EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000002856 (Gene tree)
Gene ID: -
Gene Symbol: gpatch1
Alias: im:7135982|wu:fc11h11|wu:fj99h08
Full Name: G-patch domain containing 1
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 6787 bases
Position: chrPEQF01098845.1:30522-37308
Accession: 111656719
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000003692	DUF1604	PF07713.13	3.3e-37	1	1
ENSSLDP00000003661	DUF1604	PF07713.13	3.7e-37	1	1
ENSSLDP00000003692	G-patch	PF01585.23	4.2e-07	1	1
ENSSLDP00000003661	G-patch	PF01585.23	4.8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000003819	-	2526	-	ENSSLDP00000003692	841 (aa)	-	-
ENSSLDT00000003788	-	2659	XM_023408537	ENSSLDP00000003661	883 (aa)	XP_023264305	-

Gene Model

Click here to download ENSSLDG00000002856's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000002856's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000002856	gpatch1	89	53.141	ENSG00000076650	GPATCH1	81	72.115	Homo_sapiens
ENSSLDG00000002856	gpatch1	91	53.285	ENSAMEG00000015575	GPATCH1	81	51.894	Ailuropoda_melanoleuca
ENSSLDG00000002856	gpatch1	92	91.209	ENSAOCG00000006668	gpatch1	81	91.209	Amphiprion_ocellaris
ENSSLDG00000002856	gpatch1	89	78.372	ENSAPEG00000000026	gpatch1	80	79.695	Amphiprion_percula
ENSSLDG00000002856	gpatch1	94	78.487	ENSATEG00000014494	gpatch1	86	79.665	Anabas_testudineus
ENSSLDG00000002856	gpatch1	87	50.879	ENSAPLG00000007584	GPATCH1	85	50.879	Anas_platyrhynchos
ENSSLDG00000002856	gpatch1	94	51.011	ENSANAG00000027002	GPATCH1	82	52.625	Aotus_nancymaae
ENSSLDG00000002856	gpatch1	93	80.383	ENSACLG00000024740	gpatch1	79	81.761	Astatotilapia_calliptera
ENSSLDG00000002856	gpatch1	89	59.486	ENSAMXG00000020177	gpatch1	86	59.124	Astyanax_mexicanus
ENSSLDG00000002856	gpatch1	94	52.302	ENSBTAG00000000721	GPATCH1	81	52.802	Bos_taurus
ENSSLDG00000002856	gpatch1	54	58.824	WBGene00011109	R07E5.1	57	33.423	Caenorhabditis_elegans
ENSSLDG00000002856	gpatch1	94	51.130	ENSCJAG00000000684	GPATCH1	81	52.764	Callithrix_jacchus
ENSSLDG00000002856	gpatch1	89	53.865	ENSCAFG00000007457	GPATCH1	68	52.250	Canis_familiaris
ENSSLDG00000002856	gpatch1	89	53.817	ENSCAFG00020019731	GPATCH1	81	52.250	Canis_lupus_dingo
ENSSLDG00000002856	gpatch1	89	54.286	ENSCHIG00000019626	GPATCH1	83	53.425	Capra_hircus
ENSSLDG00000002856	gpatch1	86	50.257	ENSCAPG00000008827	GPATCH1	81	50.258	Cavia_aperea
ENSSLDG00000002856	gpatch1	89	52.065	ENSCPOG00000024477	GPATCH1	81	51.564	Cavia_porcellus
ENSSLDG00000002856	gpatch1	94	50.177	ENSCCAG00000024676	GPATCH1	82	52.369	Cebus_capucinus
ENSSLDG00000002856	gpatch1	89	52.321	ENSCATG00000043637	GPATCH1	81	73.077	Cercocebus_atys
ENSSLDG00000002856	gpatch1	86	52.393	ENSCLAG00000003395	-	82	52.326	Chinchilla_lanigera
ENSSLDG00000002856	gpatch1	92	50.365	ENSCSAG00000004743	GPATCH1	81	51.005	Chlorocebus_sabaeus
ENSSLDG00000002856	gpatch1	77	60.829	ENSCHOG00000012865	GPATCH1	74	58.986	Choloepus_hoffmanni
ENSSLDG00000002856	gpatch1	86	53.677	ENSCPBG00000000666	GPATCH1	92	53.719	Chrysemys_picta_bellii
