EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSSLDG00000003239 (Gene tree)
Gene ID
-
Gene Symbol
lig4
Alias
zgc:165595
Full Name
DNA ligase 4
Gene Type
protein_coding
Species
Seriola_lalandi_dorsalis
Status
putative
Strand
Plus strand
Length
2896 bases
Position
chrPEQF01099439.1:323247-326142
Accession
111645993
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSLDP00000004080RNA_ligasePF09414.103.5e-1011
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSLDT00000004217-2703XM_023395356ENSSLDP00000004080900 (aa)XP_023251124-
Gene Model
Click here to download ENSSLDG00000003239's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000003239's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSLDG00000003239lig49965.385ENSG00000174405LIG410065.877Homo_sapiens
ENSSLDG00000003239lig410087.856ENSAPOG00000000866lig410087.856Acanthochromis_polyacanthus
ENSSLDG00000003239lig49962.951ENSAMEG00000019685LIG49962.951Ailuropoda_melanoleuca
ENSSLDG00000003239lig49987.623ENSACIG00000018309lig410087.527Amphilophus_citrinellus
ENSSLDG00000003239lig410088.184ENSAOCG00000011768lig410088.184Amphiprion_ocellaris
ENSSLDG00000003239lig410088.293ENSAPEG00000017815lig410088.293Amphiprion_percula
ENSSLDG00000003239lig410088.731ENSATEG00000005583lig410088.512Anabas_testudineus
ENSSLDG00000003239lig49666.023ENSAPLG00000001673LIG49966.023Anas_platyrhynchos
ENSSLDG00000003239lig49965.859ENSACAG00000014566LIG49965.749Anolis_carolinensis
ENSSLDG00000003239lig49964.725ENSANAG00000012446LIG49964.725Aotus_nancymaae
ENSSLDG00000003239lig49986.637ENSACLG00000027051lig410086.543Astatotilapia_calliptera
ENSSLDG00000003239lig410077.283ENSAMXG00000008192lig49577.174Astyanax_mexicanus
ENSSLDG00000003239lig49964.066ENSBTAG00000015868LIG49964.066Bos_taurus
ENSSLDG00000003239lig49964.176ENSCJAG00000014689LIG49964.176Callithrix_jacchus
ENSSLDG00000003239lig49963.846ENSCAFG00000006031LIG49963.846Canis_familiaris
ENSSLDG00000003239lig49963.846ENSCAFG00020021230LIG49963.846Canis_lupus_dingo
ENSSLDG00000003239lig49964.066ENSCHIG00000001019LIG49964.066Capra_hircus
ENSSLDG00000003239lig49963.566ENSCAPG00000006284LIG49963.566Cavia_aperea
ENSSLDG00000003239lig49963.407ENSCPOG00000014266LIG49963.407Cavia_porcellus
ENSSLDG00000003239lig49964.615ENSCCAG00000019971LIG49964.615Cebus_capucinus
ENSSLDG00000003239lig49964.784ENSCATG00000021075LIG49964.784Cercocebus_atys
ENSSLDG00000003239lig49963.987ENSCLAG00000003376LIG49963.987Chinchilla_lanigera
ENSSLDG00000003239lig49964.673ENSCSAG00000000211LIG49964.673Chlorocebus_sabaeus
ENSSLDG00000003239lig49967.220ENSCPBG00000023291LIG410066.594Chrysemys_picta_bellii
ENSSLDG00000003239lig46845.440ENSCING00000009536-9745.440Ciona_intestinalis
ENSSLDG00000003239lig48243.684ENSCSAVG00000010336-9843.684Ciona_savignyi
