EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000002946 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 2212 bases
Position: chrPEQF01098295.1:33757-35968
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000003718	NTF2	PF02136.20	6.7e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000003845	-	432	-	ENSSLDP00000003718	143 (aa)	-	-

Gene Model

Click here to download ENSSLDG00000002946's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000002946's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000002946	-	97	100.000	ENSSLDG00000024416	nxt2	99	100.000
ENSSLDG00000002946	-	97	100.000	ENSSLDG00000001314	nxt2	99	100.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000002946	-	100	74.825	ENSG00000101888	NXT2	99	79.130	Homo_sapiens
ENSSLDG00000002946	-	100	94.406	ENSAPOG00000010308	nxt2	100	94.406	Acanthochromis_polyacanthus
ENSSLDG00000002946	-	99	72.727	ENSAMEG00000017999	NXT2	72	72.727	Ailuropoda_melanoleuca
ENSSLDG00000002946	-	100	92.308	ENSACIG00000015026	nxt2	100	92.308	Amphilophus_citrinellus
ENSSLDG00000002946	-	100	93.706	ENSAOCG00000007411	nxt2	100	93.706	Amphiprion_ocellaris
ENSSLDG00000002946	-	100	93.706	ENSAPEG00000010454	nxt2	100	93.706	Amphiprion_percula
ENSSLDG00000002946	-	100	93.706	ENSATEG00000020315	nxt2	100	93.706	Anabas_testudineus
ENSSLDG00000002946	-	99	70.423	ENSACAG00000012649	NXT2	97	70.423	Anolis_carolinensis
ENSSLDG00000002946	-	99	73.759	ENSANAG00000038165	NXT2	95	76.471	Aotus_nancymaae
ENSSLDG00000002946	-	100	91.608	ENSACLG00000025072	nxt2	100	91.608	Astatotilapia_calliptera
ENSSLDG00000002946	-	99	91.489	ENSAMXG00000031355	nxt2	99	91.489	Astyanax_mexicanus
ENSSLDG00000002946	-	99	71.631	ENSBTAG00000020739	NXT2	98	71.631	Bos_taurus
ENSSLDG00000002946	-	99	74.468	ENSCJAG00000007369	NXT2	70	74.468	Callithrix_jacchus
ENSSLDG00000002946	-	99	73.050	ENSCAFG00000028574	NXT2	70	73.050	Canis_familiaris
ENSSLDG00000002946	-	99	73.050	ENSCAFG00020005721	NXT2	98	73.050	Canis_lupus_dingo
ENSSLDG00000002946	-	99	71.631	ENSCHIG00000000279	NXT2	98	71.631	Capra_hircus
ENSSLDG00000002946	-	99	73.050	ENSTSYG00000001924	NXT2	98	73.050	Carlito_syrichta
ENSSLDG00000002946	-	80	75.652	ENSCPOG00000035559	-	99	75.652	Cavia_porcellus
ENSSLDG00000002946	-	99	74.468	ENSCCAG00000035523	NXT2	70	74.468	Cebus_capucinus
ENSSLDG00000002946	-	100	74.126	ENSCATG00000037402	NXT2	72	74.126	Cercocebus_atys
ENSSLDG00000002946	-	100	69.231	ENSCLAG00000001175	NXT2	72	69.231	Chinchilla_lanigera
ENSSLDG00000002946	-	100	73.427	ENSCSAG00000008842	NXT2	72	73.427	Chlorocebus_sabaeus
ENSSLDG00000002946	-	99	75.177	ENSCPBG00000000629	NXT2	99	75.177	Chrysemys_picta_bellii
