EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000003196 (Gene tree)
Gene ID: -
Gene Symbol: yrdc
Alias: zgc:162301
Full Name: yrdC N6-threonylcarbamoyltransferase domain containing
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 2905 bases
Position: chrPEQF01097923.1:580378-583282
Accession: 111651140
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000004043	Sua5_yciO_yrdC	PF01300.18	4.1e-48	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000004178	-	801	XM_023401098	ENSSLDP00000004043	266 (aa)	XP_023256866	UPI000C6FC3AD

Gene Model

Click here to download ENSSLDG00000003196's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000003196's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000003196	yrdc	98	53.409	ENSG00000196449	YRDC	94	53.409	Homo_sapiens
ENSSLDG00000003196	yrdc	100	86.090	ENSAPOG00000024293	yrdc	99	86.090	Acanthochromis_polyacanthus
ENSSLDG00000003196	yrdc	67	64.481	ENSAMEG00000001173	YRDC	97	64.481	Ailuropoda_melanoleuca
ENSSLDG00000003196	yrdc	100	85.338	ENSACIG00000017330	yrdc	99	85.338	Amphilophus_citrinellus
ENSSLDG00000003196	yrdc	100	86.842	ENSAOCG00000021647	yrdc	99	86.842	Amphiprion_ocellaris
ENSSLDG00000003196	yrdc	100	86.466	ENSAPEG00000006164	yrdc	99	86.466	Amphiprion_percula
ENSSLDG00000003196	yrdc	98	84.674	ENSATEG00000010086	yrdc	98	84.674	Anabas_testudineus
ENSSLDG00000003196	yrdc	71	61.340	ENSACAG00000017203	YRDC	99	58.491	Anolis_carolinensis
ENSSLDG00000003196	yrdc	81	58.904	ENSANAG00000028788	-	93	58.904	Aotus_nancymaae
ENSSLDG00000003196	yrdc	75	58.738	ENSANAG00000031052	-	75	58.738	Aotus_nancymaae
ENSSLDG00000003196	yrdc	100	85.393	ENSACLG00000027775	yrdc	99	85.393	Astatotilapia_calliptera
ENSSLDG00000003196	yrdc	97	70.656	ENSAMXG00000037791	yrdc	92	75.225	Astyanax_mexicanus
ENSSLDG00000003196	yrdc	98	54.545	ENSBTAG00000006510	YRDC	95	54.545	Bos_taurus
ENSSLDG00000003196	yrdc	77	36.697	WBGene00012997	Y48C3A.18	99	36.697	Caenorhabditis_elegans
ENSSLDG00000003196	yrdc	98	52.652	ENSCJAG00000002078	YRDC	72	52.652	Callithrix_jacchus
ENSSLDG00000003196	yrdc	77	61.244	ENSCAFG00000003253	YRDC	77	60.952	Canis_familiaris
ENSSLDG00000003196	yrdc	77	61.905	ENSCAFG00020007843	YRDC	77	61.905	Canis_lupus_dingo
ENSSLDG00000003196	yrdc	77	62.381	ENSCHIG00000007882	YRDC	76	62.381	Capra_hircus
ENSSLDG00000003196	yrdc	62	64.706	ENSTSYG00000005555	YRDC	61	64.706	Carlito_syrichta
ENSSLDG00000003196	yrdc	94	56.693	ENSCPOG00000036144	YRDC	90	56.693	Cavia_porcellus
ENSSLDG00000003196	yrdc	98	52.273	ENSCCAG00000028891	YRDC	81	58.079	Cebus_capucinus
ENSSLDG00000003196	yrdc	98	51.515	ENSCATG00000036928	YRDC	94	52.652	Cercocebus_atys