ENSSLDG00000003239lig49964.563ENSCANG00000005805LIG49964.563Colobus_angolensis_palliatus
ENSSLDG00000003239lig49963.938ENSCGRG00001012072Lig49963.938Cricetulus_griseus_chok1gshd
ENSSLDG00000003239lig49963.938ENSCGRG00000013417Lig49963.938Cricetulus_griseus_crigri
ENSSLDG00000003239lig49785.185ENSCSEG00000013905lig49685.185Cynoglossus_semilaevis
ENSSLDG00000003239lig410086.339ENSCVAG00000007896lig410086.339Cyprinodon_variegatus
ENSSLDG00000003239lig410077.133ENSDARG00000060620lig410077.133Danio_rerio
ENSSLDG00000003239lig49963.557ENSDNOG00000000513LIG49963.557Dasypus_novemcinctus
ENSSLDG00000003239lig49964.895ENSDORG00000027303Lig49964.895Dipodomys_ordii
ENSSLDG00000003239lig49862.417ENSETEG00000015563LIG410062.749Echinops_telfairi
ENSSLDG00000003239lig49843.326ENSEBUG00000014243lig49843.326Eptatretus_burgeri
ENSSLDG00000003239lig49963.626ENSEASG00005022073LIG49963.626Equus_asinus_asinus
ENSSLDG00000003239lig49963.516ENSECAG00000003257LIG49963.516Equus_caballus
ENSSLDG00000003239lig49881.728ENSELUG00000006787lig49981.728Esox_lucius
ENSSLDG00000003239lig49963.677ENSFCAG00000031985LIG49963.677Felis_catus
ENSSLDG00000003239lig48966.790ENSFALG00000004214LIG49668.193Ficedula_albicollis
ENSSLDG00000003239lig49963.077ENSFDAG00000008973LIG49963.077Fukomys_damarensis
ENSSLDG00000003239lig410085.996ENSFHEG00000007398lig49185.996Fundulus_heteroclitus
ENSSLDG00000003239lig48577.150ENSGMOG00000012843lig49977.419Gadus_morhua
ENSSLDG00000003239lig410064.340ENSGALG00000016854LIG410064.301Gallus_gallus
ENSSLDG00000003239lig49985.886ENSGAFG00000019779lig49686.214Gambusia_affinis
ENSSLDG00000003239lig410083.589ENSGACG00000014135lig49983.626Gasterosteus_aculeatus
ENSSLDG00000003239lig49965.165ENSGGOG00000027771LIG49965.165Gorilla_gorilla
ENSSLDG00000003239lig49986.418ENSHBUG00000006245lig410086.324Haplochromis_burtoni
ENSSLDG00000003239lig49963.407ENSHGLG00000000718LIG49963.407Heterocephalus_glaber_female
ENSSLDG00000003239lig49963.407ENSHGLG00100003265LIG49963.407Heterocephalus_glaber_male
ENSSLDG00000003239lig410081.223ENSHCOG00000012010lig410080.895Hippocampus_comes
ENSSLDG00000003239lig410076.696ENSIPUG00000013748lig410076.696Ictalurus_punctatus
ENSSLDG00000003239lig49964.009ENSSTOG00000024303LIG49964.009Ictidomys_tridecemlineatus
ENSSLDG00000003239lig49963.846ENSJJAG00000006750Lig49963.846Jaculus_jaculus
ENSSLDG00000003239lig410083.042ENSKMAG00000001149lig410082.932Kryptolebias_marmoratus
ENSSLDG00000003239lig49186.867ENSLBEG00000014578lig410086.747Labrus_bergylta
ENSSLDG00000003239lig410067.213ENSLACG00000003282LIG410067.213Latimeria_chalumnae
ENSSLDG00000003239lig410071.554ENSLOCG00000008901lig49971.444Lepisosteus_oculatus
ENSSLDG00000003239lig49963.158ENSLAFG00000031152LIG49963.158Loxodonta_africana
ENSSLDG00000003239lig49964.784ENSMFAG00000037235LIG49964.784Macaca_fascicularis
