EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000003287 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-113e8.11
Alias: -
Full Name: uncharacterized LOC111664055
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 1104 bases
Position: chrPEQF01099061.1:849287-850390
Accession: 111664055
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000004139	zf-CCCH	PF00642.24	2.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000004276	-	962	XM_023418516	ENSSLDP00000004139	252 (aa)	XP_023274284	UPI000C6F46F0

Gene Model

Click here to download ENSSLDG00000003287's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000003287's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000003287	si:ch211-113e8.11	100	70.301	ENSAPOG00000010990	si:ch211-113e8.11	100	72.932	Acanthochromis_polyacanthus
ENSSLDG00000003287	si:ch211-113e8.11	59	71.812	ENSACIG00000011566	si:ch211-113e8.11	94	64.151	Amphilophus_citrinellus
ENSSLDG00000003287	si:ch211-113e8.11	100	71.970	ENSAOCG00000022156	si:ch211-113e8.11	100	71.970	Amphiprion_ocellaris
ENSSLDG00000003287	si:ch211-113e8.11	100	71.212	ENSAPEG00000018284	si:ch211-113e8.11	100	71.212	Amphiprion_percula
ENSSLDG00000003287	si:ch211-113e8.11	100	75.875	ENSATEG00000018391	si:ch211-113e8.11	100	73.930	Anabas_testudineus
ENSSLDG00000003287	si:ch211-113e8.11	100	69.020	ENSACLG00000017011	si:ch211-113e8.11	100	69.412	Astatotilapia_calliptera
ENSSLDG00000003287	si:ch211-113e8.11	97	50.379	ENSAMXG00000000733	si:ch211-113e8.11	97	50.000	Astyanax_mexicanus
ENSSLDG00000003287	si:ch211-113e8.11	99	68.582	ENSCSEG00000004538	si:ch211-113e8.11	99	67.433	Cynoglossus_semilaevis
ENSSLDG00000003287	si:ch211-113e8.11	100	60.000	ENSCVAG00000020156	si:ch211-113e8.11	99	60.000	Cyprinodon_variegatus
ENSSLDG00000003287	si:ch211-113e8.11	96	45.382	ENSDARG00000076585	si:ch211-113e8.11	98	47.967	Danio_rerio
ENSSLDG00000003287	si:ch211-113e8.11	59	30.675	FBgn0259728	CG42382	63	31.206	Drosophila_melanogaster
ENSSLDG00000003287	si:ch211-113e8.11	100	54.945	ENSELUG00000001130	si:ch211-113e8.11	100	51.087	Esox_lucius
ENSSLDG00000003287	si:ch211-113e8.11	100	58.366	ENSFHEG00000007870	si:ch211-113e8.11	99	57.088	Fundulus_heteroclitus
ENSSLDG00000003287	si:ch211-113e8.11	100	62.353	ENSGAFG00000020570	si:ch211-113e8.11	100	62.353	Gambusia_affinis
ENSSLDG00000003287	si:ch211-113e8.11	100	69.412	ENSHBUG00000003552	si:ch211-113e8.11	100	69.020	Haplochromis_burtoni
ENSSLDG00000003287	si:ch211-113e8.11	99	55.469	ENSHCOG00000002041	si:ch211-113e8.11	99	54.231	Hippocampus_comes
ENSSLDG00000003287	si:ch211-113e8.11	96	51.969	ENSIPUG00000002260	si:ch211-113e8.11	94	51.181	Ictalurus_punctatus
ENSSLDG00000003287	si:ch211-113e8.11	100	66.406	ENSKMAG00000000086	si:ch211-113e8.11	99	65.370	Kryptolebias_marmoratus
ENSSLDG00000003287	si:ch211-113e8.11	100	64.552	ENSLBEG00000008353	si:ch211-113e8.11	100	66.171	Labrus_bergylta