ENSSLDG00000003196	yrdc	73	65.990	ENSCLAG00000015012	YRDC	83	59.402	Chinchilla_lanigera
ENSSLDG00000003196	yrdc	98	51.515	ENSCSAG00000001116	YRDC	94	52.652	Chlorocebus_sabaeus
ENSSLDG00000003196	yrdc	53	65.000	ENSCHOG00000005500	YRDC	67	65.000	Choloepus_hoffmanni
ENSSLDG00000003196	yrdc	76	65.700	ENSCPBG00000018446	YRDC	90	64.929	Chrysemys_picta_bellii
ENSSLDG00000003196	yrdc	75	49.765	ENSCING00000007564	-	98	48.571	Ciona_intestinalis
ENSSLDG00000003196	yrdc	75	48.341	ENSCSAVG00000009982	-	98	46.411	Ciona_savignyi
ENSSLDG00000003196	yrdc	98	52.273	ENSCANG00000031111	YRDC	94	53.409	Colobus_angolensis_palliatus
ENSSLDG00000003196	yrdc	84	54.386	ENSCGRG00001000829	-	63	53.913	Cricetulus_griseus_chok1gshd
ENSSLDG00000003196	yrdc	84	59.649	ENSCGRG00001014496	-	81	59.389	Cricetulus_griseus_chok1gshd
ENSSLDG00000003196	yrdc	93	69.767	ENSCSEG00000019075	yrdc	95	69.767	Cynoglossus_semilaevis
ENSSLDG00000003196	yrdc	96	76.172	ENSCVAG00000017355	yrdc	96	76.172	Cyprinodon_variegatus
ENSSLDG00000003196	yrdc	88	73.077	ENSDARG00000041428	yrdc	98	73.077	Danio_rerio
ENSSLDG00000003196	yrdc	71	47.423	ENSDNOG00000036198	-	94	47.423	Dasypus_novemcinctus
ENSSLDG00000003196	yrdc	92	55.020	ENSDNOG00000038789	-	90	54.506	Dasypus_novemcinctus
ENSSLDG00000003196	yrdc	72	63.590	ENSDORG00000008788	Yrdc	86	63.590	Dipodomys_ordii
ENSSLDG00000003196	yrdc	75	48.780	FBgn0061361	CG33786	82	48.780	Drosophila_melanogaster
ENSSLDG00000003196	yrdc	86	45.299	ENSETEG00000003442	YRDC	83	45.299	Echinops_telfairi
ENSSLDG00000003196	yrdc	88	49.793	ENSEBUG00000014080	yrdc	99	49.793	Eptatretus_burgeri
ENSSLDG00000003196	yrdc	94	55.686	ENSEASG00005012253	YRDC	75	62.559	Equus_asinus_asinus
ENSSLDG00000003196	yrdc	94	55.294	ENSECAG00000022522	YRDC	75	62.559	Equus_caballus
ENSSLDG00000003196	yrdc	95	73.643	ENSELUG00000018071	yrdc	85	73.643	Esox_lucius
ENSSLDG00000003196	yrdc	86	57.082	ENSFCAG00000011018	YRDC	83	56.838	Felis_catus
ENSSLDG00000003196	yrdc	69	32.143	ENSFALG00000011333	-	51	32.143	Ficedula_albicollis
ENSSLDG00000003196	yrdc	71	67.358	ENSFALG00000000964	YRDC	89	66.837	Ficedula_albicollis
ENSSLDG00000003196	yrdc	97	77.220	ENSFHEG00000001029	yrdc	96	76.987	Fundulus_heteroclitus
ENSSLDG00000003196	yrdc	77	80.488	ENSGMOG00000015635	yrdc	99	80.488	Gadus_morhua
ENSSLDG00000003196	yrdc	95	56.923	ENSGALG00000029001	YRDC	97	56.923	Gallus_gallus
ENSSLDG00000003196	yrdc	73	32.212	ENSGALG00000025899	-	69	31.250	Gallus_gallus
ENSSLDG00000003196	yrdc	99	78.788	ENSGAFG00000008396	yrdc	99	78.788	Gambusia_affinis
ENSSLDG00000003196	yrdc	88	81.857	ENSGACG00000013878	yrdc	98	81.013	Gasterosteus_aculeatus
