EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000002757 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 2288 bases
Position: chrPEQF01098966.1:617834-620121
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000003483	MMR_HSR1	PF01926.23	9.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000003603	-	639	-	ENSSLDP00000003483	212 (aa)	-	-

Gene Model

Click here to download ENSSLDG00000002757's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000002757's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000002757	-	77	31.325	ENSSLDG00000012627	hrasb	85	31.325
ENSSLDG00000002757	-	83	33.163	ENSSLDG00000024730	rasl10a	97	34.184
ENSSLDG00000002757	-	98	81.250	ENSSLDG00000017618	rasd4	100	81.250
ENSSLDG00000002757	-	74	33.540	ENSSLDG00000022533	rab30	77	33.540
ENSSLDG00000002757	-	76	32.927	ENSSLDG00000018681	rheb	87	32.927
ENSSLDG00000002757	-	79	30.952	ENSSLDG00000015289	-	79	30.952
ENSSLDG00000002757	-	78	31.176	ENSSLDG00000022168	kras	87	31.176
ENSSLDG00000002757	-	52	38.739	ENSSLDG00000014472	-	85	40.164
ENSSLDG00000002757	-	73	32.258	ENSSLDG00000003631	si:dkey-16l2.16	73	32.258
ENSSLDG00000002757	-	79	30.058	ENSSLDG00000022004	rab33a	61	30.058
ENSSLDG00000002757	-	98	60.377	ENSSLDG00000016267	rasd3	98	60.377
ENSSLDG00000002757	-	70	35.099	ENSSLDG00000021833	si:ch73-116o1.2	81	35.673
ENSSLDG00000002757	-	91	33.679	ENSSLDG00000013333	si:cabz01085950.1	94	33.679
ENSSLDG00000002757	-	76	34.320	ENSSLDG00000021984	RAB15	77	34.320
ENSSLDG00000002757	-	76	32.121	ENSSLDG00000004352	-	77	32.121
ENSSLDG00000002757	-	78	36.970	ENSSLDG00000015122	rras2	81	36.747
ENSSLDG00000002757	-	73	30.128	ENSSLDG00000012474	rab6bb	72	30.128
ENSSLDG00000002757	-	84	30.688	ENSSLDG00000020730	nkiras1	95	30.688
ENSSLDG00000002757	-	75	31.677	ENSSLDG00000025169	rhebl1	85	31.677
ENSSLDG00000002757	-	75	31.677	ENSSLDG00000023317	rab15	75	31.677
ENSSLDG00000002757	-	79	32.203	ENSSLDG00000003489	rasl11a	68	32.203

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000002757	-	98	97.596	ENSAPOG00000013337	rasd4	100	97.596	Acanthochromis_polyacanthus
ENSSLDG00000002757	-	98	59.906	ENSAPOG00000019479	rasd3	100	59.906	Acanthochromis_polyacanthus
ENSSLDG00000002757	-	98	79.808	ENSAPOG00000014798	-	100	79.808	Acanthochromis_polyacanthus
ENSSLDG00000002757	-	98	96.154	ENSACIG00000008211	rasd4	100	96.154	Amphilophus_citrinellus
ENSSLDG00000002757	-	98	81.731	ENSACIG00000006211	-	100	81.731	Amphilophus_citrinellus
ENSSLDG00000002757	-	98	79.808	ENSAOCG00000013791	-	100	79.808	Amphiprion_ocellaris
ENSSLDG00000002757	-	98	98.077	ENSAOCG00000011925	rasd4	100	98.077	Amphiprion_ocellaris
ENSSLDG00000002757	-	98	98.077	ENSAPEG00000001236	rasd4	100	98.077	Amphiprion_percula