ENSSLDG00000003287	si:ch211-113e8.11	75	38.660	ENSLACG00000004304	si:ch211-113e8.11	83	42.162	Latimeria_chalumnae
ENSSLDG00000003287	si:ch211-113e8.11	90	75.107	ENSMAMG00000019098	si:ch211-113e8.11	93	75.000	Mastacembelus_armatus
ENSSLDG00000003287	si:ch211-113e8.11	100	67.843	ENSMZEG00005023658	si:ch211-113e8.11	100	68.235	Maylandia_zebra
ENSSLDG00000003287	si:ch211-113e8.11	73	70.270	ENSMMOG00000007254	si:ch211-113e8.11	100	60.714	Mola_mola
ENSSLDG00000003287	si:ch211-113e8.11	100	77.011	ENSMALG00000005110	si:ch211-113e8.11	100	75.290	Monopterus_albus
ENSSLDG00000003287	si:ch211-113e8.11	100	69.804	ENSNBRG00000015060	si:ch211-113e8.11	100	70.196	Neolamprologus_brichardi
ENSSLDG00000003287	si:ch211-113e8.11	100	62.308	ENSORLG00000023699	si:ch211-113e8.11	100	58.015	Oryzias_latipes
ENSSLDG00000003287	si:ch211-113e8.11	100	64.615	ENSORLG00020022094	si:ch211-113e8.11	100	61.154	Oryzias_latipes_hni
ENSSLDG00000003287	si:ch211-113e8.11	100	61.538	ENSORLG00015002588	si:ch211-113e8.11	100	57.634	Oryzias_latipes_hsok
ENSSLDG00000003287	si:ch211-113e8.11	100	62.598	ENSOMEG00000010624	si:ch211-113e8.11	100	62.598	Oryzias_melastigma
ENSSLDG00000003287	si:ch211-113e8.11	87	44.000	ENSPKIG00000023576	si:ch211-113e8.11	96	42.912	Paramormyrops_kingsleyae
ENSSLDG00000003287	si:ch211-113e8.11	96	56.098	ENSPMGG00000018547	si:ch211-113e8.11	97	58.607	Periophthalmus_magnuspinnatus
ENSSLDG00000003287	si:ch211-113e8.11	98	63.855	ENSPFOG00000007950	si:ch211-113e8.11	100	64.400	Poecilia_formosa
ENSSLDG00000003287	si:ch211-113e8.11	100	64.314	ENSPLAG00000002081	si:ch211-113e8.11	100	65.234	Poecilia_latipinna
ENSSLDG00000003287	si:ch211-113e8.11	100	64.314	ENSPMEG00000017505	si:ch211-113e8.11	100	65.234	Poecilia_mexicana
ENSSLDG00000003287	si:ch211-113e8.11	100	63.492	ENSPREG00000008530	si:ch211-113e8.11	100	64.427	Poecilia_reticulata
ENSSLDG00000003287	si:ch211-113e8.11	100	69.412	ENSPNYG00000022856	si:ch211-113e8.11	100	69.804	Pundamilia_nyererei
ENSSLDG00000003287	si:ch211-113e8.11	98	41.418	ENSPNAG00000013782	si:ch211-113e8.11	99	44.358	Pygocentrus_nattereri
ENSSLDG00000003287	si:ch211-113e8.11	97	49.606	ENSSFOG00015000959	si:ch211-113e8.11	97	48.425	Scleropages_formosus
ENSSLDG00000003287	si:ch211-113e8.11	100	78.261	ENSSMAG00000009732	si:ch211-113e8.11	100	79.447	Scophthalmus_maximus
ENSSLDG00000003287	si:ch211-113e8.11	100	98.016	ENSSDUG00000000112	si:ch211-113e8.11	100	98.016	Seriola_dumerili
ENSSLDG00000003287	si:ch211-113e8.11	100	73.764	ENSSPAG00000001375	si:ch211-113e8.11	100	73.384	Stegastes_partitus
ENSSLDG00000003287	si:ch211-113e8.11	99	57.422	ENSTRUG00000023898	si:ch211-113e8.11	99	57.422	Takifugu_rubripes
ENSSLDG00000003287	si:ch211-113e8.11	100	63.137	ENSXMAG00000024104	si:ch211-113e8.11	100	64.062	Xiphophorus_maculatus