ENSSLDG00000003239lig49964.673ENSMMUG00000008874LIG49964.673Macaca_mulatta
ENSSLDG00000003239lig49964.784ENSMNEG00000023575LIG49964.784Macaca_nemestrina
ENSSLDG00000003239lig49964.673ENSMLEG00000026720LIG49964.673Mandrillus_leucophaeus
ENSSLDG00000003239lig410088.512ENSMAMG00000008472lig49988.512Mastacembelus_armatus
ENSSLDG00000003239lig49986.637ENSMZEG00005001855lig410086.543Maylandia_zebra
ENSSLDG00000003239lig49964.989ENSMGAG00000015532LIG49964.989Meleagris_gallopavo
ENSSLDG00000003239lig49963.012ENSMOCG00000019000Lig49963.012Microtus_ochrogaster
ENSSLDG00000003239lig410086.433ENSMMOG00000004390lig410086.324Mola_mola
ENSSLDG00000003239lig49965.044ENSMODG00000025064LIG49965.265Monodelphis_domestica
ENSSLDG00000003239lig410087.199ENSMALG00000008555lig410087.199Monopterus_albus
ENSSLDG00000003239lig49963.677MGP_CAROLIEiJ_G0030809Lig49963.677Mus_caroli
ENSSLDG00000003239lig49963.787ENSMUSG00000049717Lig49963.787Mus_musculus
ENSSLDG00000003239lig49963.898MGP_PahariEiJ_G0021270Lig49963.898Mus_pahari
ENSSLDG00000003239lig49963.898MGP_SPRETEiJ_G0031917Lig49963.898Mus_spretus
ENSSLDG00000003239lig49963.626ENSMPUG00000018675LIG49963.626Mustela_putorius_furo
ENSSLDG00000003239lig49964.286ENSMLUG00000001267LIG49964.286Myotis_lucifugus
ENSSLDG00000003239lig49963.956ENSNGAG00000013258Lig49963.956Nannospalax_galili
ENSSLDG00000003239lig49986.418ENSNBRG00000021252lig410086.324Neolamprologus_brichardi
ENSSLDG00000003239lig49964.286ENSNLEG00000007888LIG49964.286Nomascus_leucogenys
ENSSLDG00000003239lig49963.234ENSOPRG00000005765LIG49963.234Ochotona_princeps
ENSSLDG00000003239lig49963.123ENSODEG00000019683LIG49963.123Octodon_degus
ENSSLDG00000003239lig49986.747ENSONIG00000011969lig49986.747Oreochromis_niloticus
ENSSLDG00000003239lig49964.120ENSOCUG00000015734LIG49964.120Oryctolagus_cuniculus
ENSSLDG00000003239lig49982.096ENSORLG00000004041lig49982.424Oryzias_latipes
ENSSLDG00000003239lig49982.205ENSORLG00020019607lig49982.533Oryzias_latipes_hni
ENSSLDG00000003239lig49982.205ENSORLG00015017754lig49982.533Oryzias_latipes_hsok
ENSSLDG00000003239lig47587.045ENSOMEG00000003459lig49987.045Oryzias_melastigma
ENSSLDG00000003239lig49964.074ENSOGAG00000032120LIG49964.074Otolemur_garnettii
ENSSLDG00000003239lig48167.204ENSOARG00000005590LIG49867.204Ovis_aries
ENSSLDG00000003239lig49965.055ENSPPAG00000032998LIG49965.055Pan_paniscus
ENSSLDG00000003239lig49964.230ENSPPRG00000017804LIG49964.230Panthera_pardus
ENSSLDG00000003239lig49964.120ENSPTIG00000010051LIG49964.120Panthera_tigris_altaica
ENSSLDG00000003239lig49965.165ENSPTRG00000006025LIG49965.165Pan_troglodytes
ENSSLDG00000003239lig49964.895ENSPANG00000007562LIG49964.895Papio_anubis
ENSSLDG00000003239lig410075.602ENSPKIG00000011645lig49975.492Paramormyrops_kingsleyae