ENSSLDG00000002856	gpatch1	88	33.333	ENSCING00000012518	-	70	41.429	Ciona_intestinalis
ENSSLDG00000002856	gpatch1	81	49.886	ENSCANG00000012540	GPATCH1	65	73.643	Colobus_angolensis_palliatus
ENSSLDG00000002856	gpatch1	89	52.919	ENSCGRG00001016736	Gpatch1	83	53.133	Cricetulus_griseus_chok1gshd
ENSSLDG00000002856	gpatch1	86	45.290	ENSCGRG00000005069	Gpatch1	77	44.171	Cricetulus_griseus_crigri
ENSSLDG00000002856	gpatch1	78	64.731	ENSCSEG00000019456	-	88	73.451	Cynoglossus_semilaevis
ENSSLDG00000002856	gpatch1	89	61.111	ENSDARG00000033418	gpatch1	81	61.557	Danio_rerio
ENSSLDG00000002856	gpatch1	92	52.913	ENSDNOG00000005291	GPATCH1	84	53.224	Dasypus_novemcinctus
ENSSLDG00000002856	gpatch1	91	49.499	ENSDORG00000012546	Gpatch1	84	50.260	Dipodomys_ordii
ENSSLDG00000002856	gpatch1	90	30.778	FBgn0036386	CG8833	69	32.609	Drosophila_melanogaster
ENSSLDG00000002856	gpatch1	80	54.758	ENSETEG00000003626	GPATCH1	71	54.801	Echinops_telfairi
ENSSLDG00000002856	gpatch1	92	37.819	ENSEBUG00000011286	gpatch1	83	38.471	Eptatretus_burgeri
ENSSLDG00000002856	gpatch1	98	49.830	ENSEASG00005021162	GPATCH1	88	52.321	Equus_asinus_asinus
ENSSLDG00000002856	gpatch1	93	51.773	ENSECAG00000022743	GPATCH1	79	53.008	Equus_caballus
ENSSLDG00000002856	gpatch1	80	53.365	ENSEEUG00000012925	GPATCH1	72	54.315	Erinaceus_europaeus
ENSSLDG00000002856	gpatch1	90	61.434	ENSELUG00000018195	gpatch1	80	62.516	Esox_lucius
ENSSLDG00000002856	gpatch1	92	50.358	ENSFCAG00000014917	GPATCH1	81	51.247	Felis_catus
ENSSLDG00000002856	gpatch1	89	50.622	ENSFALG00000007821	GPATCH1	81	50.622	Ficedula_albicollis
ENSSLDG00000002856	gpatch1	85	53.723	ENSFDAG00000003871	GPATCH1	82	53.590	Fukomys_damarensis
ENSSLDG00000002856	gpatch1	81	62.812	ENSGMOG00000003830	gpatch1	88	62.585	Gadus_morhua
ENSSLDG00000002856	gpatch1	89	50.560	ENSGALG00000004839	GPATCH1	84	50.250	Gallus_gallus
ENSSLDG00000002856	gpatch1	96	71.577	ENSGACG00000017544	gpatch1	85	72.506	Gasterosteus_aculeatus
ENSSLDG00000002856	gpatch1	89	52.572	ENSGAGG00000010067	GPATCH1	81	51.861	Gopherus_agassizii
ENSSLDG00000002856	gpatch1	89	50.754	ENSGGOG00000010862	GPATCH1	81	51.558	Gorilla_gorilla
ENSSLDG00000002856	gpatch1	93	80.432	ENSHBUG00000023462	gpatch1	80	81.818	Haplochromis_burtoni
ENSSLDG00000002856	gpatch1	91	52.696	ENSHGLG00000009334	GPATCH1	81	52.196	Heterocephalus_glaber_female
ENSSLDG00000002856	gpatch1	91	52.574	ENSHGLG00100018074	GPATCH1	81	52.070	Heterocephalus_glaber_male
ENSSLDG00000002856	gpatch1	89	59.976	ENSIPUG00000014977	gpatch1	81	59.497	Ictalurus_punctatus
ENSSLDG00000002856	gpatch1	92	50.966	ENSSTOG00000003720	GPATCH1	81	52.369	Ictidomys_tridecemlineatus
ENSSLDG00000002856	gpatch1	92	53.688	ENSJJAG00000023765	Gpatch1	81	52.868	Jaculus_jaculus
ENSSLDG00000002856	gpatch1	89	75.819	ENSKMAG00000017950	gpatch1	82	76.448	Kryptolebias_marmoratus
ENSSLDG00000002856	gpatch1	93	77.262	ENSLBEG00000026527	gpatch1	83	76.722	Labrus_bergylta
ENSSLDG00000002856	gpatch1	86	52.881	ENSLACG00000008130	GPATCH1	80	52.185	Latimeria_chalumnae