ENSSLDG00000002946	-	100	72.727	ENSCANG00000041728	NXT2	72	72.727	Colobus_angolensis_palliatus
ENSSLDG00000002946	-	100	69.231	ENSCGRG00001021749	Nxt2	73	69.231	Cricetulus_griseus_chok1gshd
ENSSLDG00000002946	-	76	69.444	ENSCGRG00000001378	-	98	69.444	Cricetulus_griseus_crigri
ENSSLDG00000002946	-	100	92.308	ENSCSEG00000018710	nxt2	100	92.308	Cynoglossus_semilaevis
ENSSLDG00000002946	-	100	90.909	ENSCVAG00000021187	nxt2	100	90.909	Cyprinodon_variegatus
ENSSLDG00000002946	-	100	88.112	ENSDARG00000061527	nxt2	100	88.321	Danio_rerio
ENSSLDG00000002946	-	96	51.095	ENSDNOG00000043813	-	93	51.095	Dasypus_novemcinctus
ENSSLDG00000002946	-	99	72.340	ENSDNOG00000039271	NXT2	98	72.340	Dasypus_novemcinctus
ENSSLDG00000002946	-	97	69.065	ENSDORG00000010714	Nxt2	99	69.065	Dipodomys_ordii
ENSSLDG00000002946	-	97	66.906	ENSDORG00000013227	-	98	66.906	Dipodomys_ordii
ENSSLDG00000002946	-	99	68.310	ENSETEG00000008002	NXT2	71	68.310	Echinops_telfairi
ENSSLDG00000002946	-	99	73.050	ENSEASG00005019567	NXT2	97	76.991	Equus_asinus_asinus
ENSSLDG00000002946	-	99	73.759	ENSECAG00000015022	NXT2	71	73.759	Equus_caballus
ENSSLDG00000002946	-	94	70.149	ENSEEUG00000005675	-	97	70.149	Erinaceus_europaeus
ENSSLDG00000002946	-	74	77.358	ENSEEUG00000006109	-	63	77.358	Erinaceus_europaeus
ENSSLDG00000002946	-	97	85.612	ENSELUG00000005141	NXT2	97	85.612	Esox_lucius
ENSSLDG00000002946	-	99	73.050	ENSFCAG00000035855	NXT2	70	73.050	Felis_catus
ENSSLDG00000002946	-	99	75.887	ENSFALG00000000178	NXT2	99	75.887	Ficedula_albicollis
ENSSLDG00000002946	-	100	69.231	ENSFDAG00000011646	NXT2	71	69.231	Fukomys_damarensis
ENSSLDG00000002946	-	100	88.811	ENSFHEG00000001982	nxt2	100	88.811	Fundulus_heteroclitus
ENSSLDG00000002946	-	99	83.217	ENSGMOG00000003163	nxt2	99	83.217	Gadus_morhua
ENSSLDG00000002946	-	100	76.224	ENSGALG00000008092	NXT2	100	76.224	Gallus_gallus
ENSSLDG00000002946	-	100	88.811	ENSGAFG00000002714	nxt2	99	91.304	Gambusia_affinis
ENSSLDG00000002946	-	100	90.345	ENSGACG00000018508	nxt2	100	90.345	Gasterosteus_aculeatus
ENSSLDG00000002946	-	99	73.759	ENSGAGG00000017047	NXT2	99	73.759	Gopherus_agassizii
ENSSLDG00000002946	-	100	75.524	ENSGGOG00000013593	NXT2	96	77.536	Gorilla_gorilla
ENSSLDG00000002946	-	100	91.608	ENSHBUG00000002974	nxt2	100	91.608	Haplochromis_burtoni
ENSSLDG00000002946	-	100	72.028	ENSHGLG00000001921	NXT2	99	76.522	Heterocephalus_glaber_female
ENSSLDG00000002946	-	100	69.930	ENSHGLG00100002378	NXT2	99	73.913	Heterocephalus_glaber_male
ENSSLDG00000002946	-	100	89.510	ENSHCOG00000003893	nxt2	99	91.429	Hippocampus_comes
