EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000002515 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 996 bases
Position: chrPEQF01098719.1:279577-280572
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000003177	zf-C2H2	PF00096.26	2.9e-21	1	4
ENSSLDP00000003177	zf-C2H2	PF00096.26	2.9e-21	2	4
ENSSLDP00000003177	zf-C2H2	PF00096.26	2.9e-21	3	4
ENSSLDP00000003177	zf-C2H2	PF00096.26	2.9e-21	4	4
ENSSLDP00000003177	zf-met	PF12874.7	1.1e-09	1	3
ENSSLDP00000003177	zf-met	PF12874.7	1.1e-09	2	3
ENSSLDP00000003177	zf-met	PF12874.7	1.1e-09	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000003289	-	672	-	ENSSLDP00000003177	223 (aa)	-	-

Gene Model

Click here to download ENSSLDG00000002515's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000002515's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000002515	-	88	40.625	ENSSLDG00000001860	-	88	40.845
ENSSLDG00000002515	-	89	37.671	ENSSLDG00000013760	-	93	45.902
ENSSLDG00000002515	-	50	46.552	ENSSLDG00000007568	-	69	46.552
ENSSLDG00000002515	-	78	38.372	ENSSLDG00000012036	-	95	42.857
ENSSLDG00000002515	-	70	53.659	ENSSLDG00000006994	-	96	46.154
ENSSLDG00000002515	-	76	52.500	ENSSLDG00000017937	-	94	45.783
ENSSLDG00000002515	-	74	46.753	ENSSLDG00000000859	-	90	46.753
ENSSLDG00000002515	-	70	39.716	ENSSLDG00000000457	-	75	39.716
ENSSLDG00000002515	-	88	50.538	ENSSLDG00000020675	-	98	47.059
ENSSLDG00000002515	-	64	48.750	ENSSLDG00000018273	-	77	48.750
ENSSLDG00000002515	-	72	42.446	ENSSLDG00000000376	-	73	42.446
ENSSLDG00000002515	-	65	36.641	ENSSLDG00000004098	-	92	36.641
ENSSLDG00000002515	-	67	36.806	ENSSLDG00000000464	-	56	36.806
ENSSLDG00000002515	-	88	35.570	ENSSLDG00000006288	-	93	39.583
ENSSLDG00000002515	-	62	51.923	ENSSLDG00000009061	-	91	51.923
ENSSLDG00000002515	-	75	35.897	ENSSLDG00000000203	-	66	39.130
ENSSLDG00000002515	-	87	54.545	ENSSLDG00000000202	-	93	54.545
ENSSLDG00000002515	-	76	50.000	ENSSLDG00000007756	-	99	50.000
ENSSLDG00000002515	-	84	37.222	ENSSLDG00000005868	-	96	37.222
ENSSLDG00000002515	-	76	40.000	ENSSLDG00000003269	znf710b	53	40.000
ENSSLDG00000002515	-	82	36.420	ENSSLDG00000014436	-	80	36.420
ENSSLDG00000002515	-	62	50.980	ENSSLDG00000000432	-	82	50.980
ENSSLDG00000002515	-	75	42.623	ENSSLDG00000008645	-	93	42.623
ENSSLDG00000002515	-	69	43.137	ENSSLDG00000019660	znf341	50	43.137
ENSSLDG00000002515	-	91	49.351	ENSSLDG00000012821	znf236	56	49.351
ENSSLDG00000002515	-	76	42.537	ENSSLDG00000020990	-	52	42.537
ENSSLDG00000002515	-	78	42.029	ENSSLDG00000000352	-	76	40.845
ENSSLDG00000002515	-	74	39.286	ENSSLDG00000023661	-	86	39.286