ENSSLDG00000002856	gpatch1	89	58.809	ENSLOCG00000001800	gpatch1	81	58.189	Lepisosteus_oculatus
ENSSLDG00000002856	gpatch1	92	52.226	ENSLAFG00000013589	GPATCH1	86	52.802	Loxodonta_africana
ENSSLDG00000002856	gpatch1	92	51.582	ENSMFAG00000034418	GPATCH1	81	73.077	Macaca_fascicularis
ENSSLDG00000002856	gpatch1	89	52.823	ENSMMUG00000011790	GPATCH1	81	74.038	Macaca_mulatta
ENSSLDG00000002856	gpatch1	89	52.387	ENSMNEG00000045084	GPATCH1	98	60.294	Macaca_nemestrina
ENSSLDG00000002856	gpatch1	89	44.221	ENSMLEG00000043840	GPATCH1	79	44.221	Mandrillus_leucophaeus
ENSSLDG00000002856	gpatch1	93	80.263	ENSMZEG00005001926	gpatch1	80	81.635	Maylandia_zebra
ENSSLDG00000002856	gpatch1	88	51.005	ENSMGAG00000005775	GPATCH1	81	50.190	Meleagris_gallopavo
ENSSLDG00000002856	gpatch1	92	46.411	ENSMICG00000004829	GPATCH1	83	46.790	Microcebus_murinus
ENSSLDG00000002856	gpatch1	89	52.677	ENSMOCG00000000174	Gpatch1	82	51.478	Microtus_ochrogaster
ENSSLDG00000002856	gpatch1	97	68.295	ENSMMOG00000002140	gpatch1	87	71.235	Mola_mola
ENSSLDG00000002856	gpatch1	89	52.618	ENSMODG00000012226	GPATCH1	81	52.218	Monodelphis_domestica
ENSSLDG00000002856	gpatch1	93	77.033	ENSMALG00000014386	gpatch1	82	77.610	Monopterus_albus
ENSSLDG00000002856	gpatch1	89	51.861	ENSMUSG00000063808	Gpatch1	98	76.042	Mus_musculus
ENSSLDG00000002856	gpatch1	89	51.737	MGP_PahariEiJ_G0012816	Gpatch1	98	77.083	Mus_pahari
ENSSLDG00000002856	gpatch1	89	52.030	MGP_SPRETEiJ_G0030681	Gpatch1	98	77.083	Mus_spretus
ENSSLDG00000002856	gpatch1	89	53.152	ENSMPUG00000007658	GPATCH1	81	51.921	Mustela_putorius_furo
ENSSLDG00000002856	gpatch1	92	51.140	ENSMLUG00000012161	GPATCH1	82	51.621	Myotis_lucifugus
ENSSLDG00000002856	gpatch1	89	52.447	ENSNGAG00000012455	Gpatch1	82	52.264	Nannospalax_galili
ENSSLDG00000002856	gpatch1	89	51.621	ENSNLEG00000007659	GPATCH1	81	72.115	Nomascus_leucogenys
ENSSLDG00000002856	gpatch1	83	47.114	ENSMEUG00000015174	GPATCH1	76	46.577	Notamacropus_eugenii
ENSSLDG00000002856	gpatch1	89	50.807	ENSODEG00000007103	GPATCH1	81	50.875	Octodon_degus
ENSSLDG00000002856	gpatch1	89	80.503	ENSONIG00000003302	gpatch1	81	81.258	Oreochromis_niloticus
ENSSLDG00000002856	gpatch1	92	53.006	ENSOANG00000012732	GPATCH1	82	53.384	Ornithorhynchus_anatinus
ENSSLDG00000002856	gpatch1	93	52.530	ENSOCUG00000015905	GPATCH1	81	53.184	Oryctolagus_cuniculus
ENSSLDG00000002856	gpatch1	94	71.446	ENSORLG00000018706	gpatch1	80	73.155	Oryzias_latipes
ENSSLDG00000002856	gpatch1	96	70.082	ENSOMEG00000022688	gpatch1	82	73.096	Oryzias_melastigma
ENSSLDG00000002856	gpatch1	92	52.467	ENSOGAG00000004016	GPATCH1	96	52.055	Otolemur_garnettii
ENSSLDG00000002856	gpatch1	88	53.750	ENSOARG00000004365	GPATCH1	81	53.008	Ovis_aries
ENSSLDG00000002856	gpatch1	89	52.387	ENSPPAG00000020990	GPATCH1	81	72.642	Pan_paniscus
ENSSLDG00000002856	gpatch1	92	50.489	ENSPPRG00000017245	GPATCH1	81	51.247	Panthera_pardus
ENSSLDG00000002856	gpatch1	92	51.222	ENSPTIG00000019649	GPATCH1	81	51.995	Panthera_tigris_altaica
ENSSLDG00000002856	gpatch1	89	52.387	ENSPTRG00000010803	GPATCH1	81	72.115	Pan_troglodytes