ENSSLDG00000002946	-	99	92.199	ENSIPUG00000000517	nxt2	99	92.199	Ictalurus_punctatus
ENSSLDG00000002946	-	98	72.857	ENSSTOG00000005243	NXT2	97	72.857	Ictidomys_tridecemlineatus
ENSSLDG00000002946	-	99	59.574	ENSJJAG00000023288	-	98	59.574	Jaculus_jaculus
ENSSLDG00000002946	-	98	66.429	ENSJJAG00000000326	-	100	66.429	Jaculus_jaculus
ENSSLDG00000002946	-	100	90.909	ENSKMAG00000016615	nxt2	100	90.909	Kryptolebias_marmoratus
ENSSLDG00000002946	-	97	95.652	ENSLBEG00000014298	nxt2	97	95.652	Labrus_bergylta
ENSSLDG00000002946	-	98	77.143	ENSLACG00000004286	NXT2	98	77.143	Latimeria_chalumnae
ENSSLDG00000002946	-	99	87.234	ENSLOCG00000014519	nxt2	99	87.234	Lepisosteus_oculatus
ENSSLDG00000002946	-	99	73.050	ENSLAFG00000007116	NXT2	84	73.050	Loxodonta_africana
ENSSLDG00000002946	-	100	73.427	ENSMFAG00000004105	NXT2	72	73.427	Macaca_fascicularis
ENSSLDG00000002946	-	100	74.126	ENSMMUG00000013204	NXT2	99	74.126	Macaca_mulatta
ENSSLDG00000002946	-	100	73.427	ENSMNEG00000010392	NXT2	99	77.391	Macaca_nemestrina
ENSSLDG00000002946	-	100	74.126	ENSMLEG00000041108	NXT2	72	74.126	Mandrillus_leucophaeus
ENSSLDG00000002946	-	97	94.928	ENSMAMG00000013603	nxt2	89	94.928	Mastacembelus_armatus
ENSSLDG00000002946	-	100	91.608	ENSMZEG00005007590	nxt2	100	91.608	Maylandia_zebra
ENSSLDG00000002946	-	98	77.857	ENSMGAG00000006597	NXT2	99	77.857	Meleagris_gallopavo
ENSSLDG00000002946	-	100	67.832	ENSMAUG00000000496	Nxt2	99	67.832	Mesocricetus_auratus
ENSSLDG00000002946	-	97	73.188	ENSMICG00000017900	-	96	73.188	Microcebus_murinus
ENSSLDG00000002946	-	99	73.050	ENSMICG00000014511	-	70	73.050	Microcebus_murinus
ENSSLDG00000002946	-	99	62.411	ENSMICG00000014848	-	89	61.972	Microcebus_murinus
ENSSLDG00000002946	-	99	68.085	ENSMOCG00000007176	Nxt2	98	68.085	Microtus_ochrogaster
ENSSLDG00000002946	-	98	86.525	ENSMMOG00000009472	nxt2	99	86.525	Mola_mola
ENSSLDG00000002946	-	100	67.832	ENSMODG00000011492	-	99	67.832	Monodelphis_domestica
ENSSLDG00000002946	-	97	72.662	ENSMODG00000021343	-	100	72.662	Monodelphis_domestica
ENSSLDG00000002946	-	100	93.706	ENSMALG00000006390	nxt2	100	93.706	Monopterus_albus
ENSSLDG00000002946	-	99	70.213	MGP_CAROLIEiJ_G0033463	Nxt2	97	74.336	Mus_caroli
ENSSLDG00000002946	-	99	70.213	ENSMUSG00000042271	Nxt2	97	74.336	Mus_musculus
ENSSLDG00000002946	-	99	70.922	MGP_PahariEiJ_G0032003	Nxt2	97	74.336	Mus_pahari
ENSSLDG00000002946	-	99	70.213	MGP_SPRETEiJ_G0034634	Nxt2	97	74.336	Mus_spretus
ENSSLDG00000002946	-	99	73.759	ENSMPUG00000003973	NXT2	70	73.759	Mustela_putorius_furo
ENSSLDG00000002946	-	99	73.759	ENSMLUG00000000631	NXT2	71	73.759	Myotis_lucifugus