ENSSLDG00000002515	-	65	36.879	ENSSLDG00000014177	zbtb47b	51	36.879
ENSSLDG00000002515	-	61	44.898	ENSSLDG00000002756	-	67	44.898
ENSSLDG00000002515	-	75	37.931	ENSSLDG00000006724	-	99	37.931
ENSSLDG00000002515	-	62	45.652	ENSSLDG00000009821	-	78	45.652
ENSSLDG00000002515	-	85	45.570	ENSSLDG00000012133	-	83	41.600
ENSSLDG00000002515	-	87	37.671	ENSSLDG00000005670	-	84	37.671
ENSSLDG00000002515	-	70	51.515	ENSSLDG00000009582	-	95	51.515
ENSSLDG00000002515	-	73	51.667	ENSSLDG00000007524	-	82	37.681
ENSSLDG00000002515	-	74	35.862	ENSSLDG00000020432	-	95	35.862
ENSSLDG00000002515	-	70	49.383	ENSSLDG00000018598	-	84	49.383
ENSSLDG00000002515	-	71	42.424	ENSSLDG00000016317	-	85	42.424
ENSSLDG00000002515	-	89	38.732	ENSSLDG00000004756	-	96	38.732
ENSSLDG00000002515	-	82	41.667	ENSSLDG00000018493	-	83	41.667
ENSSLDG00000002515	-	61	41.429	ENSSLDG00000001850	-	51	41.429
ENSSLDG00000002515	-	87	53.571	ENSSLDG00000018033	-	66	53.571
ENSSLDG00000002515	-	59	36.765	ENSSLDG00000017614	-	95	36.765
ENSSLDG00000002515	-	83	38.043	ENSSLDG00000010390	-	89	38.043
ENSSLDG00000002515	-	76	36.691	ENSSLDG00000018521	znf646	56	38.462
ENSSLDG00000002515	-	70	53.448	ENSSLDG00000001787	zbtb24	81	55.932
ENSSLDG00000002515	-	84	36.620	ENSSLDG00000017718	zbtb48	58	36.620
ENSSLDG00000002515	-	72	37.342	ENSSLDG00000023060	-	68	39.189
ENSSLDG00000002515	-	64	37.681	ENSSLDG00000013170	zbtb17	76	42.268
ENSSLDG00000002515	-	72	41.667	ENSSLDG00000020455	-	83	41.667
ENSSLDG00000002515	-	69	38.462	ENSSLDG00000002776	-	73	38.462
ENSSLDG00000002515	-	75	48.052	ENSSLDG00000021278	-	65	48.052
ENSSLDG00000002515	-	70	39.310	ENSSLDG00000013823	gfi1b	55	39.310
ENSSLDG00000002515	-	91	40.260	ENSSLDG00000015116	-	89	31.250
ENSSLDG00000002515	-	84	35.507	ENSSLDG00000025676	-	58	35.507
ENSSLDG00000002515	-	71	51.948	ENSSLDG00000020727	-	95	54.098
ENSSLDG00000002515	-	70	37.410	ENSSLDG00000013353	prdm5	83	37.410
ENSSLDG00000002515	-	70	33.333	ENSSLDG00000014166	znf319b	73	33.333
ENSSLDG00000002515	-	62	43.548	ENSSLDG00000010190	-	74	43.548
ENSSLDG00000002515	-	86	44.318	ENSSLDG00000004005	-	80	44.318
ENSSLDG00000002515	-	84	37.222	ENSSLDG00000006217	-	94	37.222
ENSSLDG00000002515	-	77	42.424	ENSSLDG00000005850	-	96	42.424
ENSSLDG00000002515	-	69	40.816	ENSSLDG00000016301	-	90	40.816
ENSSLDG00000002515	-	70	45.455	ENSSLDG00000024295	ZNF319	77	45.455
ENSSLDG00000002515	-	85	37.013	ENSSLDG00000004485	-	68	37.013
ENSSLDG00000002515	-	70	40.580	ENSSLDG00000012320	-	95	39.394

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000002515	-	96	75.463	ENSACIG00000017166	-	86	75.463	Amphilophus_citrinellus
ENSSLDG00000002515	-	60	48.000	ENSAPEG00000007889	-	61	48.000	Amphiprion_percula
