EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000003091 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 654 bases
Position: chrPEQF01019779.1:5-658
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000003930	MRP-S35	PF10246.9	3.5e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000004061	-	399	-	ENSSLDP00000003930	132 (aa)	-	-

Gene Model

Click here to download ENSSLDG00000003091's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000003091's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000003091	-	98	96.124	ENSSLDG00000013261	mrps28	68	96.124

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000003091	-	62	54.217	ENSG00000147586	MRPS28	51	65.217	Homo_sapiens
ENSSLDG00000003091	-	98	62.016	ENSACIG00000007839	mrps28	67	59.690	Amphilophus_citrinellus
ENSSLDG00000003091	-	98	60.465	ENSAOCG00000000705	mrps28	66	60.465	Amphiprion_ocellaris
ENSSLDG00000003091	-	98	56.589	ENSAPEG00000016051	mrps28	66	60.465	Amphiprion_percula
ENSSLDG00000003091	-	98	67.442	ENSATEG00000015295	mrps28	69	67.442	Anabas_testudineus
ENSSLDG00000003091	-	86	53.509	ENSAMXG00000026324	mrps28	56	48.673	Astyanax_mexicanus
ENSSLDG00000003091	-	62	56.098	ENSCAFG00000008393	MRPS28	69	41.667	Canis_familiaris
ENSSLDG00000003091	-	62	56.098	ENSCAFG00020017987	MRPS28	69	41.667	Canis_lupus_dingo
ENSSLDG00000003091	-	75	51.000	ENSTSYG00000013531	-	60	52.874	Carlito_syrichta
ENSSLDG00000003091	-	77	51.456	ENSECAG00000030797	-	50	53.933	Equus_caballus
ENSSLDG00000003091	-	93	47.656	ENSELUG00000023151	mrps28	92	44.776	Esox_lucius
ENSSLDG00000003091	-	67	53.846	ENSFCAG00000032510	MRPS28	67	43.182	Felis_catus
ENSSLDG00000003091	-	56	56.757	ENSFALG00000008608	MRPS28	68	51.064	Ficedula_albicollis
ENSSLDG00000003091	-	93	47.200	ENSHCOG00000011561	mrps28	65	47.581	Hippocampus_comes
ENSSLDG00000003091	-	98	51.111	ENSIPUG00000012566	mrps28	69	49.630	Ictalurus_punctatus
ENSSLDG00000003091	-	62	56.098	ENSSTOG00000015179	MRPS28	63	51.648	Ictidomys_tridecemlineatus
ENSSLDG00000003091	-	98	59.690	ENSNBRG00000021393	mrps28	67	57.364	Neolamprologus_brichardi
ENSSLDG00000003091	-	98	45.113	ENSMEUG00000007676	MRPS28	68	41.667	Notamacropus_eugenii
ENSSLDG00000003091	-	70	64.130	ENSONIG00000020758	mrps28	67	58.140	Oreochromis_niloticus
ENSSLDG00000003091	-	98	58.015	ENSORLG00020022089	mrps28	67	54.198	Oryzias_latipes_hni
ENSSLDG00000003091	-	67	55.056	ENSOGAG00000016599	MRPS28	66	43.609	Otolemur_garnettii
ENSSLDG00000003091	-	67	53.846	ENSPPRG00000009220	MRPS28	67	43.182	Panthera_pardus
ENSSLDG00000003091	-	67	53.846	ENSPTIG00000019934	MRPS28	67	43.182	Panthera_tigris_altaica
ENSSLDG00000003091	-	98	46.617	ENSPCIG00000026795	MRPS28	66	43.939	Phascolarctos_cinereus
ENSSLDG00000003091	-	98	47.287	ENSPFOG00000020828	mrps28	64	46.512	Poecilia_formosa
ENSSLDG00000003091	-	98	47.287	ENSPLAG00000005387	mrps28	64	46.512	Poecilia_latipinna
ENSSLDG00000003091	-	98	48.062	ENSPMEG00000022332	mrps28	50	53.261	Poecilia_mexicana
ENSSLDG00000003091	-	69	73.626	ENSSMAG00000021042	mrps28	51	73.913	Scophthalmus_maximus
ENSSLDG00000003091	-	98	55.814	ENSTRUG00000012758	mrps28	68	56.589	Takifugu_rubripes
ENSSLDG00000003091	-	67	46.067	ENSTBEG00000010380	MRPS28	64	38.346	Tupaia_belangeri
ENSSLDG00000003091	-	98	43.939	ENSVVUG00000000384	MRPS28	69	42.647	Vulpes_vulpes
ENSSLDG00000003091	-	98	46.512	ENSXCOG00000015251	mrps28	60	45.736	Xiphophorus_couchianus