EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000002776 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 6424 bases
Position: chrPEQF01099039.1:105132-111555
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000003498	zf-C2H2	PF00096.26	1.4e-50	1	8
ENSSLDP00000003498	zf-C2H2	PF00096.26	1.4e-50	2	8
ENSSLDP00000003498	zf-C2H2	PF00096.26	1.4e-50	3	8
ENSSLDP00000003498	zf-C2H2	PF00096.26	1.4e-50	4	8
ENSSLDP00000003498	zf-C2H2	PF00096.26	1.4e-50	5	8
ENSSLDP00000003498	zf-C2H2	PF00096.26	1.4e-50	6	8
ENSSLDP00000003498	zf-C2H2	PF00096.26	1.4e-50	7	8
ENSSLDP00000003498	zf-C2H2	PF00096.26	1.4e-50	8	8
ENSSLDP00000003498	zf-met	PF12874.7	2.4e-07	1	2
ENSSLDP00000003498	zf-met	PF12874.7	2.4e-07	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000003619	-	3668	-	ENSSLDP00000003498	666 (aa)	-	-

Gene Model

Click here to download ENSSLDG00000002776's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000002776's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000002776	-	68	46.000	ENSSLDG00000004098	-	98	46.000
ENSSLDG00000002776	-	80	36.628	ENSSLDG00000006288	-	98	35.496
ENSSLDG00000002776	-	99	46.809	ENSSLDG00000021278	-	99	46.809
ENSSLDG00000002776	-	67	40.991	ENSSLDG00000014177	zbtb47b	80	40.991
ENSSLDG00000002776	-	69	36.981	ENSSLDG00000005839	-	61	36.981
ENSSLDG00000002776	-	69	46.053	ENSSLDG00000006994	-	94	34.052
ENSSLDG00000002776	-	68	41.667	ENSSLDG00000018273	-	95	41.667
ENSSLDG00000002776	-	67	38.596	ENSSLDG00000009821	-	80	37.647
ENSSLDG00000002776	-	63	41.791	ENSSLDG00000025359	-	55	41.096
ENSSLDG00000002776	-	78	31.448	ENSSLDG00000024295	ZNF319	86	34.688
ENSSLDG00000002776	-	63	47.059	ENSSLDG00000001787	zbtb24	94	47.059
ENSSLDG00000002776	-	72	43.810	ENSSLDG00000017937	-	98	43.810
ENSSLDG00000002776	-	87	34.727	ENSSLDG00000020675	-	96	39.506
ENSSLDG00000002776	-	66	45.000	ENSSLDG00000001860	-	80	45.000
ENSSLDG00000002776	-	73	36.641	ENSSLDG00000003269	znf710b	55	34.483
ENSSLDG00000002776	-	64	50.877	ENSSLDG00000015049	-	99	50.877
ENSSLDG00000002776	-	76	45.033	ENSSLDG00000025676	-	66	45.033
ENSSLDG00000002776	-	77	39.286	ENSSLDG00000005850	-	93	46.875
ENSSLDG00000002776	-	68	43.275	ENSSLDG00000008645	-	87	43.275
ENSSLDG00000002776	-	71	43.636	ENSSLDG00000005670	-	93	43.636
ENSSLDG00000002776	-	68	35.443	ENSSLDG00000006406	-	53	35.152
ENSSLDG00000002776	-	80	45.294	ENSSLDG00000021127	-	56	45.294
ENSSLDG00000002776	-	67	43.023	ENSSLDG00000006724	-	92	43.023
ENSSLDG00000002776	-	67	45.324	ENSSLDG00000012036	-	99	45.324
ENSSLDG00000002776	-	73	38.688	ENSSLDG00000016317	-	79	38.514
ENSSLDG00000002776	-	69	45.695	ENSSLDG00000006217	-	86	45.695
ENSSLDG00000002776	-	73	41.818	ENSSLDG00000007524	-	81	40.496
ENSSLDG00000002776	-	73	38.132	ENSSLDG00000020455	-	96	40.789
ENSSLDG00000002776	-	64	45.890	ENSSLDG00000010190	-	79	45.890
ENSSLDG00000002776	-	69	32.500	ENSSLDG00000018521	znf646	84	32.500
ENSSLDG00000002776	-	76	34.336	ENSSLDG00000004485	-	66	33.835
ENSSLDG00000002776	-	67	42.574	ENSSLDG00000020727	-	98	38.418
ENSSLDG00000002776	-	71	43.243	ENSSLDG00000012320	-	99	43.243
ENSSLDG00000002776	-	71	32.426	ENSSLDG00000013353	prdm5	73	37.313
ENSSLDG00000002776	-	77	39.732	ENSSLDG00000000352	-	89	38.281
ENSSLDG00000002776	-	74	44.715	ENSSLDG00000007756	-	96	44.715
ENSSLDG00000002776	-	75	33.725	ENSSLDG00000001850	-	79	33.725
ENSSLDG00000002776	-	70	39.595	ENSSLDG00000018493	-	83	39.516
ENSSLDG00000002776	-	75	44.615	ENSSLDG00000004005	-	75	44.615
ENSSLDG00000002776	-	67	48.571	ENSSLDG00000000432	-	83	48.571
ENSSLDG00000002776	-	64	47.191	ENSSLDG00000009582	-	98	47.191
ENSSLDG00000002776	-	68	42.647	ENSSLDG00000018598	-	98	42.647
ENSSLDG00000002776	-	64	48.000	ENSSLDG00000018033	-	60	48.000
ENSSLDG00000002776	-	67	35.185	ENSSLDG00000023060	-	69	35.185
ENSSLDG00000002776	-	77	31.157	ENSSLDG00000014166	znf319b	82	32.898
ENSSLDG00000002776	-	76	40.541	ENSSLDG00000013170	zbtb17	86	40.708
ENSSLDG00000002776	-	70	47.674	ENSSLDG00000000202	-	90	47.674
ENSSLDG00000002776	-	62	52.500	ENSSLDG00000000203	-	91	46.575
ENSSLDG00000002776	-	73	38.462	ENSSLDG00000002515	-	69	38.462
ENSSLDG00000002776	-	69	42.411	ENSSLDG00000020432	-	88	42.411
ENSSLDG00000002776	-	68	36.937	ENSSLDG00000025265	znf526	64	36.937
ENSSLDG00000002776	-	76	32.035	ENSSLDG00000004428	PRDM15	55	32.035
ENSSLDG00000002776	-	79	53.846	ENSSLDG00000014465	-	63	53.846
ENSSLDG00000002776	-	65	34.328	ENSSLDG00000012852	snai2	62	34.328
ENSSLDG00000002776	-	75	35.402	ENSSLDG00000000376	-	81	34.943
ENSSLDG00000002776	-	73	36.422	ENSSLDG00000017718	zbtb48	63	36.422
ENSSLDG00000002776	-	68	40.854	ENSSLDG00000016512	gfi1aa	55	40.854
ENSSLDG00000002776	-	68	42.857	ENSSLDG00000005999	-	66	42.857
ENSSLDG00000002776	-	68	35.165	ENSSLDG00000000457	-	97	31.471
ENSSLDG00000002776	-	70	30.576	ENSSLDG00000011849	-	75	30.576
ENSSLDG00000002776	-	73	39.474	ENSSLDG00000004756	-	99	38.596
ENSSLDG00000002776	-	81	44.000	ENSSLDG00000002756	-	93	44.000
ENSSLDG00000002776	-	67	41.667	ENSSLDG00000017614	-	95	41.667
ENSSLDG00000002776	-	69	38.298	ENSSLDG00000023661	-	85	38.298
ENSSLDG00000002776	-	73	49.412	ENSSLDG00000013760	-	96	49.425
ENSSLDG00000002776	-	78	43.043	ENSSLDG00000012133	-	94	39.224
ENSSLDG00000002776	-	72	44.037	ENSSLDG00000007568	-	97	44.037
ENSSLDG00000002776	-	70	39.412	ENSSLDG00000014436	-	72	39.412
ENSSLDG00000002776	-	69	45.695	ENSSLDG00000005868	-	88	45.695
ENSSLDG00000002776	-	67	43.902	ENSSLDG00000010390	-	85	43.902
ENSSLDG00000002776	-	73	39.850	ENSSLDG00000017166	scrt1b	70	39.850
ENSSLDG00000002776	-	73	39.000	ENSSLDG00000012821	znf236	77	36.667
ENSSLDG00000002776	-	71	40.314	ENSSLDG00000020655	-	59	40.314
ENSSLDG00000002776	-	68	42.763	ENSSLDG00000000859	-	89	42.763
ENSSLDG00000002776	-	66	44.954	ENSSLDG00000009061	-	92	35.644
ENSSLDG00000002776	-	67	44.444	ENSSLDG00000020990	-	60	44.444
ENSSLDG00000002776	-	77	35.714	ENSSLDG00000016301	-	95	35.714
ENSSLDG00000002776	-	68	42.029	ENSSLDG00000013823	gfi1b	51	40.690
ENSSLDG00000002776	-	74	37.788	ENSSLDG00000015116	-	82	37.788