ENSSLDG00000002946	-	99	72.340	ENSNGAG00000015935	Nxt2	98	72.340	Nannospalax_galili
ENSSLDG00000002946	-	100	92.308	ENSNBRG00000019401	nxt2	100	92.308	Neolamprologus_brichardi
ENSSLDG00000002946	-	100	74.126	ENSNLEG00000014331	NXT2	99	74.126	Nomascus_leucogenys
ENSSLDG00000002946	-	97	73.188	ENSMEUG00000000393	-	100	73.188	Notamacropus_eugenii
ENSSLDG00000002946	-	98	74.286	ENSMEUG00000001278	-	99	74.286	Notamacropus_eugenii
ENSSLDG00000002946	-	100	69.930	ENSODEG00000012049	NXT2	99	70.922	Octodon_degus
ENSSLDG00000002946	-	100	92.308	ENSONIG00000017566	nxt2	100	92.308	Oreochromis_niloticus
ENSSLDG00000002946	-	99	75.177	ENSOANG00000011441	NXT2	92	75.177	Ornithorhynchus_anatinus
ENSSLDG00000002946	-	99	73.759	ENSOCUG00000008261	NXT2	71	73.759	Oryctolagus_cuniculus
ENSSLDG00000002946	-	100	90.210	ENSORLG00000022600	nxt2	100	90.210	Oryzias_latipes
ENSSLDG00000002946	-	100	90.210	ENSORLG00020004703	nxt2	100	90.210	Oryzias_latipes_hni
ENSSLDG00000002946	-	100	90.210	ENSORLG00015008149	nxt2	100	90.210	Oryzias_latipes_hsok
ENSSLDG00000002946	-	100	91.608	ENSOMEG00000013420	nxt2	100	91.608	Oryzias_melastigma
ENSSLDG00000002946	-	99	73.759	ENSOGAG00000007890	-	69	73.759	Otolemur_garnettii
ENSSLDG00000002946	-	99	71.631	ENSOARG00000015625	-	86	71.631	Ovis_aries
ENSSLDG00000002946	-	99	70.922	ENSOARG00000018009	-	71	70.922	Ovis_aries
ENSSLDG00000002946	-	99	71.631	ENSOARG00000018574	-	86	71.631	Ovis_aries
ENSSLDG00000002946	-	100	74.825	ENSPPAG00000030159	NXT2	96	77.536	Pan_paniscus
ENSSLDG00000002946	-	99	73.050	ENSPPRG00000024610	NXT2	98	73.050	Panthera_pardus
ENSSLDG00000002946	-	96	68.276	ENSPTIG00000013174	NXT2	98	68.276	Panthera_tigris_altaica
ENSSLDG00000002946	-	100	74.825	ENSPTRG00000039310	NXT2	96	77.536	Pan_troglodytes
ENSSLDG00000002946	-	100	74.126	ENSPANG00000018449	NXT2	99	74.126	Papio_anubis
ENSSLDG00000002946	-	99	89.362	ENSPKIG00000022011	nxt2	99	89.362	Paramormyrops_kingsleyae
ENSSLDG00000002946	-	99	75.177	ENSPSIG00000006737	NXT2	72	75.177	Pelodiscus_sinensis
ENSSLDG00000002946	-	100	89.510	ENSPMGG00000000629	nxt2	100	89.510	Periophthalmus_magnuspinnatus
ENSSLDG00000002946	-	97	73.381	ENSPCIG00000008562	-	89	73.381	Phascolarctos_cinereus
ENSSLDG00000002946	-	100	90.909	ENSPFOG00000007462	nxt2	100	90.909	Poecilia_formosa
ENSSLDG00000002946	-	100	90.909	ENSPLAG00000002080	nxt2	100	90.909	Poecilia_latipinna
ENSSLDG00000002946	-	100	90.909	ENSPMEG00000008382	nxt2	99	93.478	Poecilia_mexicana
ENSSLDG00000002946	-	100	72.727	ENSPPYG00000020625	-	99	72.727	Pongo_abelii
ENSSLDG00000002946	-	99	67.376	ENSPCAG00000008006	NXT2	71	67.376	Procavia_capensis
