EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000003038 (Gene tree)
Gene ID: -
Gene Symbol: rrp12
Alias: im:7142677|im:7149218|zgc:111822
Full Name: ribosomal RNA processing 12 homolog
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 9587 bases
Position: chrPEQF01098870.1:420026-429612
Accession: 111657303
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000003978	NUC173	PF08161.12	1.2e-72	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000004113	-	3945	XM_023409419	ENSSLDP00000003978	1287 (aa)	XP_023265187	UPI000C6F5691

Gene Model

Click here to download ENSSLDG00000003038's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000003038's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000003038	rrp12	92	74.342	ENSG00000052749	RRP12	100	75.568	Homo_sapiens
ENSSLDG00000003038	rrp12	99	88.016	ENSAPOG00000013355	rrp12	99	88.016	Acanthochromis_polyacanthus
ENSSLDG00000003038	rrp12	99	62.490	ENSAMEG00000000134	RRP12	99	62.848	Ailuropoda_melanoleuca
ENSSLDG00000003038	rrp12	99	90.547	ENSACIG00000022673	rrp12	99	90.312	Amphilophus_citrinellus
ENSSLDG00000003038	rrp12	99	91.328	ENSAOCG00000016149	rrp12	99	91.328	Amphiprion_ocellaris
ENSSLDG00000003038	rrp12	99	89.408	ENSAPEG00000016023	rrp12	99	89.408	Amphiprion_percula
ENSSLDG00000003038	rrp12	99	91.030	ENSATEG00000022627	rrp12	99	91.030	Anabas_testudineus
ENSSLDG00000003038	rrp12	97	59.236	ENSAPLG00000014387	RRP12	99	59.904	Anas_platyrhynchos
ENSSLDG00000003038	rrp12	99	60.370	ENSACAG00000002175	RRP12	99	60.047	Anolis_carolinensis
ENSSLDG00000003038	rrp12	92	74.342	ENSANAG00000037485	RRP12	99	74.342	Aotus_nancymaae
ENSSLDG00000003038	rrp12	99	90.078	ENSACLG00000007354	rrp12	99	90.078	Astatotilapia_calliptera
ENSSLDG00000003038	rrp12	99	76.106	ENSAMXG00000012852	rrp12	99	76.190	Astyanax_mexicanus
ENSSLDG00000003038	rrp12	99	62.164	ENSBTAG00000002191	RRP12	99	62.413	Bos_taurus
ENSSLDG00000003038	rrp12	85	60.000	ENSCJAG00000016549	-	99	60.329	Callithrix_jacchus
ENSSLDG00000003038	rrp12	99	62.117	ENSCAFG00000009043	RRP12	99	62.548	Canis_familiaris
ENSSLDG00000003038	rrp12	99	62.117	ENSCAFG00020005991	RRP12	99	62.548	Canis_lupus_dingo
ENSSLDG00000003038	rrp12	99	60.168	ENSCHIG00000011876	RRP12	99	60.231	Capra_hircus
ENSSLDG00000003038	rrp12	53	54.376	ENSTSYG00000030210	-	98	55.282	Carlito_syrichta
ENSSLDG00000003038	rrp12	97	56.230	ENSCAPG00000008991	RRP12	97	56.557	Cavia_aperea
ENSSLDG00000003038	rrp12	100	61.758	ENSCPOG00000004215	RRP12	99	62.189	Cavia_porcellus
ENSSLDG00000003038	rrp12	70	57.456	ENSCCAG00000033123	-	82	57.663	Cebus_capucinus
ENSSLDG00000003038	rrp12	79	65.481	ENSCCAG00000024088	RRP12	98	67.176	Cebus_capucinus