ENSSLDG00000003196	yrdc	83	62.832	ENSGAGG00000014968	YRDC	98	62.832	Gopherus_agassizii
ENSSLDG00000003196	yrdc	98	53.409	ENSGGOG00000007619	YRDC	94	53.409	Gorilla_gorilla
ENSSLDG00000003196	yrdc	100	85.768	ENSHBUG00000009298	yrdc	99	85.768	Haplochromis_burtoni
ENSSLDG00000003196	yrdc	87	58.723	ENSHGLG00000014075	YRDC	83	58.974	Heterocephalus_glaber_female
ENSSLDG00000003196	yrdc	77	63.462	ENSHGLG00100002734	YRDC	75	63.768	Heterocephalus_glaber_male
ENSSLDG00000003196	yrdc	99	66.160	ENSHCOG00000006598	yrdc	99	66.160	Hippocampus_comes
ENSSLDG00000003196	yrdc	89	77.119	ENSIPUG00000014985	yrdc	98	77.119	Ictalurus_punctatus
ENSSLDG00000003196	yrdc	95	55.985	ENSSTOG00000001643	YRDC	93	55.985	Ictidomys_tridecemlineatus
ENSSLDG00000003196	yrdc	95	82.143	ENSKMAG00000013468	yrdc	94	82.143	Kryptolebias_marmoratus
ENSSLDG00000003196	yrdc	100	85.714	ENSLBEG00000027501	yrdc	99	85.714	Labrus_bergylta
ENSSLDG00000003196	yrdc	76	33.953	ENSLACG00000017624	si:ch211-153b23.3	65	33.953	Latimeria_chalumnae
ENSSLDG00000003196	yrdc	77	68.269	ENSLACG00000010689	YRDC	95	68.116	Latimeria_chalumnae
ENSSLDG00000003196	yrdc	87	69.492	ENSLOCG00000003321	yrdc	97	69.492	Lepisosteus_oculatus
ENSSLDG00000003196	yrdc	75	63.235	ENSLAFG00000017556	YRDC	73	63.235	Loxodonta_africana
ENSSLDG00000003196	yrdc	75	61.275	ENSMFAG00000003487	YRDC	96	62.745	Macaca_fascicularis
ENSSLDG00000003196	yrdc	98	51.515	ENSMMUG00000005372	YRDC	70	52.652	Macaca_mulatta
ENSSLDG00000003196	yrdc	98	51.515	ENSMNEG00000029348	YRDC	94	52.652	Macaca_nemestrina
ENSSLDG00000003196	yrdc	52	62.937	ENSMLEG00000041122	YRDC	87	66.667	Mandrillus_leucophaeus
ENSSLDG00000003196	yrdc	98	84.030	ENSMAMG00000007315	yrdc	98	84.030	Mastacembelus_armatus
ENSSLDG00000003196	yrdc	100	85.393	ENSMZEG00005006948	yrdc	99	85.393	Maylandia_zebra
ENSSLDG00000003196	yrdc	73	32.212	ENSMGAG00000005489	-	55	32.212	Meleagris_gallopavo
ENSSLDG00000003196	yrdc	74	66.832	ENSMGAG00000002833	YRDC	99	66.832	Meleagris_gallopavo
ENSSLDG00000003196	yrdc	86	59.657	ENSMICG00000031688	YRDC	84	59.149	Microcebus_murinus
ENSSLDG00000003196	yrdc	70	52.688	ENSMOCG00000000164	-	64	56.024	Microtus_ochrogaster
ENSSLDG00000003196	yrdc	100	83.083	ENSMMOG00000002119	yrdc	99	83.083	Mola_mola
ENSSLDG00000003196	yrdc	76	63.415	ENSMODG00000017750	YRDC	73	63.415	Monodelphis_domestica
ENSSLDG00000003196	yrdc	98	84.231	ENSMALG00000012471	yrdc	98	84.231	Monopterus_albus
ENSSLDG00000003196	yrdc	79	59.624	MGP_CAROLIEiJ_G0026453	Yrdc	97	68.627	Mus_caroli
ENSSLDG00000003196	yrdc	87	57.872	ENSMUSG00000028889	Yrdc	100	68.571	Mus_musculus
ENSSLDG00000003196	yrdc	87	58.723	MGP_PahariEiJ_G0028784	Yrdc	100	68.571	Mus_pahari