ENSSLDG00000002946	-	99	71.631	ENSPCOG00000024004	NXT2	98	71.631	Propithecus_coquereli
ENSSLDG00000002946	-	99	72.340	ENSPVAG00000006149	NXT2	73	72.340	Pteropus_vampyrus
ENSSLDG00000002946	-	100	91.608	ENSPNYG00000024009	nxt2	100	91.608	Pundamilia_nyererei
ENSSLDG00000002946	-	100	90.210	ENSPNAG00000025785	nxt2	100	90.210	Pygocentrus_nattereri
ENSSLDG00000002946	-	99	70.213	ENSRNOG00000019168	Nxt2	81	70.213	Rattus_norvegicus
ENSSLDG00000002946	-	100	73.427	ENSRROG00000036216	NXT2	99	73.427	Rhinopithecus_roxellana
ENSSLDG00000002946	-	99	73.759	ENSSBOG00000029386	NXT2	95	76.471	Saimiri_boliviensis_boliviensis
ENSSLDG00000002946	-	97	74.638	ENSSHAG00000002955	-	95	74.638	Sarcophilus_harrisii
ENSSLDG00000002946	-	99	73.759	ENSSHAG00000010539	-	98	73.759	Sarcophilus_harrisii
ENSSLDG00000002946	-	54	67.532	ENSSHAG00000001265	-	86	67.532	Sarcophilus_harrisii
ENSSLDG00000002946	-	99	89.362	ENSSFOG00015009870	nxt2	99	89.362	Scleropages_formosus
ENSSLDG00000002946	-	100	93.706	ENSSMAG00000010366	nxt2	100	93.706	Scophthalmus_maximus
ENSSLDG00000002946	-	100	97.203	ENSSDUG00000011075	nxt2	70	97.203	Seriola_dumerili
ENSSLDG00000002946	-	99	71.631	ENSSARG00000009307	NXT2	71	71.631	Sorex_araneus
ENSSLDG00000002946	-	98	75.000	ENSSPUG00000000372	NXT2	98	75.000	Sphenodon_punctatus
ENSSLDG00000002946	-	100	93.007	ENSSPAG00000015263	nxt2	100	93.007	Stegastes_partitus
ENSSLDG00000002946	-	99	73.759	ENSSSCG00000012581	NXT2	98	73.759	Sus_scrofa
ENSSLDG00000002946	-	95	78.676	ENSTGUG00000004286	NXT2	94	78.676	Taeniopygia_guttata
ENSSLDG00000002946	-	97	93.525	ENSTRUG00000004111	nxt2	99	93.525	Takifugu_rubripes
ENSSLDG00000002946	-	97	92.086	ENSTNIG00000015787	nxt2	100	92.086	Tetraodon_nigroviridis
ENSSLDG00000002946	-	76	76.852	ENSTBEG00000007431	-	53	76.852	Tupaia_belangeri
ENSSLDG00000002946	-	71	67.647	ENSTBEG00000006311	-	99	67.647	Tupaia_belangeri
ENSSLDG00000002946	-	71	68.627	ENSTBEG00000003562	-	99	68.627	Tupaia_belangeri
ENSSLDG00000002946	-	100	67.832	ENSTTRG00000005115	NXT2	72	67.832	Tursiops_truncatus
ENSSLDG00000002946	-	97	76.259	ENSUAMG00000027383	NXT2	99	77.391	Ursus_americanus
ENSSLDG00000002946	-	97	76.259	ENSUMAG00000023095	NXT2	99	77.391	Ursus_maritimus
ENSSLDG00000002946	-	99	74.468	ENSVPAG00000007314	NXT2	70	74.468	Vicugna_pacos
ENSSLDG00000002946	-	99	73.050	ENSVVUG00000010575	NXT2	96	75.735	Vulpes_vulpes
ENSSLDG00000002946	-	95	71.324	ENSXETG00000008528	nxt2	96	71.324	Xenopus_tropicalis
ENSSLDG00000002946	-	97	93.478	ENSXCOG00000011172	nxt2	99	93.478	Xiphophorus_couchianus
ENSSLDG00000002946	-	100	90.909	ENSXMAG00000022277	nxt2	100	90.909	Xiphophorus_maculatus