EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000002525 (Gene tree)
Gene ID: -
Gene Symbol: ssb
Alias: wu:fb17f11
Full Name: Sjogren syndrome antigen B
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 3883 bases
Position: chrPEQF01098619.1:143689-147571
Accession: 111653066
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000003224	RRM_1	PF00076.22	1.2e-11	1	1
ENSSLDP00000003224	RRM_3	PF08777.11	2.8e-29	1	1
ENSSLDP00000003224	La	PF05383.17	3.2e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000003336	-	1140	XM_023403523	ENSSLDP00000003224	379 (aa)	XP_023259291	-

Gene Model

Click here to download ENSSLDG00000002525's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000002525's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000002525	ssb	100	54.926	ENSG00000138385	SSB	98	62.712	Homo_sapiens
ENSSLDG00000002525	ssb	100	84.422	ENSAPOG00000003448	ssb	100	84.673	Acanthochromis_polyacanthus
ENSSLDG00000002525	ssb	100	52.392	ENSAMEG00000010507	SSB	99	52.153	Ailuropoda_melanoleuca
ENSSLDG00000002525	ssb	93	82.289	ENSACIG00000001738	ssb	96	81.694	Amphilophus_citrinellus
ENSSLDG00000002525	ssb	100	85.678	ENSAOCG00000020398	ssb	100	85.930	Amphiprion_ocellaris
ENSSLDG00000002525	ssb	100	85.678	ENSAPEG00000020395	ssb	100	85.930	Amphiprion_percula
ENSSLDG00000002525	ssb	100	86.717	ENSATEG00000016884	ssb	100	86.466	Anabas_testudineus
ENSSLDG00000002525	ssb	100	52.494	ENSAPLG00000006109	SSB	99	52.969	Anas_platyrhynchos
ENSSLDG00000002525	ssb	100	53.398	ENSACAG00000017008	SSB	99	54.167	Anolis_carolinensis
ENSSLDG00000002525	ssb	100	49.628	ENSANAG00000027195	-	99	49.628	Aotus_nancymaae
ENSSLDG00000002525	ssb	100	77.330	ENSACLG00000010798	ssb	100	77.078	Astatotilapia_calliptera
ENSSLDG00000002525	ssb	100	58.191	ENSAMXG00000012606	ssb	100	59.413	Astyanax_mexicanus
ENSSLDG00000002525	ssb	100	55.224	ENSBTAG00000008716	SSB	99	55.224	Bos_taurus
ENSSLDG00000002525	ssb	75	34.539	WBGene00016653	C44E4.4	76	35.197	Caenorhabditis_elegans
ENSSLDG00000002525	ssb	100	55.583	ENSCJAG00000045073	SSB	99	55.583	Callithrix_jacchus
ENSSLDG00000002525	ssb	100	54.703	ENSCAFG00000012418	SSB	99	54.455	Canis_familiaris
ENSSLDG00000002525	ssb	100	54.703	ENSCAFG00020002900	SSB	99	54.455	Canis_lupus_dingo
ENSSLDG00000002525	ssb	100	51.750	ENSCHIG00000022196	-	99	52.000	Capra_hircus
ENSSLDG00000002525	ssb	100	55.087	ENSCHIG00000022624	-	99	55.087	Capra_hircus
ENSSLDG00000002525	ssb	99	57.254	ENSTSYG00000000097	SSB	99	57.254	Carlito_syrichta
ENSSLDG00000002525	ssb	100	57.069	ENSCPOG00000003338	SSB	99	57.069	Cavia_porcellus