ENSSLDG00000003196	yrdc	87	57.872	MGP_SPRETEiJ_G0027432	Yrdc	83	57.872	Mus_spretus
ENSSLDG00000003196	yrdc	74	62.871	ENSMPUG00000014542	YRDC	81	62.871	Mustela_putorius_furo
ENSSLDG00000003196	yrdc	73	60.406	ENSMLUG00000024310	-	97	60.406	Myotis_lucifugus
ENSSLDG00000003196	yrdc	75	53.922	ENSMLUG00000028796	-	73	53.922	Myotis_lucifugus
ENSSLDG00000003196	yrdc	75	64.216	ENSMLUG00000000955	-	73	64.216	Myotis_lucifugus
ENSSLDG00000003196	yrdc	78	63.033	ENSNGAG00000019099	Yrdc	75	63.033	Nannospalax_galili
ENSSLDG00000003196	yrdc	99	85.338	ENSNBRG00000009475	yrdc	100	85.338	Neolamprologus_brichardi
ENSSLDG00000003196	yrdc	98	53.409	ENSNLEG00000011665	YRDC	94	53.409	Nomascus_leucogenys
ENSSLDG00000003196	yrdc	77	63.033	ENSMEUG00000005068	YRDC	98	63.033	Notamacropus_eugenii
ENSSLDG00000003196	yrdc	94	56.693	ENSODEG00000007401	YRDC	100	68.571	Octodon_degus
ENSSLDG00000003196	yrdc	89	88.186	ENSONIG00000016213	yrdc	99	88.186	Oreochromis_niloticus
ENSSLDG00000003196	yrdc	95	55.253	ENSOCUG00000005384	YRDC	80	58.723	Oryctolagus_cuniculus
ENSSLDG00000003196	yrdc	100	76.952	ENSORLG00000014393	yrdc	99	76.952	Oryzias_latipes
ENSSLDG00000003196	yrdc	100	77.154	ENSORLG00020019663	yrdc	99	77.154	Oryzias_latipes_hni
ENSSLDG00000003196	yrdc	100	76.404	ENSORLG00015004625	yrdc	99	76.404	Oryzias_latipes_hsok
ENSSLDG00000003196	yrdc	100	78.571	ENSOMEG00000018550	yrdc	99	78.571	Oryzias_melastigma
ENSSLDG00000003196	yrdc	92	53.962	ENSOGAG00000030474	YRDC	83	58.952	Otolemur_garnettii
ENSSLDG00000003196	yrdc	77	62.381	ENSOARG00000019873	YRDC	75	62.381	Ovis_aries
ENSSLDG00000003196	yrdc	52	66.667	ENSPPAG00000039722	-	89	68.182	Pan_paniscus
ENSSLDG00000003196	yrdc	86	56.838	ENSPPRG00000007752	YRDC	83	56.838	Panthera_pardus
ENSSLDG00000003196	yrdc	57	60.897	ENSPTIG00000019821	YRDC	59	64.493	Panthera_tigris_altaica
ENSSLDG00000003196	yrdc	98	53.409	ENSPTRG00000000557	YRDC	94	53.409	Pan_troglodytes
ENSSLDG00000003196	yrdc	98	51.515	ENSPANG00000006487	YRDC	71	52.652	Papio_anubis
ENSSLDG00000003196	yrdc	97	69.231	ENSPKIG00000004574	yrdc	94	69.231	Paramormyrops_kingsleyae
ENSSLDG00000003196	yrdc	83	62.054	ENSPSIG00000006483	YRDC	76	62.054	Pelodiscus_sinensis
ENSSLDG00000003196	yrdc	98	74.427	ENSPMGG00000004184	yrdc	95	78.279	Periophthalmus_magnuspinnatus
ENSSLDG00000003196	yrdc	65	62.712	ENSPEMG00000016985	Yrdc	77	62.712	Peromyscus_maniculatus_bairdii
ENSSLDG00000003196	yrdc	65	57.062	ENSPMAG00000002905	yrdc	96	57.062	Petromyzon_marinus
ENSSLDG00000003196	yrdc	76	62.439	ENSPCIG00000025731	YRDC	73	62.439	Phascolarctos_cinereus
ENSSLDG00000003196	yrdc	99	78.409	ENSPFOG00000023097	yrdc	99	78.409	Poecilia_formosa