ENSSLDG00000002515	-	60	38.583	ENSAPEG00000019755	-	82	33.766	Amphiprion_percula
ENSSLDG00000002515	-	66	30.065	WBGene00021374	Y37E11B.1	84	30.282	Caenorhabditis_elegans
ENSSLDG00000002515	-	65	36.782	ENSCING00000003384	-	61	36.782	Ciona_intestinalis
ENSSLDG00000002515	-	88	31.481	ENSCING00000005713	-	89	31.481	Ciona_intestinalis
ENSSLDG00000002515	-	94	34.091	ENSCING00000004861	zf(c2h2)-12	79	33.043	Ciona_intestinalis
ENSSLDG00000002515	-	71	33.846	ENSCSAVG00000006729	-	69	34.437	Ciona_savignyi
ENSSLDG00000002515	-	65	41.772	ENSCSAVG00000003895	-	99	41.772	Ciona_savignyi
ENSSLDG00000002515	-	78	37.209	ENSCSAVG00000005896	-	72	34.375	Ciona_savignyi
ENSSLDG00000002515	-	86	39.560	ENSCSAVG00000009574	-	99	45.312	Ciona_savignyi
ENSSLDG00000002515	-	85	36.364	ENSCSEG00000005491	-	57	48.387	Cynoglossus_semilaevis
ENSSLDG00000002515	-	70	45.679	ENSCVAG00000002295	-	77	45.679	Cyprinodon_variegatus
ENSSLDG00000002515	-	64	39.773	ENSCVAG00000019574	-	77	39.773	Cyprinodon_variegatus
ENSSLDG00000002515	-	71	37.063	ENSCVAG00000016098	-	55	37.063	Cyprinodon_variegatus
ENSSLDG00000002515	-	64	34.247	FBgn0037722	CG8319	62	34.247	Drosophila_melanogaster
ENSSLDG00000002515	-	63	39.860	FBgn0033934	CG17385	60	39.860	Drosophila_melanogaster
ENSSLDG00000002515	-	80	43.478	ENSEBUG00000000735	-	98	43.478	Eptatretus_burgeri
ENSSLDG00000002515	-	78	44.203	ENSEBUG00000008392	-	74	42.754	Eptatretus_burgeri
ENSSLDG00000002515	-	70	32.787	ENSEBUG00000016914	-	55	32.787	Eptatretus_burgeri
ENSSLDG00000002515	-	85	41.259	ENSEBUG00000004841	-	85	41.259	Eptatretus_burgeri
ENSSLDG00000002515	-	81	42.754	ENSEBUG00000015522	-	71	42.754	Eptatretus_burgeri
ENSSLDG00000002515	-	80	37.121	ENSELUG00000020794	-	60	37.121	Esox_lucius
ENSSLDG00000002515	-	88	36.111	ENSFHEG00000020889	-	86	36.111	Fundulus_heteroclitus
ENSSLDG00000002515	-	85	35.461	ENSFHEG00000012990	-	91	35.461	Fundulus_heteroclitus
ENSSLDG00000002515	-	86	44.928	ENSFHEG00000013644	-	86	44.928	Fundulus_heteroclitus
ENSSLDG00000002515	-	70	41.772	ENSGACG00000018415	-	99	41.772	Gasterosteus_aculeatus
ENSSLDG00000002515	-	65	42.857	ENSHCOG00000014887	-	51	42.857	Hippocampus_comes
ENSSLDG00000002515	-	86	46.875	ENSHCOG00000014881	-	65	46.875	Hippocampus_comes
ENSSLDG00000002515	-	61	52.857	ENSHCOG00000017437	-	51	50.877	Hippocampus_comes
ENSSLDG00000002515	-	91	31.111	ENSHCOG00000008181	-	78	48.052	Hippocampus_comes
ENSSLDG00000002515	-	76	35.714	ENSKMAG00000012909	-	75	33.571	Kryptolebias_marmoratus
ENSSLDG00000002515	-	68	36.129	ENSKMAG00000007658	-	86	36.129	Kryptolebias_marmoratus