ENSSLDG00000002525	ssb	100	55.583	ENSCCAG00000035147	SSB	99	55.583	Cebus_capucinus
ENSSLDG00000002525	ssb	99	43.421	ENSCATG00000042909	-	97	43.421	Cercocebus_atys
ENSSLDG00000002525	ssb	83	47.059	ENSCATG00000036701	SSB	83	51.389	Cercocebus_atys
ENSSLDG00000002525	ssb	100	55.831	ENSCLAG00000015617	-	99	55.831	Chinchilla_lanigera
ENSSLDG00000002525	ssb	99	49.622	ENSCSAG00000018390	-	100	49.622	Chlorocebus_sabaeus
ENSSLDG00000002525	ssb	100	55.583	ENSCSAG00000015200	SSB	88	55.583	Chlorocebus_sabaeus
ENSSLDG00000002525	ssb	100	55.583	ENSCHOG00000007763	SSB	99	55.583	Choloepus_hoffmanni
ENSSLDG00000002525	ssb	100	57.248	ENSCPBG00000006519	SSB	99	58.231	Chrysemys_picta_bellii
ENSSLDG00000002525	ssb	93	43.817	ENSCANG00000028838	-	88	43.817	Colobus_angolensis_palliatus
ENSSLDG00000002525	ssb	100	55.583	ENSCANG00000027695	SSB	99	55.583	Colobus_angolensis_palliatus
ENSSLDG00000002525	ssb	100	49.100	ENSCANG00000033240	-	99	49.100	Colobus_angolensis_palliatus
ENSSLDG00000002525	ssb	100	51.852	ENSCGRG00001024831	Ssb	99	50.864	Cricetulus_griseus_chok1gshd
ENSSLDG00000002525	ssb	100	51.852	ENSCGRG00000005387	Ssb	99	50.864	Cricetulus_griseus_crigri
ENSSLDG00000002525	ssb	99	81.910	ENSCSEG00000011599	ssb	99	81.658	Cynoglossus_semilaevis
ENSSLDG00000002525	ssb	100	79.000	ENSCVAG00000021558	ssb	100	80.000	Cyprinodon_variegatus
ENSSLDG00000002525	ssb	100	61.443	ENSDARG00000029252	ssb	100	61.443	Danio_rerio
ENSSLDG00000002525	ssb	100	55.583	ENSDNOG00000013450	SSB	99	55.583	Dasypus_novemcinctus
ENSSLDG00000002525	ssb	100	54.408	ENSDORG00000005543	Ssb	99	54.545	Dipodomys_ordii
ENSSLDG00000002525	ssb	84	35.965	FBgn0011638	La	78	37.299	Drosophila_melanogaster
ENSSLDG00000002525	ssb	99	43.622	ENSEBUG00000001237	ssb	97	44.216	Eptatretus_burgeri
ENSSLDG00000002525	ssb	100	55.583	ENSEASG00005022835	SSB	99	55.583	Equus_asinus_asinus
ENSSLDG00000002525	ssb	100	55.583	ENSECAG00000018495	SSB	99	55.583	Equus_caballus
ENSSLDG00000002525	ssb	76	51.203	ENSEEUG00000008077	SSB	78	51.203	Erinaceus_europaeus
ENSSLDG00000002525	ssb	100	69.825	ENSELUG00000020929	ssb	100	70.075	Esox_lucius
ENSSLDG00000002525	ssb	100	55.693	ENSFCAG00000011601	SSB	99	55.693	Felis_catus
ENSSLDG00000002525	ssb	99	55.941	ENSFALG00000000930	SSB	99	55.941	Ficedula_albicollis
ENSSLDG00000002525	ssb	100	55.831	ENSFDAG00000000598	SSB	99	55.831	Fukomys_damarensis
ENSSLDG00000002525	ssb	73	77.076	ENSFHEG00000003268	ssb	94	71.895	Fundulus_heteroclitus
ENSSLDG00000002525	ssb	98	72.362	ENSGMOG00000002664	ssb	100	72.362	Gadus_morhua
