EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000003339 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 1822 bases
Position: chrPEQF01064123.1:21-1842
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000004205	RVT_1	PF00078.27	4.8e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000004347	-	1822	-	ENSSLDP00000004205	496 (aa)	-	-

Gene Model

Click here to download ENSSLDG00000003339's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000003339's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000003339	-	69	46.491	ENSSLDG00000020897	-	90	46.491

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000003339	-	58	50.000	ENSAOCG00000007213	-	74	50.000	Amphiprion_ocellaris
ENSSLDG00000003339	-	54	35.125	ENSATEG00000001648	-	65	35.125	Anabas_testudineus
ENSSLDG00000003339	-	68	37.037	ENSATEG00000021223	-	76	37.037	Anabas_testudineus
ENSSLDG00000003339	-	68	37.037	ENSATEG00000002616	-	80	37.037	Anabas_testudineus
ENSSLDG00000003339	-	68	37.037	ENSATEG00000010702	-	80	37.037	Anabas_testudineus
ENSSLDG00000003339	-	68	37.037	ENSATEG00000020541	-	78	37.037	Anabas_testudineus
ENSSLDG00000003339	-	68	37.037	ENSATEG00000004130	-	83	37.037	Anabas_testudineus
ENSSLDG00000003339	-	67	37.037	ENSATEG00000022553	-	89	37.037	Anabas_testudineus
ENSSLDG00000003339	-	91	30.901	ENSAMXG00000035523	-	82	30.901	Astyanax_mexicanus
ENSSLDG00000003339	-	58	37.542	ENSAMXG00000039759	-	67	37.542	Astyanax_mexicanus
ENSSLDG00000003339	-	60	40.625	ENSCPBG00000001785	-	86	40.625	Chrysemys_picta_bellii
ENSSLDG00000003339	-	53	45.312	ENSCPBG00000000566	-	74	45.312	Chrysemys_picta_bellii
ENSSLDG00000003339	-	51	43.750	ENSCPBG00000007878	-	65	43.750	Chrysemys_picta_bellii
ENSSLDG00000003339	-	53	42.188	ENSGAGG00000006697	-	66	42.188	Gopherus_agassizii
ENSSLDG00000003339	-	62	61.564	ENSHBUG00000019642	-	79	61.564	Haplochromis_burtoni
ENSSLDG00000003339	-	52	33.829	ENSIPUG00000008898	-	61	33.829	Ictalurus_punctatus
ENSSLDG00000003339	-	87	36.538	ENSLBEG00000021481	-	74	36.538	Labrus_bergylta
ENSSLDG00000003339	-	53	45.312	ENSLBEG00000016646	-	70	45.312	Labrus_bergylta
ENSSLDG00000003339	-	94	30.200	ENSMAMG00000013736	-	98	30.200	Mastacembelus_armatus
ENSSLDG00000003339	-	53	46.816	ENSMAMG00000009166	-	76	50.943	Mastacembelus_armatus
ENSSLDG00000003339	-	60	45.455	ENSMODG00000028946	-	81	45.455	Monodelphis_domestica
ENSSLDG00000003339	-	55	48.276	ENSMODG00000028620	-	92	48.276	Monodelphis_domestica
ENSSLDG00000003339	-	50	45.455	ENSMODG00000029114	-	89	45.455	Monodelphis_domestica
ENSSLDG00000003339	-	58	48.276	ENSMODG00000029538	-	77	48.276	Monodelphis_domestica
ENSSLDG00000003339	-	60	45.455	ENSMODG00000029539	-	88	45.455	Monodelphis_domestica
ENSSLDG00000003339	-	60	45.455	ENSMODG00000029588	-	76	45.455	Monodelphis_domestica
ENSSLDG00000003339	-	60	45.455	ENSMODG00000028171	-	71	45.455	Monodelphis_domestica
ENSSLDG00000003339	-	60	45.455	ENSMODG00000029572	-	62	45.455	Monodelphis_domestica
ENSSLDG00000003339	-	60	45.455	ENSMODG00000028270	-	82	45.455	Monodelphis_domestica
ENSSLDG00000003339	-	59	43.939	ENSMODG00000028332	-	64	43.939	Monodelphis_domestica
ENSSLDG00000003339	-	60	45.455	ENSMODG00000028146	-	61	45.455	Monodelphis_domestica
ENSSLDG00000003339	-	60	44.118	ENSMODG00000029251	-	93	45.455	Monodelphis_domestica
ENSSLDG00000003339	-	55	44.485	ENSMALG00000003136	-	81	44.485	Monopterus_albus
ENSSLDG00000003339	-	60	40.199	ENSMALG00000008335	-	93	40.199	Monopterus_albus
ENSSLDG00000003339	-	62	42.718	ENSMALG00000008425	-	94	42.718	Monopterus_albus
ENSSLDG00000003339	-	100	35.673	ENSOMEG00000000207	-	77	35.673	Oryzias_melastigma
ENSSLDG00000003339	-	99	63.000	ENSPKIG00000010196	-	88	63.000	Paramormyrops_kingsleyae
ENSSLDG00000003339	-	99	62.325	ENSPKIG00000002864	-	76	62.325	Paramormyrops_kingsleyae
ENSSLDG00000003339	-	65	38.390	ENSPMGG00000024049	-	98	38.390	Periophthalmus_magnuspinnatus
ENSSLDG00000003339	-	58	40.541	ENSPNAG00000001571	-	70	40.541	Pygocentrus_nattereri
ENSSLDG00000003339	-	94	39.791	ENSPNAG00000015817	-	79	39.791	Pygocentrus_nattereri
ENSSLDG00000003339	-	60	41.935	ENSPNAG00000021668	-	71	41.935	Pygocentrus_nattereri
ENSSLDG00000003339	-	60	38.983	ENSPNAG00000024551	-	64	38.983	Pygocentrus_nattereri
ENSSLDG00000003339	-	54	42.373	ENSSDUG00000023123	-	63	42.373	Seriola_dumerili