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000002776	-	76	35.000	ENSAPEG00000021575	-	65	36.000	Amphiprion_percula
ENSSLDG00000002776	-	100	67.627	ENSACLG00000017925	-	100	68.142	Astatotilapia_calliptera
ENSSLDG00000002776	-	72	42.857	ENSAMXG00000041609	-	94	42.857	Astyanax_mexicanus
ENSSLDG00000002776	-	73	44.286	ENSAMXG00000037709	-	94	44.286	Astyanax_mexicanus
ENSSLDG00000002776	-	67	38.710	ENSCSAVG00000007918	-	100	38.642	Ciona_savignyi
ENSSLDG00000002776	-	100	67.764	ENSHBUG00000002307	-	100	67.764	Haplochromis_burtoni
ENSSLDG00000002776	-	69	38.279	ENSHBUG00000012007	-	72	38.279	Haplochromis_burtoni
ENSSLDG00000002776	-	100	67.764	ENSMZEG00005024424	-	100	68.289	Maylandia_zebra
ENSSLDG00000002776	-	76	36.139	ENSOANG00000005971	-	73	36.139	Ornithorhynchus_anatinus
ENSSLDG00000002776	-	71	38.372	ENSPMEG00000014701	-	73	42.945	Poecilia_mexicana
ENSSLDG00000002776	-	100	99.249	ENSSDUG00000002174	-	100	99.249	Seriola_dumerili
ENSSLDG00000002776	-	72	38.486	ENSSPAG00000008958	-	91	38.170	Stegastes_partitus
ENSSLDG00000002776	-	69	39.344	ENSTGUG00000015090	-	100	39.344	Taeniopygia_guttata