ENSSLDG00000002525	ssb	99	55.802	ENSGALG00000009677	SSB	99	54.568	Gallus_gallus
ENSSLDG00000002525	ssb	100	78.660	ENSGAFG00000002749	ssb	100	79.901	Gambusia_affinis
ENSSLDG00000002525	ssb	100	77.723	ENSGACG00000005107	ssb	100	77.228	Gasterosteus_aculeatus
ENSSLDG00000002525	ssb	100	57.494	ENSGAGG00000007807	SSB	99	57.740	Gopherus_agassizii
ENSSLDG00000002525	ssb	100	46.402	ENSGGOG00000024891	-	99	46.402	Gorilla_gorilla
ENSSLDG00000002525	ssb	51	51.364	ENSGGOG00000023471	-	90	51.364	Gorilla_gorilla
ENSSLDG00000002525	ssb	100	77.582	ENSHBUG00000006584	ssb	100	77.330	Haplochromis_burtoni
ENSSLDG00000002525	ssb	100	50.769	ENSHGLG00000005832	-	99	50.769	Heterocephalus_glaber_female
ENSSLDG00000002525	ssb	100	50.248	ENSHGLG00000004478	-	99	50.000	Heterocephalus_glaber_female
ENSSLDG00000002525	ssb	100	55.231	ENSHGLG00000017580	-	99	54.390	Heterocephalus_glaber_female
ENSSLDG00000002525	ssb	100	50.750	ENSHGLG00100008767	-	99	50.750	Heterocephalus_glaber_male
ENSSLDG00000002525	ssb	100	55.231	ENSHGLG00100003084	-	99	54.390	Heterocephalus_glaber_male
ENSSLDG00000002525	ssb	99	76.396	ENSHCOG00000019011	ssb	99	76.396	Hippocampus_comes
ENSSLDG00000002525	ssb	100	62.010	ENSIPUG00000003681	SSB	100	62.010	Ictalurus_punctatus
ENSSLDG00000002525	ssb	100	54.839	ENSSTOG00000008416	SSB	99	54.342	Ictidomys_tridecemlineatus
ENSSLDG00000002525	ssb	100	51.084	ENSJJAG00000023158	-	99	50.966	Jaculus_jaculus
ENSSLDG00000002525	ssb	89	45.349	ENSJJAG00000016250	-	94	45.349	Jaculus_jaculus
ENSSLDG00000002525	ssb	100	83.417	ENSKMAG00000017317	ssb	100	83.166	Kryptolebias_marmoratus
ENSSLDG00000002525	ssb	100	84.673	ENSLBEG00000017345	ssb	100	84.422	Labrus_bergylta
ENSSLDG00000002525	ssb	100	53.695	ENSLACG00000014056	SSB	99	54.187	Latimeria_chalumnae
ENSSLDG00000002525	ssb	100	63.951	ENSLOCG00000007933	ssb	99	63.951	Lepisosteus_oculatus
ENSSLDG00000002525	ssb	74	42.662	ENSLAFG00000026721	-	98	42.662	Loxodonta_africana
ENSSLDG00000002525	ssb	100	51.905	ENSLAFG00000000867	-	99	51.667	Loxodonta_africana
ENSSLDG00000002525	ssb	100	48.756	ENSLAFG00000028909	-	99	47.761	Loxodonta_africana
ENSSLDG00000002525	ssb	89	51.462	ENSMFAG00000041478	-	91	54.487	Macaca_fascicularis
ENSSLDG00000002525	ssb	100	55.583	ENSMFAG00000039066	SSB	99	55.583	Macaca_fascicularis
ENSSLDG00000002525	ssb	100	55.583	ENSMMUG00000023051	SSB	99	55.583	Macaca_mulatta
ENSSLDG00000002525	ssb	100	49.741	ENSMMUG00000011724	-	97	49.741	Macaca_mulatta
ENSSLDG00000002525	ssb	99	42.368	ENSMMUG00000039889	-	98	43.299	Macaca_mulatta
ENSSLDG00000002525	ssb	100	49.105	ENSMNEG00000028321	SSB	85	66.087	Macaca_nemestrina
