EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000003393 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-212k18.5
Alias: fb25b09|wu:fb25b09
Full Name: spalt like transcription factor 2
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 7030 bases
Position: chrPEQF01099458.1:284645-291674
Accession: 111647134
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000004296	zf-C2H2	PF00096.26	5.9e-19	1	2
ENSSLDP00000004296	zf-C2H2	PF00096.26	5.9e-19	2	2
ENSSLDP00000004280	zf-C2H2	PF00096.26	6.7e-19	1	2
ENSSLDP00000004280	zf-C2H2	PF00096.26	6.7e-19	2	2
ENSSLDP00000004296	zf-met	PF12874.7	8.1e-11	1	2
ENSSLDP00000004296	zf-met	PF12874.7	8.1e-11	2	2
ENSSLDP00000004280	zf-met	PF12874.7	9.6e-11	1	2
ENSSLDP00000004280	zf-met	PF12874.7	9.6e-11	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000004439	-	3624	-	ENSSLDP00000004296	1207 (aa)	-	-
ENSSLDT00000004423	-	5136	XM_023396738	ENSSLDP00000004280	1231 (aa)	XP_023252506	UPI000C6F646A

Gene Model

Click here to download ENSSLDG00000003393's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000003393's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000003393	si:ch211-212k18.5	95	40.058	ENSSLDG00000001653	sall2	94	40.700