ENSSLDG00000003239lig410066.120ENSPSIG00000001504LIG410066.120Pelodiscus_sinensis
ENSSLDG00000003239lig49878.842ENSPMGG00000013486lig410078.237Periophthalmus_magnuspinnatus
ENSSLDG00000003239lig49963.274ENSPEMG00000000076Lig49963.274Peromyscus_maniculatus_bairdii
ENSSLDG00000003239lig49964.159ENSPCIG00000021882LIG49964.159Phascolarctos_cinereus
ENSSLDG00000003239lig410086.448ENSPFOG00000000797lig410086.667Poecilia_formosa
ENSSLDG00000003239lig410086.339ENSPLAG00000001196lig410086.557Poecilia_latipinna
ENSSLDG00000003239lig410086.339ENSPMEG00000021353lig410086.557Poecilia_mexicana
ENSSLDG00000003239lig410085.574ENSPREG00000007323lig410085.792Poecilia_reticulata
ENSSLDG00000003239lig49964.725ENSPPYG00000005540LIG49964.725Pongo_abelii
ENSSLDG00000003239lig49963.677ENSPVAG00000016403LIG49963.677Pteropus_vampyrus
ENSSLDG00000003239lig49986.637ENSPNYG00000009660lig410086.543Pundamilia_nyererei
ENSSLDG00000003239lig49979.689ENSPNAG00000028056lig49979.578Pygocentrus_nattereri
ENSSLDG00000003239lig49979.689ENSPNAG00000028069LIG49979.578Pygocentrus_nattereri
ENSSLDG00000003239lig49963.677ENSRNOG00000014605Lig49963.677Rattus_norvegicus
ENSSLDG00000003239lig49963.898ENSRBIG00000039962LIG49963.898Rhinopithecus_bieti
ENSSLDG00000003239lig49964.784ENSRROG00000006040LIG49964.784Rhinopithecus_roxellana
ENSSLDG00000003239lig49964.286ENSSBOG00000019029LIG49964.286Saimiri_boliviensis_boliviensis
ENSSLDG00000003239lig49962.058ENSSHAG00000009525LIG49962.389Sarcophilus_harrisii
ENSSLDG00000003239lig410077.462ENSSFOG00015012835lig410077.462Scleropages_formosus
ENSSLDG00000003239lig410083.698ENSSMAG00000011267lig410083.698Scophthalmus_maximus
ENSSLDG00000003239lig410096.827ENSSDUG00000010343lig410096.827Seriola_dumerili
ENSSLDG00000003239lig49962.693ENSSARG00000006573LIG49962.693Sorex_araneus
ENSSLDG00000003239lig49267.417ENSSPUG00000002444LIG410067.378Sphenodon_punctatus
ENSSLDG00000003239lig410087.090ENSSPAG00000001609lig410087.090Stegastes_partitus
ENSSLDG00000003239lig49963.806ENSSSCG00000009540LIG49963.806Sus_scrofa
ENSSLDG00000003239lig49965.376ENSTGUG00000010795LIG49965.338Taeniopygia_guttata
ENSSLDG00000003239lig410084.902ENSTRUG00000009984lig410084.792Takifugu_rubripes
ENSSLDG00000003239lig410081.400ENSTNIG00000010348lig410081.619Tetraodon_nigroviridis
ENSSLDG00000003239lig49963.956ENSTBEG00000017741LIG49963.956Tupaia_belangeri
ENSSLDG00000003239lig49963.956ENSTTRG00000012660LIG49963.956Tursiops_truncatus
ENSSLDG00000003239lig49963.012ENSUAMG00000003773LIG49963.012Ursus_americanus
ENSSLDG00000003239lig410066.120ENSXETG00000002654lig410066.120Xenopus_tropicalis
ENSSLDG00000003239lig410086.120ENSXCOG00000017401lig410086.448Xiphophorus_couchianus
ENSSLDG00000003239lig410086.120ENSXMAG00000015142lig49986.339Xiphophorus_maculatus

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