ENSSLDG00000002525	ssb	89	51.462	ENSMNEG00000034698	-	91	54.487	Macaca_nemestrina
ENSSLDG00000002525	ssb	100	41.192	ENSMLEG00000042644	-	99	41.192	Mandrillus_leucophaeus
ENSSLDG00000002525	ssb	100	55.583	ENSMLEG00000035717	SSB	99	55.583	Mandrillus_leucophaeus
ENSSLDG00000002525	ssb	100	84.925	ENSMAMG00000004800	ssb	100	84.673	Mastacembelus_armatus
ENSSLDG00000002525	ssb	100	77.330	ENSMZEG00005005749	ssb	100	77.078	Maylandia_zebra
ENSSLDG00000002525	ssb	99	55.556	ENSMGAG00000010328	SSB	100	61.836	Meleagris_gallopavo
ENSSLDG00000002525	ssb	100	55.335	ENSMICG00000028252	-	99	55.583	Microcebus_murinus
ENSSLDG00000002525	ssb	98	52.128	ENSMICG00000033304	-	94	55.211	Microcebus_murinus
ENSSLDG00000002525	ssb	100	48.579	ENSMODG00000007027	-	99	48.579	Monodelphis_domestica
ENSSLDG00000002525	ssb	100	53.846	ENSMODG00000008227	-	99	53.846	Monodelphis_domestica
ENSSLDG00000002525	ssb	100	51.036	ENSMODG00000019271	-	99	51.036	Monodelphis_domestica
ENSSLDG00000002525	ssb	91	85.470	ENSMALG00000008045	ssb	89	82.584	Monopterus_albus
ENSSLDG00000002525	ssb	100	52.058	MGP_CAROLIEiJ_G0023629	-	98	62.420	Mus_caroli
ENSSLDG00000002525	ssb	100	52.058	ENSMUSG00000068882	Ssb	98	62.420	Mus_musculus
ENSSLDG00000002525	ssb	100	51.942	MGP_PahariEiJ_G0025081	-	98	61.783	Mus_pahari
ENSSLDG00000002525	ssb	100	52.058	MGP_SPRETEiJ_G0024551	Ssb	98	62.420	Mus_spretus
ENSSLDG00000002525	ssb	100	55.583	ENSMPUG00000000785	SSB	99	55.583	Mustela_putorius_furo
ENSSLDG00000002525	ssb	100	54.831	ENSMLUG00000016316	SSB	99	54.831	Myotis_lucifugus
ENSSLDG00000002525	ssb	100	77.136	ENSNBRG00000012661	ssb	100	76.884	Neolamprologus_brichardi
ENSSLDG00000002525	ssb	100	55.335	ENSNLEG00000004958	SSB	99	55.335	Nomascus_leucogenys
ENSSLDG00000002525	ssb	85	46.933	ENSNLEG00000028754	-	78	48.077	Nomascus_leucogenys
ENSSLDG00000002525	ssb	61	59.036	ENSMEUG00000001650	-	100	59.036	Notamacropus_eugenii
ENSSLDG00000002525	ssb	93	54.324	ENSODEG00000004202	-	99	54.324	Octodon_degus
ENSSLDG00000002525	ssb	100	79.397	ENSONIG00000008776	ssb	100	79.146	Oreochromis_niloticus
ENSSLDG00000002525	ssb	100	54.342	ENSOANG00000008543	SSB	99	54.342	Ornithorhynchus_anatinus
ENSSLDG00000002525	ssb	100	54.591	ENSOCUG00000010396	SSB	99	54.591	Oryctolagus_cuniculus
ENSSLDG00000002525	ssb	100	79.250	ENSORLG00000017208	ssb	100	79.500	Oryzias_latipes
ENSSLDG00000002525	ssb	100	78.803	ENSORLG00020022574	ssb	100	79.551	Oryzias_latipes_hni
ENSSLDG00000002525	ssb	100	79.750	ENSORLG00015016592	ssb	100	80.000	Oryzias_latipes_hsok
ENSSLDG00000002525	ssb	100	81.250	ENSOMEG00000003193	ssb	100	82.250	Oryzias_melastigma