ENSSLDG00000003038	rrp12	99	58.417	ENSCATG00000045310	RRP12	99	59.165	Cercocebus_atys
ENSSLDG00000003038	rrp12	100	61.017	ENSCLAG00000003753	RRP12	99	61.443	Chinchilla_lanigera
ENSSLDG00000003038	rrp12	88	60.313	ENSCSAG00000005877	RRP12	99	61.174	Chlorocebus_sabaeus
ENSSLDG00000003038	rrp12	59	69.934	ENSCHOG00000003095	-	60	69.934	Choloepus_hoffmanni
ENSSLDG00000003038	rrp12	94	64.498	ENSCPBG00000011935	RRP12	97	64.677	Chrysemys_picta_bellii
ENSSLDG00000003038	rrp12	63	39.620	ENSCSAVG00000006059	-	99	39.568	Ciona_savignyi
ENSSLDG00000003038	rrp12	92	75.000	ENSCANG00000031653	RRP12	99	62.926	Colobus_angolensis_palliatus
ENSSLDG00000003038	rrp12	90	63.023	ENSCGRG00001004338	Rrp12	99	63.176	Cricetulus_griseus_chok1gshd
ENSSLDG00000003038	rrp12	99	62.519	ENSCGRG00000011965	Rrp12	99	62.655	Cricetulus_griseus_crigri
ENSSLDG00000003038	rrp12	99	87.956	ENSCSEG00000007799	rrp12	99	88.194	Cynoglossus_semilaevis
ENSSLDG00000003038	rrp12	99	87.344	ENSCVAG00000003418	rrp12	99	87.422	Cyprinodon_variegatus
ENSSLDG00000003038	rrp12	99	73.256	ENSDARG00000022410	rrp12	99	73.380	Danio_rerio
ENSSLDG00000003038	rrp12	99	62.173	ENSDNOG00000005120	RRP12	99	62.384	Dasypus_novemcinctus
ENSSLDG00000003038	rrp12	99	61.733	ENSDORG00000009199	Rrp12	99	62.539	Dipodomys_ordii
ENSSLDG00000003038	rrp12	93	58.889	ENSETEG00000002455	RRP12	93	58.889	Echinops_telfairi
ENSSLDG00000003038	rrp12	87	53.165	ENSEBUG00000006555	rrp12	99	61.194	Eptatretus_burgeri
ENSSLDG00000003038	rrp12	99	62.077	ENSEASG00005008693	RRP12	99	62.636	Equus_asinus_asinus
ENSSLDG00000003038	rrp12	94	61.948	ENSECAG00000010892	RRP12	99	62.624	Equus_caballus
ENSSLDG00000003038	rrp12	64	56.765	ENSEEUG00000005447	-	64	56.765	Erinaceus_europaeus
ENSSLDG00000003038	rrp12	99	79.086	ENSELUG00000010510	rrp12	100	78.934	Esox_lucius
ENSSLDG00000003038	rrp12	92	74.342	ENSFCAG00000028639	RRP12	99	74.342	Felis_catus
ENSSLDG00000003038	rrp12	94	62.469	ENSFALG00000008458	RRP12	99	62.905	Ficedula_albicollis
ENSSLDG00000003038	rrp12	99	61.449	ENSFDAG00000019108	RRP12	95	61.753	Fukomys_damarensis
ENSSLDG00000003038	rrp12	99	79.485	ENSFHEG00000004148	rrp12	99	79.485	Fundulus_heteroclitus
ENSSLDG00000003038	rrp12	99	71.771	ENSGMOG00000004188	rrp12	99	72.352	Gadus_morhua
ENSSLDG00000003038	rrp12	99	63.186	ENSGALG00000041331	RRP12	96	64.055	Gallus_gallus
ENSSLDG00000003038	rrp12	99	87.031	ENSGAFG00000009038	rrp12	99	87.031	Gambusia_affinis
ENSSLDG00000003038	rrp12	99	86.797	ENSGACG00000007175	rrp12	99	86.797	Gasterosteus_aculeatus
ENSSLDG00000003038	rrp12	67	66.667	ENSGAGG00000019169	RRP12	96	66.862	Gopherus_agassizii
ENSSLDG00000003038	rrp12	92	74.342	ENSGGOG00000014850	RRP12	99	62.954	Gorilla_gorilla
