EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000002735 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 545 bases
Position: chrPEQF01005762.1:438-982
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000003457	RRM_1	PF00076.22	3.5e-33	1	2
ENSSLDP00000003457	RRM_1	PF00076.22	3.5e-33	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000003578	-	432	-	ENSSLDP00000003457	144 (aa)	-	-

Gene Model

Click here to download ENSSLDG00000002735's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000002735's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000002735	-	91	31.852	ENSSLDG00000014625	-	84	31.852
ENSSLDG00000002735	-	94	74.265	ENSSLDG00000011661	pabpc1a	52	74.265
ENSSLDG00000002735	-	91	33.582	ENSSLDG00000011450	tia1l	61	32.836
ENSSLDG00000002735	-	91	34.074	ENSSLDG00000020001	tial1	63	34.074
ENSSLDG00000002735	-	94	69.853	ENSSLDG00000006981	pabpc1l	59	68.376
ENSSLDG00000002735	-	94	73.529	ENSSLDG00000014156	pabpc1b	53	73.529

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000002735	-	94	75.556	ENSCING00000024279	-	87	75.556	Ciona_intestinalis
ENSSLDG00000002735	-	96	74.242	FBgn0265297	pAbp	52	74.242	Drosophila_melanogaster
ENSSLDG00000002735	-	87	60.800	ENSIPUG00000024435	-	87	60.800	Ictalurus_punctatus