EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000002801 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 4930 bases
Position: chrPEQF01006015.1:3993-8922
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000003555	NUFIP2	PF15293.6	5.9e-228	1	1
ENSSLDP00000003543	NUFIP2	PF15293.6	3.5e-217	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000003665	-	3190	-	ENSSLDP00000003543	639 (aa)	-	-
ENSSLDT00000003678	-	1845	-	ENSSLDP00000003555	614 (aa)	-	-

Gene Model

Click here to download ENSSLDG00000002801's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000002801's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000002801	-	97	98.993	ENSSLDG00000017125	nufip2	98	98.993
ENSSLDG00000002801	-	100	100.000	ENSSLDG00000019585	-	100	100.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000002801	-	99	85.669	ENSAPOG00000001684	nufip2	99	85.827	Acanthochromis_polyacanthus
ENSSLDG00000002801	-	82	87.572	ENSACIG00000009546	nufip2	95	87.572	Amphilophus_citrinellus
ENSSLDG00000002801	-	99	85.039	ENSAOCG00000010199	nufip2	99	85.197	Amphiprion_ocellaris
ENSSLDG00000002801	-	99	85.197	ENSAPEG00000007671	nufip2	99	85.354	Amphiprion_percula
ENSSLDG00000002801	-	85	82.385	ENSATEG00000010578	nufip2	99	82.385	Anabas_testudineus
ENSSLDG00000002801	-	99	79.685	ENSACLG00000007723	nufip2	99	79.685	Astatotilapia_calliptera
ENSSLDG00000002801	-	52	50.410	ENSAMXG00000037065	-	84	50.410	Astyanax_mexicanus
ENSSLDG00000002801	-	100	43.563	ENSAMXG00000005256	nufip2	99	43.563	Astyanax_mexicanus
ENSSLDG00000002801	-	98	73.077	ENSCSEG00000013571	nufip2	96	73.077	Cynoglossus_semilaevis
ENSSLDG00000002801	-	99	71.811	ENSCVAG00000016933	nufip2	99	71.811	Cyprinodon_variegatus
ENSSLDG00000002801	-	99	44.377	ENSDARG00000069066	nufip2	99	44.377	Danio_rerio
ENSSLDG00000002801	-	99	36.000	ENSELUG00000016053	nufip2	98	36.154	Esox_lucius
ENSSLDG00000002801	-	99	56.832	ENSELUG00000011669	-	99	56.832	Esox_lucius
ENSSLDG00000002801	-	99	69.291	ENSFHEG00000002824	nufip2	99	69.606	Fundulus_heteroclitus
ENSSLDG00000002801	-	99	72.240	ENSGAFG00000006956	nufip2	98	72.814	Gambusia_affinis
ENSSLDG00000002801	-	96	78.896	ENSGACG00000020300	nufip2	89	79.058	Gasterosteus_aculeatus
ENSSLDG00000002801	-	99	79.528	ENSHBUG00000020850	nufip2	99	79.528	Haplochromis_burtoni
ENSSLDG00000002801	-	97	66.886	ENSHCOG00000009174	nufip2	98	66.886	Hippocampus_comes
ENSSLDG00000002801	-	77	41.734	ENSIPUG00000021088	-	95	41.734	Ictalurus_punctatus
ENSSLDG00000002801	-	98	40.606	ENSIPUG00000014954	nufip2	97	40.455	Ictalurus_punctatus
ENSSLDG00000002801	-	99	75.079	ENSKMAG00000009435	nufip2	99	75.079	Kryptolebias_marmoratus
ENSSLDG00000002801	-	99	82.390	ENSLBEG00000006983	nufip2	94	88.372	Labrus_bergylta