ENSSLDG00000003038	rrp12	99	90.078	ENSHBUG00000023527	rrp12	99	90.078	Haplochromis_burtoni
ENSSLDG00000003038	rrp12	99	61.681	ENSHGLG00000016772	RRP12	99	61.753	Heterocephalus_glaber_female
ENSSLDG00000003038	rrp12	99	61.681	ENSHGLG00100015110	RRP12	99	61.753	Heterocephalus_glaber_male
ENSSLDG00000003038	rrp12	100	83.320	ENSHCOG00000019519	rrp12	99	83.659	Hippocampus_comes
ENSSLDG00000003038	rrp12	100	75.678	ENSIPUG00000000311	RRP12	99	75.838	Ictalurus_punctatus
ENSSLDG00000003038	rrp12	99	62.683	ENSSTOG00000006515	RRP12	99	63.121	Ictidomys_tridecemlineatus
ENSSLDG00000003038	rrp12	96	61.680	ENSJJAG00000000110	Rrp12	98	61.886	Jaculus_jaculus
ENSSLDG00000003038	rrp12	99	88.489	ENSKMAG00000020621	rrp12	99	88.489	Kryptolebias_marmoratus
ENSSLDG00000003038	rrp12	99	84.627	ENSLBEG00000015335	rrp12	99	84.766	Labrus_bergylta
ENSSLDG00000003038	rrp12	72	63.670	ENSLACG00000016633	RRP12	81	63.670	Latimeria_chalumnae
ENSSLDG00000003038	rrp12	100	71.384	ENSLOCG00000003846	rrp12	99	71.395	Lepisosteus_oculatus
ENSSLDG00000003038	rrp12	99	62.164	ENSLAFG00000015965	RRP12	99	62.394	Loxodonta_africana
ENSSLDG00000003038	rrp12	92	74.342	ENSMFAG00000041558	RRP12	99	63.080	Macaca_fascicularis
ENSSLDG00000003038	rrp12	92	74.342	ENSMMUG00000019634	RRP12	99	63.080	Macaca_mulatta
ENSSLDG00000003038	rrp12	92	74.342	ENSMNEG00000036759	RRP12	99	74.342	Macaca_nemestrina
ENSSLDG00000003038	rrp12	92	75.000	ENSMLEG00000041317	RRP12	99	60.231	Mandrillus_leucophaeus
ENSSLDG00000003038	rrp12	99	88.428	ENSMAMG00000002964	rrp12	99	91.507	Mastacembelus_armatus
ENSSLDG00000003038	rrp12	99	90.000	ENSMZEG00005003241	rrp12	99	90.000	Maylandia_zebra
ENSSLDG00000003038	rrp12	99	61.077	ENSMGAG00000009829	RRP12	99	61.473	Meleagris_gallopavo
ENSSLDG00000003038	rrp12	99	60.046	ENSMAUG00000020743	Rrp12	99	60.015	Mesocricetus_auratus
ENSSLDG00000003038	rrp12	92	76.471	ENSMICG00000007624	RRP12	99	63.235	Microcebus_murinus
ENSSLDG00000003038	rrp12	100	62.433	ENSMOCG00000006753	Rrp12	99	62.452	Microtus_ochrogaster
ENSSLDG00000003038	rrp12	100	86.512	ENSMMOG00000010708	rrp12	99	86.797	Mola_mola
ENSSLDG00000003038	rrp12	99	63.158	ENSMODG00000004315	RRP12	99	63.346	Monodelphis_domestica
ENSSLDG00000003038	rrp12	99	83.333	ENSMALG00000016560	rrp12	99	89.746	Monopterus_albus
ENSSLDG00000003038	rrp12	99	62.366	MGP_CAROLIEiJ_G0022957	Rrp12	99	62.481	Mus_caroli
ENSSLDG00000003038	rrp12	99	62.789	ENSMUSG00000035049	Rrp12	99	62.791	Mus_musculus
ENSSLDG00000003038	rrp12	100	62.895	MGP_PahariEiJ_G0014447	Rrp12	99	63.023	Mus_pahari
ENSSLDG00000003038	rrp12	99	62.943	MGP_SPRETEiJ_G0023878	Rrp12	99	63.023	Mus_spretus
