EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000002710 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 1790 bases
Position: chrPEQF01099025.1:140012-141801
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000003427	RRM_1	PF00076.22	1.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000003545	-	186	-	ENSSLDP00000003427	61 (aa)	-	-

Gene Model

Click here to download ENSSLDG00000002710's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000002710's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000002710	-	90	90.909	ENSSLDG00000000417	-	74	90.909

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000002710	-	93	82.759	ENSG00000154548	SRSF12	54	72.727	Homo_sapiens
ENSSLDG00000002710	-	100	95.161	ENSAPOG00000024545	-	97	95.161	Acanthochromis_polyacanthus
ENSSLDG00000002710	-	100	95.161	ENSACIG00000018697	-	91	95.161	Amphilophus_citrinellus
ENSSLDG00000002710	-	97	90.000	ENSACIG00000001537	-	86	90.000	Amphilophus_citrinellus
ENSSLDG00000002710	-	97	88.136	ENSAPEG00000016160	-	85	88.136	Amphiprion_percula
ENSSLDG00000002710	-	100	85.484	ENSATEG00000003493	-	86	85.484	Anabas_testudineus
ENSSLDG00000002710	-	98	88.525	ENSAMXG00000031867	-	88	88.525	Astyanax_mexicanus
ENSSLDG00000002710	-	93	72.414	ENSCHIG00000011877	-	76	72.414	Capra_hircus
ENSSLDG00000002710	-	98	85.246	ENSCHIG00000023999	-	88	85.246	Capra_hircus
ENSSLDG00000002710	-	97	85.000	ENSDARG00000112572	CR293507.1	100	85.000	Danio_rerio
ENSSLDG00000002710	-	89	89.091	ENSFHEG00000000365	-	50	89.091	Fundulus_heteroclitus
ENSSLDG00000002710	-	100	88.710	ENSHCOG00000005897	-	91	88.710	Hippocampus_comes
ENSSLDG00000002710	-	95	88.136	ENSHCOG00000008417	-	68	88.136	Hippocampus_comes
ENSSLDG00000002710	-	97	88.333	ENSIPUG00000023118	-	57	88.333	Ictalurus_punctatus
ENSSLDG00000002710	-	97	88.333	ENSLBEG00000012669	-	91	88.333	Labrus_bergylta
ENSSLDG00000002710	-	90	89.286	ENSMAMG00000008111	-	85	89.286	Mastacembelus_armatus
ENSSLDG00000002710	-	97	89.831	ENSMAMG00000007646	-	67	89.831	Mastacembelus_armatus
ENSSLDG00000002710	-	93	84.483	ENSMAUG00000009812	-	85	84.483	Mesocricetus_auratus
ENSSLDG00000002710	-	97	90.000	ENSMMOG00000013350	-	86	90.000	Mola_mola
ENSSLDG00000002710	-	100	95.161	ENSNBRG00000010616	-	89	95.161	Neolamprologus_brichardi
ENSSLDG00000002710	-	92	82.456	ENSODEG00000003118	-	80	82.456	Octodon_degus
ENSSLDG00000002710	-	89	81.818	ENSODEG00000000894	-	81	81.818	Octodon_degus
ENSSLDG00000002710	-	97	90.000	ENSPKIG00000000613	-	67	90.000	Paramormyrops_kingsleyae
ENSSLDG00000002710	-	93	79.310	ENSPEMG00000021564	-	81	79.310	Peromyscus_maniculatus_bairdii
ENSSLDG00000002710	-	98	86.885	ENSPNAG00000009501	-	92	86.885	Pygocentrus_nattereri
ENSSLDG00000002710	-	93	84.483	ENSSMAG00000018546	-	77	84.483	Scophthalmus_maximus
ENSSLDG00000002710	-	98	82.540	ENSSPUG00000016216	-	94	82.540	Sphenodon_punctatus
ENSSLDG00000002710	-	97	90.000	ENSSPAG00000001821	-	86	90.000	Stegastes_partitus
ENSSLDG00000002710	-	98	88.525	ENSTRUG00000019904	-	84	88.525	Takifugu_rubripes