ENSSLDG00000002757	-	98	79.808	ENSAPEG00000014385	-	100	79.808	Amphiprion_percula
ENSSLDG00000002757	-	98	79.808	ENSATEG00000004140	rasd4	100	79.808	Anabas_testudineus
ENSSLDG00000002757	-	98	96.154	ENSATEG00000004192	-	100	96.154	Anabas_testudineus
ENSSLDG00000002757	-	98	95.673	ENSACLG00000005453	-	100	95.673	Astatotilapia_calliptera
ENSSLDG00000002757	-	99	94.762	ENSCSEG00000003581	rasd4	99	94.762	Cynoglossus_semilaevis
ENSSLDG00000002757	-	98	77.404	ENSCSEG00000017910	-	100	77.404	Cynoglossus_semilaevis
ENSSLDG00000002757	-	98	90.821	ENSCVAG00000004658	rasd4	99	90.821	Cyprinodon_variegatus
ENSSLDG00000002757	-	98	76.923	ENSCVAG00000014662	-	100	76.923	Cyprinodon_variegatus
ENSSLDG00000002757	-	88	50.262	FBgn0040370	CG13375	69	50.262	Drosophila_melanogaster
ENSSLDG00000002757	-	83	48.023	ENSEBUG00000013908	rasd3	84	48.023	Eptatretus_burgeri
ENSSLDG00000002757	-	98	86.256	ENSELUG00000008115	-	100	86.256	Esox_lucius
ENSSLDG00000002757	-	99	74.286	ENSFALG00000000852	-	100	74.286	Ficedula_albicollis
ENSSLDG00000002757	-	98	75.481	ENSFHEG00000016103	-	100	75.481	Fundulus_heteroclitus
ENSSLDG00000002757	-	98	92.788	ENSFHEG00000003385	rasd4	100	92.788	Fundulus_heteroclitus
ENSSLDG00000002757	-	98	93.269	ENSGAFG00000010126	rasd4	100	93.269	Gambusia_affinis
ENSSLDG00000002757	-	98	94.231	ENSGACG00000019357	rasd4	100	94.231	Gasterosteus_aculeatus
ENSSLDG00000002757	-	99	80.476	ENSGAGG00000022039	-	100	80.476	Gopherus_agassizii
ENSSLDG00000002757	-	98	95.673	ENSHBUG00000003805	-	100	95.673	Haplochromis_burtoni
ENSSLDG00000002757	-	98	76.442	ENSHCOG00000015161	-	100	76.442	Hippocampus_comes
ENSSLDG00000002757	-	98	86.538	ENSHCOG00000018554	rasd4	100	86.538	Hippocampus_comes
ENSSLDG00000002757	-	98	77.885	ENSIPUG00000021888	-	100	77.885	Ictalurus_punctatus
ENSSLDG00000002757	-	98	95.192	ENSKMAG00000000984	rasd4	100	95.192	Kryptolebias_marmoratus
ENSSLDG00000002757	-	98	80.769	ENSLACG00000001282	-	100	80.769	Latimeria_chalumnae
ENSSLDG00000002757	-	98	74.519	ENSLACG00000003581	rasd3	100	74.519	Latimeria_chalumnae
ENSSLDG00000002757	-	98	79.808	ENSLOCG00000017761	rasd4	100	79.808	Lepisosteus_oculatus
ENSSLDG00000002757	-	98	72.038	ENSLOCG00000018104	rasd3	100	72.038	Lepisosteus_oculatus
ENSSLDG00000002757	-	98	94.712	ENSMAMG00000001194	-	100	94.712	Mastacembelus_armatus
ENSSLDG00000002757	-	98	95.673	ENSMZEG00005023931	-	100	95.673	Maylandia_zebra
ENSSLDG00000002757	-	98	80.288	ENSMMOG00000012444	rasd4	100	80.288	Mola_mola
ENSSLDG00000002757	-	98	94.712	ENSMALG00000022582	-	100	94.712	Monopterus_albus
ENSSLDG00000002757	-	98	80.769	ENSMALG00000019233	rasd4	100	80.769	Monopterus_albus
ENSSLDG00000002757	-	98	82.212	ENSNBRG00000001521	-	100	82.212	Neolamprologus_brichardi