ENSSLDG00000002525	ssb	100	52.381	ENSOGAG00000029768	SSB	99	52.143	Otolemur_garnettii
ENSSLDG00000002525	ssb	100	55.087	ENSOARG00000002906	SSB	99	55.087	Ovis_aries
ENSSLDG00000002525	ssb	100	54.926	ENSPPAG00000042673	SSB	99	54.926	Pan_paniscus
ENSSLDG00000002525	ssb	90	47.075	ENSPPAG00000006189	-	92	45.682	Pan_paniscus
ENSSLDG00000002525	ssb	100	46.154	ENSPPAG00000032427	-	100	58.140	Pan_paniscus
ENSSLDG00000002525	ssb	100	55.693	ENSPPRG00000006599	SSB	99	55.693	Panthera_pardus
ENSSLDG00000002525	ssb	100	55.693	ENSPTIG00000011021	SSB	97	55.693	Panthera_tigris_altaica
ENSSLDG00000002525	ssb	100	54.926	ENSPTRG00000012620	SSB	99	54.926	Pan_troglodytes
ENSSLDG00000002525	ssb	100	46.770	ENSPTRG00000042880	-	99	46.770	Pan_troglodytes
ENSSLDG00000002525	ssb	99	41.842	ENSPANG00000034126	-	97	42.819	Papio_anubis
ENSSLDG00000002525	ssb	100	55.583	ENSPANG00000007440	SSB	99	55.583	Papio_anubis
ENSSLDG00000002525	ssb	96	40.811	ENSPANG00000031877	-	91	40.541	Papio_anubis
ENSSLDG00000002525	ssb	100	69.825	ENSPKIG00000019325	ssb	99	67.581	Paramormyrops_kingsleyae
ENSSLDG00000002525	ssb	100	54.988	ENSPSIG00000002265	SSB	93	56.757	Pelodiscus_sinensis
ENSSLDG00000002525	ssb	87	71.920	ENSPMGG00000020075	ssb	91	71.920	Periophthalmus_magnuspinnatus
ENSSLDG00000002525	ssb	94	45.213	ENSPMAG00000002982	ssb	88	44.681	Petromyzon_marinus
ENSSLDG00000002525	ssb	99	55.556	ENSPCIG00000028591	-	99	55.693	Phascolarctos_cinereus
ENSSLDG00000002525	ssb	100	80.250	ENSPFOG00000009650	ssb	100	81.000	Poecilia_formosa
ENSSLDG00000002525	ssb	100	79.750	ENSPLAG00000020498	ssb	100	81.000	Poecilia_latipinna
ENSSLDG00000002525	ssb	100	80.000	ENSPMEG00000001051	ssb	100	80.750	Poecilia_mexicana
ENSSLDG00000002525	ssb	93	80.108	ENSPREG00000003708	ssb	98	80.697	Poecilia_reticulata
ENSSLDG00000002525	ssb	100	55.335	ENSPPYG00000012919	SSB	99	55.335	Pongo_abelii
ENSSLDG00000002525	ssb	95	54.813	ENSPCAG00000010276	SSB	99	54.813	Procavia_capensis
ENSSLDG00000002525	ssb	100	49.628	ENSPCOG00000023189	-	99	49.876	Propithecus_coquereli
ENSSLDG00000002525	ssb	100	53.980	ENSPCOG00000015741	-	92	63.793	Propithecus_coquereli
ENSSLDG00000002525	ssb	87	57.471	ENSPVAG00000006615	SSB	99	56.497	Pteropus_vampyrus
ENSSLDG00000002525	ssb	100	77.330	ENSPNYG00000006444	ssb	100	77.078	Pundamilia_nyererei
ENSSLDG00000002525	ssb	100	59.951	ENSPNAG00000011708	ssb	100	59.951	Pygocentrus_nattereri
ENSSLDG00000002525	ssb	100	51.500	ENSRNOG00000011606	AABR07061825.1	99	51.500	Rattus_norvegicus