ENSSLDG00000003038	rrp12	99	61.923	ENSMPUG00000017046	RRP12	99	62.277	Mustela_putorius_furo
ENSSLDG00000003038	rrp12	99	62.270	ENSMLUG00000017160	RRP12	99	62.674	Myotis_lucifugus
ENSSLDG00000003038	rrp12	99	62.279	ENSNGAG00000024144	Rrp12	99	62.326	Nannospalax_galili
ENSSLDG00000003038	rrp12	99	88.047	ENSNBRG00000009987	rrp12	99	88.047	Neolamprologus_brichardi
ENSSLDG00000003038	rrp12	99	54.873	ENSNLEG00000013762	RRP12	99	55.178	Nomascus_leucogenys
ENSSLDG00000003038	rrp12	100	58.372	ENSMEUG00000003185	RRP12	99	58.833	Notamacropus_eugenii
ENSSLDG00000003038	rrp12	94	65.890	ENSOPRG00000005001	RRP12	93	65.890	Ochotona_princeps
ENSSLDG00000003038	rrp12	100	61.270	ENSODEG00000016439	RRP12	99	61.671	Octodon_degus
ENSSLDG00000003038	rrp12	99	90.469	ENSONIG00000009528	rrp12	99	90.469	Oreochromis_niloticus
ENSSLDG00000003038	rrp12	100	59.248	ENSOANG00000006560	RRP12	99	59.165	Ornithorhynchus_anatinus
ENSSLDG00000003038	rrp12	99	62.173	ENSOCUG00000005662	RRP12	99	62.578	Oryctolagus_cuniculus
ENSSLDG00000003038	rrp12	99	86.328	ENSORLG00000008688	rrp12	99	86.356	Oryzias_latipes
ENSSLDG00000003038	rrp12	97	86.476	ENSORLG00020002355	rrp12	99	86.396	Oryzias_latipes_hni
ENSSLDG00000003038	rrp12	99	86.562	ENSORLG00015006709	rrp12	99	86.484	Oryzias_latipes_hsok
ENSSLDG00000003038	rrp12	97	86.953	ENSOMEG00000002609	rrp12	99	86.874	Oryzias_melastigma
ENSSLDG00000003038	rrp12	99	61.781	ENSOGAG00000001626	RRP12	99	62.143	Otolemur_garnettii
ENSSLDG00000003038	rrp12	99	61.426	ENSOARG00000009681	RRP12	99	61.669	Ovis_aries
ENSSLDG00000003038	rrp12	92	74.342	ENSPPAG00000043885	RRP12	99	60.944	Pan_paniscus
ENSSLDG00000003038	rrp12	92	73.684	ENSPPRG00000002029	RRP12	99	73.684	Panthera_pardus
ENSSLDG00000003038	rrp12	92	74.342	ENSPTIG00000004428	RRP12	99	74.342	Panthera_tigris_altaica
ENSSLDG00000003038	rrp12	92	74.342	ENSPTRG00000002806	RRP12	99	61.021	Pan_troglodytes
ENSSLDG00000003038	rrp12	92	75.000	ENSPANG00000021360	RRP12	99	63.235	Papio_anubis
ENSSLDG00000003038	rrp12	100	74.345	ENSPKIG00000016516	rrp12	99	74.709	Paramormyrops_kingsleyae
ENSSLDG00000003038	rrp12	99	83.528	ENSPMGG00000020217	rrp12	99	83.853	Periophthalmus_magnuspinnatus
ENSSLDG00000003038	rrp12	100	63.000	ENSPEMG00000008437	Rrp12	99	63.101	Peromyscus_maniculatus_bairdii
ENSSLDG00000003038	rrp12	89	52.122	ENSPMAG00000007493	rrp12	99	46.728	Petromyzon_marinus
ENSSLDG00000003038	rrp12	96	72.148	ENSPCIG00000002157	RRP12	99	63.785	Phascolarctos_cinereus
ENSSLDG00000003038	rrp12	99	87.198	ENSPFOG00000014975	rrp12	99	87.198	Poecilia_formosa
ENSSLDG00000003038	rrp12	99	87.041	ENSPLAG00000009840	rrp12	99	87.041	Poecilia_latipinna
ENSSLDG00000003038	rrp12	99	87.198	ENSPMEG00000021871	rrp12	99	87.198	Poecilia_mexicana
