	58	76.923	ENSSARG00000009724	-	63	74.359	Sorex_araneus
ENSSLDG00000002329	rbm5	100	57.249	ENSSPUG00000001876	RBM5	87	61.144	Sphenodon_punctatus
ENSSLDG00000002329	rbm5	100	66.051	ENSSPAG00000020011	-	100	66.166	Stegastes_partitus
ENSSLDG00000002329	rbm5	100	89.671	ENSSPAG00000019638	rbm5	100	90.493	Stegastes_partitus
ENSSLDG00000002329	rbm5	92	73.810	ENSSSCG00000011395	RBM5	100	73.810	Sus_scrofa
ENSSLDG00000002329	rbm5	92	57.629	ENSTGUG00000006417	RBM5	98	58.052	Taeniopygia_guttata
ENSSLDG00000002329	rbm5	100	84.463	ENSTRUG00000008292	rbm5	100	84.718	Takifugu_rubripes
ENSSLDG00000002329	rbm5	88	79.643	ENSTNIG00000014742	rbm5	98	79.643	Tetraodon_nigroviridis
ENSSLDG00000002329	rbm5	100	56.416	ENSTBEG00000005424	RBM5	100	56.895	Tupaia_belangeri
ENSSLDG00000002329	rbm5	91	59.292	ENSTTRG00000007717	RBM5	100	57.176	Tursiops_truncatus
ENSSLDG00000002329	rbm5	100	62.269	ENSUAMG00000028347	RBM5	100	62.572	Ursus_americanus
ENSSLDG00000002329	rbm5	100	62.269	ENSUMAG00000022027	RBM5	100	67.308	Ursus_maritimus
ENSSLDG00000002329	rbm5	89	60.751	ENSVPAG00000009388	RBM5	97	61.286	Vicugna_pacos
ENSSLDG00000002329	rbm5	100	62.384	ENSVVUG00000028647	RBM5	100	62.659	Vulpes_vulpes
ENSSLDG00000002329	rbm5	100	83.372	ENSXMAG00000016369	rbm5	100	83.372	Xiphophorus_maculatus