ENSSLDG00000002856	gpatch1	92	51.582	ENSPANG00000012374	GPATCH1	81	73.077	Papio_anubis
ENSSLDG00000002856	gpatch1	89	58.904	ENSPKIG00000020745	gpatch1	77	57.849	Paramormyrops_kingsleyae
ENSSLDG00000002856	gpatch1	89	53.509	ENSPSIG00000013433	GPATCH1	81	52.497	Pelodiscus_sinensis
ENSSLDG00000002856	gpatch1	89	52.927	ENSPEMG00000000636	Gpatch1	81	52.553	Peromyscus_maniculatus_bairdii
ENSSLDG00000002856	gpatch1	89	53.000	ENSPCIG00000021003	GPATCH1	85	52.233	Phascolarctos_cinereus
ENSSLDG00000002856	gpatch1	93	60.750	ENSPREG00000008264	gpatch1	86	60.995	Poecilia_reticulata
ENSSLDG00000002856	gpatch1	89	50.436	ENSPPYG00000009824	GPATCH1	81	50.498	Pongo_abelii
ENSSLDG00000002856	gpatch1	78	49.288	ENSPCAG00000005931	GPATCH1	73	48.315	Procavia_capensis
ENSSLDG00000002856	gpatch1	91	51.790	ENSPCOG00000009674	GPATCH1	87	50.717	Propithecus_coquereli
ENSSLDG00000002856	gpatch1	82	52.782	ENSPVAG00000017767	GPATCH1	76	52.646	Pteropus_vampyrus
ENSSLDG00000002856	gpatch1	93	80.482	ENSPNYG00000018189	gpatch1	89	81.876	Pundamilia_nyererei
ENSSLDG00000002856	gpatch1	89	60.317	ENSPNAG00000013187	gpatch1	81	59.611	Pygocentrus_nattereri
ENSSLDG00000002856	gpatch1	89	52.244	ENSRNOG00000011584	Gpatch1	81	52.488	Rattus_norvegicus
ENSSLDG00000002856	gpatch1	94	44.746	ENSRBIG00000034723	GPATCH1	82	45.761	Rhinopithecus_bieti
ENSSLDG00000002856	gpatch1	94	50.236	ENSRROG00000024428	GPATCH1	81	72.115	Rhinopithecus_roxellana
ENSSLDG00000002856	gpatch1	89	52.889	ENSSBOG00000034650	GPATCH1	81	51.884	Saimiri_boliviensis_boliviensis
ENSSLDG00000002856	gpatch1	94	53.373	ENSSHAG00000016016	GPATCH1	81	52.632	Sarcophilus_harrisii
ENSSLDG00000002856	gpatch1	89	60.100	ENSSFOG00015011535	gpatch1	80	59.897	Scleropages_formosus
ENSSLDG00000002856	gpatch1	93	73.757	ENSSMAG00000002883	gpatch1	89	73.059	Scophthalmus_maximus
ENSSLDG00000002856	gpatch1	97	96.977	ENSSDUG00000007444	gpatch1	87	96.977	Seriola_dumerili
ENSSLDG00000002856	gpatch1	80	55.982	ENSSARG00000004108	GPATCH1	70	55.835	Sorex_araneus
ENSSLDG00000002856	gpatch1	94	51.643	ENSSSCG00000002865	GPATCH1	84	53.240	Sus_scrofa
ENSSLDG00000002856	gpatch1	96	50.059	ENSTGUG00000009401	GPATCH1	82	50.828	Taeniopygia_guttata
ENSSLDG00000002856	gpatch1	89	70.483	ENSTRUG00000025081	gpatch1	81	70.394	Takifugu_rubripes
ENSSLDG00000002856	gpatch1	89	70.356	ENSTRUG00000005785	-	81	70.267	Takifugu_rubripes
ENSSLDG00000002856	gpatch1	89	67.250	ENSTNIG00000002554	gpatch1	97	67.367	Tetraodon_nigroviridis
ENSSLDG00000002856	gpatch1	66	52.198	ENSTBEG00000007750	-	79	51.412	Tupaia_belangeri
ENSSLDG00000002856	gpatch1	87	63.571	ENSTTRG00000012221	GPATCH1	75	62.143	Tursiops_truncatus
ENSSLDG00000002856	gpatch1	94	51.243	ENSUMAG00000014645	GPATCH1	85	72.381	Ursus_maritimus
ENSSLDG00000002856	gpatch1	78	68.208	ENSVPAG00000010313	GPATCH1	75	68.508	Vicugna_pacos
ENSSLDG00000002856	gpatch1	89	53.325	ENSVVUG00000016572	GPATCH1	81	52.447	Vulpes_vulpes
ENSSLDG00000002856	gpatch1	89	46.575	ENSXETG00000018276	gpatch1	84	50.299	Xenopus_tropicalis