ENSSLDG00000003038	rrp12	99	83.694	ENSPREG00000020950	rrp12	99	83.981	Poecilia_reticulata
ENSSLDG00000003038	rrp12	99	61.982	ENSPPYG00000002528	RRP12	99	62.258	Pongo_abelii
ENSSLDG00000003038	rrp12	94	75.706	ENSPCAG00000008967	RRP12	94	75.706	Procavia_capensis
ENSSLDG00000003038	rrp12	92	75.658	ENSPCOG00000014009	RRP12	99	63.636	Propithecus_coquereli
ENSSLDG00000003038	rrp12	99	59.846	ENSPVAG00000003370	RRP12	99	60.031	Pteropus_vampyrus
ENSSLDG00000003038	rrp12	99	90.391	ENSPNYG00000009451	rrp12	99	90.391	Pundamilia_nyererei
ENSSLDG00000003038	rrp12	100	75.581	ENSPNAG00000007658	rrp12	99	75.547	Pygocentrus_nattereri
ENSSLDG00000003038	rrp12	99	62.866	ENSRNOG00000048495	Rrp12	99	62.995	Rattus_norvegicus
ENSSLDG00000003038	rrp12	92	75.000	ENSRBIG00000021296	RRP12	99	75.000	Rhinopithecus_bieti
ENSSLDG00000003038	rrp12	92	75.000	ENSRROG00000032482	RRP12	99	75.000	Rhinopithecus_roxellana
ENSSLDG00000003038	rrp12	92	73.684	ENSSBOG00000030992	RRP12	99	73.684	Saimiri_boliviensis_boliviensis
ENSSLDG00000003038	rrp12	99	63.264	ENSSHAG00000018275	RRP12	99	63.268	Sarcophilus_harrisii
ENSSLDG00000003038	rrp12	99	76.398	ENSSFOG00015016400	rrp12	99	76.719	Scleropages_formosus
ENSSLDG00000003038	rrp12	99	91.934	ENSSMAG00000004047	rrp12	99	91.934	Scophthalmus_maximus
ENSSLDG00000003038	rrp12	100	99.456	ENSSDUG00000022871	rrp12	100	99.456	Seriola_dumerili
ENSSLDG00000003038	rrp12	100	61.586	ENSSPUG00000012221	RRP12	99	62.064	Sphenodon_punctatus
ENSSLDG00000003038	rrp12	99	91.719	ENSSPAG00000002261	rrp12	99	91.719	Stegastes_partitus
ENSSLDG00000003038	rrp12	100	61.586	ENSSSCG00000010514	RRP12	99	61.986	Sus_scrofa
ENSSLDG00000003038	rrp12	89	59.652	ENSTGUG00000009711	RRP12	99	60.070	Taeniopygia_guttata
ENSSLDG00000003038	rrp12	100	81.197	ENSTRUG00000012017	rrp12	99	81.206	Takifugu_rubripes
ENSSLDG00000003038	rrp12	100	85.936	ENSTNIG00000016522	rrp12	99	86.139	Tetraodon_nigroviridis
ENSSLDG00000003038	rrp12	77	72.772	ENSTBEG00000004907	RRP12	79	72.772	Tupaia_belangeri
ENSSLDG00000003038	rrp12	100	59.969	ENSTTRG00000009878	RRP12	99	60.326	Tursiops_truncatus
ENSSLDG00000003038	rrp12	99	62.471	ENSUAMG00000009092	RRP12	99	62.828	Ursus_americanus
ENSSLDG00000003038	rrp12	99	60.866	ENSUMAG00000021621	RRP12	99	61.198	Ursus_maritimus
ENSSLDG00000003038	rrp12	99	62.229	ENSVVUG00000023168	RRP12	99	62.461	Vulpes_vulpes
ENSSLDG00000003038	rrp12	99	65.224	ENSXETG00000003430	rrp12	99	65.397	Xenopus_tropicalis
ENSSLDG00000003038	rrp12	90	86.328	ENSXCOG00000012082	rrp12	97	86.068	Xiphophorus_couchianus
ENSSLDG00000003038	rrp12	99	87.031	ENSXMAG00000013498	rrp12	99	86.953	Xiphophorus_maculatus