ENSSLDG00000002525	ssb	100	50.605	ENSRNOG00000007998	Ssb	99	50.847	Rattus_norvegicus
ENSSLDG00000002525	ssb	99	40.152	ENSRBIG00000029918	-	97	40.152	Rhinopithecus_bieti
ENSSLDG00000002525	ssb	100	51.407	ENSRBIG00000041972	SSB	88	66.087	Rhinopithecus_bieti
ENSSLDG00000002525	ssb	94	47.778	ENSRBIG00000041232	-	98	47.778	Rhinopithecus_bieti
ENSSLDG00000002525	ssb	86	51.873	ENSRBIG00000041608	-	94	50.144	Rhinopithecus_bieti
ENSSLDG00000002525	ssb	100	55.583	ENSRROG00000040346	SSB	99	55.583	Rhinopithecus_roxellana
ENSSLDG00000002525	ssb	98	48.011	ENSRROG00000031684	-	99	48.011	Rhinopithecus_roxellana
ENSSLDG00000002525	ssb	99	45.202	ENSRROG00000007149	-	97	45.202	Rhinopithecus_roxellana
ENSSLDG00000002525	ssb	86	53.890	ENSRROG00000034102	-	96	49.746	Rhinopithecus_roxellana
ENSSLDG00000002525	ssb	100	55.335	ENSSBOG00000027204	SSB	99	55.335	Saimiri_boliviensis_boliviensis
ENSSLDG00000002525	ssb	100	55.941	ENSSHAG00000018062	SSB	99	55.693	Sarcophilus_harrisii
ENSSLDG00000002525	ssb	100	68.069	ENSSFOG00015000550	ssb	99	68.069	Scleropages_formosus
ENSSLDG00000002525	ssb	100	89.974	ENSSMAG00000013885	ssb	100	89.710	Scophthalmus_maximus
ENSSLDG00000002525	ssb	100	94.472	ENSSDUG00000020117	ssb	100	94.472	Seriola_dumerili
ENSSLDG00000002525	ssb	95	50.656	ENSSARG00000007747	SSB	99	50.394	Sorex_araneus
ENSSLDG00000002525	ssb	100	58.519	ENSSPUG00000012112	SSB	99	58.272	Sphenodon_punctatus
ENSSLDG00000002525	ssb	100	84.422	ENSSPAG00000005696	ssb	100	84.171	Stegastes_partitus
ENSSLDG00000002525	ssb	94	51.475	ENSSSCG00000015938	SSB	93	51.475	Sus_scrofa
ENSSLDG00000002525	ssb	95	55.325	ENSTGUG00000007942	SSB	99	55.172	Taeniopygia_guttata
ENSSLDG00000002525	ssb	100	81.566	ENSTRUG00000017839	ssb	100	81.566	Takifugu_rubripes
ENSSLDG00000002525	ssb	92	77.384	ENSTNIG00000000915	ssb	100	75.890	Tetraodon_nigroviridis
ENSSLDG00000002525	ssb	81	66.087	ENSTBEG00000009056	SSB	81	66.087	Tupaia_belangeri
ENSSLDG00000002525	ssb	100	55.831	ENSTTRG00000002152	SSB	99	55.831	Tursiops_truncatus
ENSSLDG00000002525	ssb	94	55.851	ENSUAMG00000027833	SSB	99	55.851	Ursus_americanus
ENSSLDG00000002525	ssb	100	54.208	ENSUMAG00000013907	SSB	99	54.703	Ursus_maritimus
ENSSLDG00000002525	ssb	100	55.500	ENSVPAG00000007183	SSB	99	55.500	Vicugna_pacos
ENSSLDG00000002525	ssb	100	54.703	ENSVVUG00000016573	SSB	77	54.455	Vulpes_vulpes
ENSSLDG00000002525	ssb	99	51.059	ENSXETG00000025402	ssb	99	51.059	Xenopus_tropicalis
ENSSLDG00000002525	ssb	93	78.689	ENSXCOG00000019109	ssb	97	78.962	Xiphophorus_couchianus
ENSSLDG00000002525	ssb	100	79.156	ENSXMAG00000004888	ssb	100	79.404	Xiphophorus_maculatus