ENSSLDG00000003196	yrdc	99	78.409	ENSPLAG00000020882	yrdc	99	78.409	Poecilia_latipinna
ENSSLDG00000003196	yrdc	99	78.409	ENSPMEG00000013237	yrdc	99	78.409	Poecilia_mexicana
ENSSLDG00000003196	yrdc	99	78.788	ENSPREG00000005285	yrdc	99	78.788	Poecilia_reticulata
ENSSLDG00000003196	yrdc	84	59.211	ENSPPYG00000001523	-	93	59.471	Pongo_abelii
ENSSLDG00000003196	yrdc	86	58.547	ENSPCAG00000016850	YRDC	83	58.547	Procavia_capensis
ENSSLDG00000003196	yrdc	86	59.402	ENSPCOG00000013214	YRDC	84	59.149	Propithecus_coquereli
ENSSLDG00000003196	yrdc	75	63.725	ENSPVAG00000010147	YRDC	73	63.725	Pteropus_vampyrus
ENSSLDG00000003196	yrdc	100	85.393	ENSPNYG00000013956	yrdc	99	85.393	Pundamilia_nyererei
ENSSLDG00000003196	yrdc	86	72.926	ENSPNAG00000015625	yrdc	95	72.926	Pygocentrus_nattereri
ENSSLDG00000003196	yrdc	86	57.940	ENSRNOG00000025424	Yrdc	83	57.447	Rattus_norvegicus
ENSSLDG00000003196	yrdc	98	52.273	ENSRBIG00000032289	YRDC	94	53.030	Rhinopithecus_bieti
ENSSLDG00000003196	yrdc	82	57.018	ENSRROG00000039370	YRDC	78	58.333	Rhinopithecus_roxellana
ENSSLDG00000003196	yrdc	73	62.944	ENSSBOG00000018937	YRDC	84	62.944	Saimiri_boliviensis_boliviensis
ENSSLDG00000003196	yrdc	53	65.278	ENSSHAG00000013957	-	90	67.669	Sarcophilus_harrisii
ENSSLDG00000003196	yrdc	81	71.233	ENSSFOG00015006128	yrdc	94	71.233	Scleropages_formosus
ENSSLDG00000003196	yrdc	89	88.655	ENSSMAG00000005195	yrdc	100	86.090	Scophthalmus_maximus
ENSSLDG00000003196	yrdc	53	36.667	ENSSDUG00000006736	-	77	36.000	Seriola_dumerili
ENSSLDG00000003196	yrdc	100	99.624	ENSSDUG00000009775	yrdc	100	99.624	Seriola_dumerili
ENSSLDG00000003196	yrdc	76	66.341	ENSSPUG00000003946	YRDC	79	66.341	Sphenodon_punctatus
ENSSLDG00000003196	yrdc	100	83.835	ENSSPAG00000012559	yrdc	99	83.835	Stegastes_partitus
ENSSLDG00000003196	yrdc	92	56.225	ENSSSCG00000040425	YRDC	81	59.389	Sus_scrofa
ENSSLDG00000003196	yrdc	53	68.493	ENSTGUG00000001507	YRDC	93	70.073	Taeniopygia_guttata
ENSSLDG00000003196	yrdc	95	73.152	ENSTRUG00000005923	yrdc	95	73.152	Takifugu_rubripes
ENSSLDG00000003196	yrdc	56	62.987	ENSTBEG00000008863	YRDC	98	62.987	Tupaia_belangeri
ENSSLDG00000003196	yrdc	52	67.376	ENSTTRG00000013538	-	89	68.939	Tursiops_truncatus
ENSSLDG00000003196	yrdc	73	64.322	ENSUAMG00000006150	YRDC	98	64.322	Ursus_americanus
ENSSLDG00000003196	yrdc	75	51.471	ENSVPAG00000006642	YRDC	87	51.471	Vicugna_pacos
ENSSLDG00000003196	yrdc	87	61.826	ENSXETG00000014420	yrdc	99	61.826	Xenopus_tropicalis
ENSSLDG00000003196	yrdc	88	81.702	ENSXCOG00000000829	yrdc	99	81.702	Xiphophorus_couchianus
ENSSLDG00000003196	yrdc	99	78.788	ENSXMAG00000014606	yrdc	94	78.788	Xiphophorus_maculatus