ENSSLDG00000002515	-	88	51.020	ENSLBEG00000026573	-	80	51.020	Labrus_bergylta
ENSSLDG00000002515	-	96	41.611	ENSONIG00000007812	-	99	41.611	Oreochromis_niloticus
ENSSLDG00000002515	-	70	38.806	ENSONIG00000003471	-	97	38.806	Oreochromis_niloticus
ENSSLDG00000002515	-	71	36.429	ENSONIG00000003224	-	92	36.429	Oreochromis_niloticus
ENSSLDG00000002515	-	59	40.146	ENSONIG00000009894	-	74	40.146	Oreochromis_niloticus
ENSSLDG00000002515	-	77	45.614	ENSONIG00000016416	-	97	45.614	Oreochromis_niloticus
ENSSLDG00000002515	-	72	50.943	ENSORLG00015018254	-	89	50.943	Oryzias_latipes_hsok
ENSSLDG00000002515	-	90	36.047	ENSOMEG00000017673	-	78	36.047	Oryzias_melastigma
ENSSLDG00000002515	-	64	33.548	ENSPMGG00000012289	-	70	33.548	Periophthalmus_magnuspinnatus
ENSSLDG00000002515	-	76	30.726	ENSPMGG00000019842	-	70	30.726	Periophthalmus_magnuspinnatus
ENSSLDG00000002515	-	75	41.558	ENSPMGG00000010664	-	85	41.558	Periophthalmus_magnuspinnatus
ENSSLDG00000002515	-	82	44.828	ENSPMGG00000022524	-	93	44.828	Periophthalmus_magnuspinnatus
ENSSLDG00000002515	-	68	50.000	ENSPMGG00000010563	-	76	37.190	Periophthalmus_magnuspinnatus
ENSSLDG00000002515	-	94	31.250	ENSPMGG00000000458	-	94	46.914	Periophthalmus_magnuspinnatus
ENSSLDG00000002515	-	86	36.129	ENSPMGG00000000218	-	77	36.129	Periophthalmus_magnuspinnatus
ENSSLDG00000002515	-	86	31.250	ENSPMGG00000013602	-	64	34.028	Periophthalmus_magnuspinnatus
ENSSLDG00000002515	-	92	38.462	ENSPMGG00000000243	-	85	38.462	Periophthalmus_magnuspinnatus
ENSSLDG00000002515	-	71	39.344	ENSPMAG00000007983	-	97	39.344	Petromyzon_marinus
ENSSLDG00000002515	-	64	38.835	ENSPFOG00000020691	-	84	38.889	Poecilia_formosa
ENSSLDG00000002515	-	87	42.282	ENSPFOG00000002879	-	99	42.282	Poecilia_formosa
ENSSLDG00000002515	-	97	40.000	ENSPLAG00000006174	-	79	39.855	Poecilia_latipinna
ENSSLDG00000002515	-	61	41.304	ENSPLAG00000011254	-	58	41.304	Poecilia_latipinna
ENSSLDG00000002515	-	86	39.855	ENSPMEG00000022676	-	99	39.855	Poecilia_mexicana
ENSSLDG00000002515	-	71	35.135	ENSPMEG00000019229	-	60	35.135	Poecilia_mexicana
ENSSLDG00000002515	-	61	42.029	ENSPMEG00000007503	-	60	42.029	Poecilia_mexicana
ENSSLDG00000002515	-	71	34.722	ENSPREG00000007146	-	53	34.722	Poecilia_reticulata
ENSSLDG00000002515	-	68	40.580	ENSPREG00000016204	-	61	40.580	Poecilia_reticulata
ENSSLDG00000002515	-	76	40.000	ENSPNAG00000025211	-	54	40.000	Pygocentrus_nattereri
ENSSLDG00000002515	-	92	40.000	ENSSDUG00000000946	-	99	59.375	Seriola_dumerili
ENSSLDG00000002515	-	79	40.000	ENSTNIG00000008154	-	65	40.476	Tetraodon_nigroviridis
ENSSLDG00000002515	-	61	42.029	ENSXMAG00000022242	-	74	42.029	Xiphophorus_maculatus