ENSSLDG00000002801	-	99	79.621	ENSMZEG00005007632	nufip2	98	79.621	Maylandia_zebra
ENSSLDG00000002801	-	97	77.010	ENSMMOG00000008708	nufip2	98	77.010	Mola_mola
ENSSLDG00000002801	-	98	78.176	ENSMALG00000021439	nufip2	96	82.609	Monopterus_albus
ENSSLDG00000002801	-	99	79.370	ENSNBRG00000014643	nufip2	99	79.370	Neolamprologus_brichardi
ENSSLDG00000002801	-	99	79.843	ENSONIG00000012882	nufip2	99	80.000	Oreochromis_niloticus
ENSSLDG00000002801	-	99	66.929	ENSORLG00000009659	nufip2	90	66.929	Oryzias_latipes
ENSSLDG00000002801	-	64	67.460	ENSORLG00020021585	-	95	66.667	Oryzias_latipes_hni
ENSSLDG00000002801	-	81	70.825	ENSORLG00015004627	nufip2	95	71.593	Oryzias_latipes_hsok
ENSSLDG00000002801	-	100	65.888	ENSOMEG00000006136	nufip2	84	65.888	Oryzias_melastigma
ENSSLDG00000002801	-	99	44.211	ENSPKIG00000009841	nufip2	99	44.511	Paramormyrops_kingsleyae
ENSSLDG00000002801	-	99	33.858	ENSPKIG00000005775	-	87	34.488	Paramormyrops_kingsleyae
ENSSLDG00000002801	-	96	68.780	ENSPMGG00000005894	nufip2	93	68.780	Periophthalmus_magnuspinnatus
ENSSLDG00000002801	-	99	71.674	ENSPFOG00000019342	-	93	71.674	Poecilia_formosa
ENSSLDG00000002801	-	99	72.598	ENSPFOG00000022140	nufip2	99	72.598	Poecilia_formosa
ENSSLDG00000002801	-	71	66.744	ENSPLAG00000000565	-	96	66.744	Poecilia_latipinna
ENSSLDG00000002801	-	97	69.132	ENSPLAG00000010927	nufip2	98	69.453	Poecilia_latipinna
ENSSLDG00000002801	-	97	69.132	ENSPLAG00000010752	-	98	69.453	Poecilia_latipinna
ENSSLDG00000002801	-	99	73.502	ENSPMEG00000002658	nufip2	98	73.137	Poecilia_mexicana
ENSSLDG00000002801	-	99	72.913	ENSPMEG00000009520	-	99	72.913	Poecilia_mexicana
ENSSLDG00000002801	-	99	72.756	ENSPREG00000000825	nufip2	99	72.756	Poecilia_reticulata
ENSSLDG00000002801	-	99	79.685	ENSPNYG00000018349	nufip2	99	79.685	Pundamilia_nyererei
ENSSLDG00000002801	-	79	48.944	ENSPNAG00000014891	-	84	48.864	Pygocentrus_nattereri
ENSSLDG00000002801	-	99	43.308	ENSPNAG00000015559	nufip2	99	44.030	Pygocentrus_nattereri
ENSSLDG00000002801	-	99	36.631	ENSSFOG00015021611	-	98	36.631	Scleropages_formosus
ENSSLDG00000002801	-	95	42.013	ENSSFOG00015012069	nufip2	97	42.222	Scleropages_formosus
ENSSLDG00000002801	-	99	81.604	ENSSMAG00000018460	nufip2	98	83.744	Scophthalmus_maximus
ENSSLDG00000002801	-	97	93.355	ENSSDUG00000014471	nufip2	98	93.355	Seriola_dumerili
ENSSLDG00000002801	-	99	86.142	ENSSPAG00000022312	nufip2	99	86.142	Stegastes_partitus
ENSSLDG00000002801	-	96	69.677	ENSTRUG00000011736	nufip2	77	70.161	Takifugu_rubripes
ENSSLDG00000002801	-	96	64.065	ENSTNIG00000011833	nufip2	88	64.065	Tetraodon_nigroviridis
ENSSLDG00000002801	-	99	72.170	ENSXCOG00000006163	nufip2	98	72.742	Xiphophorus_couchianus
ENSSLDG00000002801	-	99	72.414	ENSXMAG00000012404	nufip2	99	72.414	Xiphophorus_maculatus