ENSSLDG00000002757	-	98	96.635	ENSONIG00000021230	-	100	96.635	Oreochromis_niloticus
ENSSLDG00000002757	-	98	91.346	ENSORLG00020019402	rasd4	100	91.346	Oryzias_latipes_hni
ENSSLDG00000002757	-	98	91.346	ENSORLG00015019530	rasd4	100	91.346	Oryzias_latipes_hsok
ENSSLDG00000002757	-	98	72.596	ENSOMEG00000019524	-	100	72.596	Oryzias_melastigma
ENSSLDG00000002757	-	98	91.827	ENSOMEG00000010545	rasd4	100	91.827	Oryzias_melastigma
ENSSLDG00000002757	-	98	60.664	ENSPKIG00000018772	-	100	60.664	Paramormyrops_kingsleyae
ENSSLDG00000002757	-	98	83.173	ENSPKIG00000007853	rasd4	100	83.173	Paramormyrops_kingsleyae
ENSSLDG00000002757	-	98	68.246	ENSPKIG00000013103	rasd3	100	68.246	Paramormyrops_kingsleyae
ENSSLDG00000002757	-	99	77.619	ENSPSIG00000001290	-	100	77.619	Pelodiscus_sinensis
ENSSLDG00000002757	-	98	87.019	ENSPMGG00000000859	rasd4	100	87.019	Periophthalmus_magnuspinnatus
ENSSLDG00000002757	-	98	81.250	ENSPMGG00000012580	-	100	81.250	Periophthalmus_magnuspinnatus
ENSSLDG00000002757	-	99	93.810	ENSPLAG00000003951	rasd4	99	93.810	Poecilia_latipinna
ENSSLDG00000002757	-	98	74.038	ENSPLAG00000006115	-	100	74.038	Poecilia_latipinna
ENSSLDG00000002757	-	98	75.000	ENSPMEG00000003690	-	100	75.000	Poecilia_mexicana
ENSSLDG00000002757	-	99	94.286	ENSPMEG00000021391	rasd4	99	94.286	Poecilia_mexicana
ENSSLDG00000002757	-	98	75.000	ENSPREG00000015955	-	100	75.000	Poecilia_reticulata
ENSSLDG00000002757	-	98	94.231	ENSPREG00000017010	rasd4	100	94.231	Poecilia_reticulata
ENSSLDG00000002757	-	98	95.673	ENSPNYG00000016378	-	100	95.673	Pundamilia_nyererei
ENSSLDG00000002757	-	98	84.615	ENSPNAG00000005318	-	100	84.615	Pygocentrus_nattereri
ENSSLDG00000002757	-	98	87.500	ENSSFOG00015004613	rasd4	100	87.500	Scleropages_formosus
ENSSLDG00000002757	-	98	66.351	ENSSFOG00015008777	rasd3	99	66.351	Scleropages_formosus
ENSSLDG00000002757	-	98	94.231	ENSSMAG00000016456	rasd4	100	94.231	Scophthalmus_maximus
ENSSLDG00000002757	-	98	79.327	ENSSMAG00000009101	-	100	79.327	Scophthalmus_maximus
ENSSLDG00000002757	-	98	81.250	ENSSDUG00000015982	rasd4	100	81.250	Seriola_dumerili
ENSSLDG00000002757	-	98	99.519	ENSSDUG00000020340	-	100	99.519	Seriola_dumerili
ENSSLDG00000002757	-	98	97.596	ENSSPAG00000021839	rasd4	100	97.596	Stegastes_partitus
ENSSLDG00000002757	-	98	80.288	ENSSPAG00000011401	-	100	80.288	Stegastes_partitus
ENSSLDG00000002757	-	99	76.667	ENSTGUG00000007747	-	100	76.667	Taeniopygia_guttata
ENSSLDG00000002757	-	98	93.750	ENSTRUG00000022489	rasd4	100	93.750	Takifugu_rubripes
ENSSLDG00000002757	-	98	94.231	ENSXCOG00000013226	rasd4	100	94.231	Xiphophorus_couchianus
ENSSLDG00000002757	-	93	81.517	ENSXMAG00000021609	rasd4	99	81.517	Xiphophorus_maculatus