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000003393	si:ch211-212k18.5	100	84.372	ENSAPOG00000013387	si:ch211-212k18.5	100	84.453	Acanthochromis_polyacanthus
ENSSLDG00000003393	si:ch211-212k18.5	95	40.435	ENSAPOG00000015347	sall2	87	41.759	Acanthochromis_polyacanthus
ENSSLDG00000003393	si:ch211-212k18.5	80	86.151	ENSACIG00000019922	si:ch211-212k18.5	99	87.666	Amphilophus_citrinellus
ENSSLDG00000003393	si:ch211-212k18.5	95	40.959	ENSAOCG00000016559	sall2	87	41.204	Amphiprion_ocellaris
ENSSLDG00000003393	si:ch211-212k18.5	100	83.871	ENSAOCG00000010737	si:ch211-212k18.5	100	84.615	Amphiprion_ocellaris
ENSSLDG00000003393	si:ch211-212k18.5	100	83.871	ENSAPEG00000006751	si:ch211-212k18.5	100	84.615	Amphiprion_percula
ENSSLDG00000003393	si:ch211-212k18.5	60	45.169	ENSAPEG00000020215	sall2	91	46.721	Amphiprion_percula
ENSSLDG00000003393	si:ch211-212k18.5	77	87.771	ENSATEG00000001254	si:ch211-212k18.5	100	88.571	Anabas_testudineus
ENSSLDG00000003393	si:ch211-212k18.5	73	71.111	ENSATEG00000007303	sall2	80	71.111	Anabas_testudineus
ENSSLDG00000003393	si:ch211-212k18.5	61	45.165	ENSACLG00000019867	sall2	66	43.945	Astatotilapia_calliptera
ENSSLDG00000003393	si:ch211-212k18.5	100	79.566	ENSACLG00000009709	si:ch211-212k18.5	100	79.887	Astatotilapia_calliptera
ENSSLDG00000003393	si:ch211-212k18.5	53	49.929	ENSAMXG00000020956	sall2	57	48.625	Astyanax_mexicanus
ENSSLDG00000003393	si:ch211-212k18.5	99	57.377	ENSAMXG00000010979	si:ch211-212k18.5	99	57.061	Astyanax_mexicanus
ENSSLDG00000003393	si:ch211-212k18.5	99	77.688	ENSCSEG00000004426	si:ch211-212k18.5	99	77.607	Cynoglossus_semilaevis
ENSSLDG00000003393	si:ch211-212k18.5	58	47.287	ENSCVAG00000006032	sall2	64	46.774	Cyprinodon_variegatus
ENSSLDG00000003393	si:ch211-212k18.5	99	74.311	ENSCVAG00000007475	si:ch211-212k18.5	99	75.770	Cyprinodon_variegatus
ENSSLDG00000003393	si:ch211-212k18.5	71	46.875	ENSDARG00000075116	sall2	65	48.023	Danio_rerio
ENSSLDG00000003393	si:ch211-212k18.5	96	56.832	ENSDARG00000103316	si:ch211-212k18.5	96	56.412	Danio_rerio
ENSSLDG00000003393	si:ch211-212k18.5	99	59.569	ENSELUG00000024534	si:ch211-212k18.5	99	58.964	Esox_lucius
ENSSLDG00000003393	si:ch211-212k18.5	72	54.167	ENSELUG00000004389	sall2	69	56.522	Esox_lucius
ENSSLDG00000003393	si:ch211-212k18.5	53	47.273	ENSFHEG00000017550	sall2	59	46.667	Fundulus_heteroclitus
ENSSLDG00000003393	si:ch211-212k18.5	99	76.823	ENSFHEG00000017264	si:ch211-212k18.5	99	77.310	Fundulus_heteroclitus
ENSSLDG00000003393	si:ch211-212k18.5	99	75.831	ENSGAFG00000003746	si:ch211-212k18.5	100	75.932	Gambusia_affinis
ENSSLDG00000003393	si:ch211-212k18.5	54	47.922	ENSGAFG00000015194	sall2	59	47.375	Gambusia_affinis
ENSSLDG00000003393	si:ch211-212k18.5	100	79.726	ENSHBUG00000019672	si:ch211-212k18.5	100	80.048	Haplochromis_burtoni
ENSSLDG00000003393	si:ch211-212k18.5	81	53.061	ENSHBUG00000002882	sall2	74	41.590	Haplochromis_burtoni
ENSSLDG00000003393	si:ch211-212k18.5	97	64.516	ENSHCOG00000002842	si:ch211-212k18.5	98	64.020	Hippocampus_comes
ENSSLDG00000003393	si:ch211-212k18.5	98	53.895	ENSIPUG00000002559	sall2	99	53.108	Ictalurus_punctatus
ENSSLDG00000003393	si:ch211-212k18.5	99	74.919	ENSKMAG00000019657	si:ch211-212k18.5	100	75.765	Kryptolebias_marmoratus
ENSSLDG00000003393	si:ch211-212k18.5	100	80.260	ENSLBEG00000020887	si:ch211-212k18.5	100	80.016	Labrus_bergylta
ENSSLDG00000003393	si:ch211-212k18.5	81	39.547	ENSMAMG00000016229	sall2	81	66.667	Mastacembelus_armatus
ENSSLDG00000003393	si:ch211-212k18.5	70	91.512	ENSMAMG00000015887	si:ch211-212k18.5	99	91.047	Mastacembelus_armatus
ENSSLDG00000003393	si:ch211-212k18.5	81	53.061	ENSMZEG00005012103	sall2	74	41.590	Maylandia_zebra
ENSSLDG00000003393	si:ch211-212k18.5	100	79.646	ENSMZEG00005021214	si:ch211-212k18.5	100	79.968	Maylandia_zebra
ENSSLDG00000003393	si:ch211-212k18.5	92	86.937	ENSMMOG00000012726	si:ch211-212k18.5	100	86.599	Mola_mola
ENSSLDG00000003393	si:ch211-212k18.5	92	83.899	ENSMALG00000000979	si:ch211-212k18.5	97	83.812	Monopterus_albus
ENSSLDG00000003393	si:ch211-212k18.5	94	78.490	ENSNBRG00000023948	si:ch211-212k18.5	99	76.371	Neolamprologus_brichardi
ENSSLDG00000003393	si:ch211-212k18.5	68	46.801	ENSNBRG00000017645	sall2	76	46.075	Neolamprologus_brichardi
ENSSLDG00000003393	si:ch211-212k18.5	54	47.036	ENSORLG00000026871	sall2	59	47.480	Oryzias_latipes
ENSSLDG00000003393	si:ch211-212k18.5	99	73.131	ENSORLG00000030429	si:ch211-212k18.5	99	73.645	Oryzias_latipes
ENSSLDG00000003393	si:ch211-212k18.5	99	72.884	ENSORLG00020008145	si:ch211-212k18.5	99	73.563	Oryzias_latipes_hni
ENSSLDG00000003393	si:ch211-212k18.5	54	46.842	ENSORLG00020007873	sall2	59	47.215	Oryzias_latipes_hni
ENSSLDG00000003393	si:ch211-212k18.5	54	47.059	ENSORLG00015002422	sall2	88	39.415	Oryzias_latipes_hsok
ENSSLDG00000003393	si:ch211-212k18.5	99	72.720	ENSORLG00015004982	si:ch211-212k18.5	99	73.235	Oryzias_latipes_hsok
ENSSLDG00000003393	si:ch211-212k18.5	100	71.590	ENSOMEG00000013949	si:ch211-212k18.5	100	72.155	Oryzias_melastigma
ENSSLDG00000003393	si:ch211-212k18.5	54	47.513	ENSOMEG00000012904	sall2	59	46.982	Oryzias_melastigma
ENSSLDG00000003393	si:ch211-212k18.5	94	67.962	ENSPMGG00000018714	si:ch211-212k18.5	99	68.653	Periophthalmus_magnuspinnatus
ENSSLDG00000003393	si:ch211-212k18.5	99	76.980	ENSPFOG00000023705	si:ch211-212k18.5	99	78.238	Poecilia_formosa
ENSSLDG00000003393	si:ch211-212k18.5	57	57.778	ENSPFOG00000016504	sall2	61	47.967	Poecilia_formosa
ENSSLDG00000003393	si:ch211-212k18.5	57	57.778	ENSPLAG00000018320	sall2	62	57.778	Poecilia_latipinna
ENSSLDG00000003393	si:ch211-212k18.5	99	76.183	ENSPLAG00000002577	si:ch211-212k18.5	100	76.923	Poecilia_latipinna
ENSSLDG00000003393	si:ch211-212k18.5	99	76.816	ENSPMEG00000016395	si:ch211-212k18.5	99	78.066	Poecilia_mexicana
ENSSLDG00000003393	si:ch211-212k18.5	57	57.778	ENSPMEG00000006335	sall2	59	46.563	Poecilia_mexicana
ENSSLDG00000003393	si:ch211-212k18.5	99	76.094	ENSPREG00000005292	si:ch211-212k18.5	100	76.194	Poecilia_reticulata
ENSSLDG00000003393	si:ch211-212k18.5	100	77.796	ENSPNYG00000021576	si:ch211-212k18.5	100	78.207	Pundamilia_nyererei
ENSSLDG00000003393	si:ch211-212k18.5	57	45.583	ENSPNAG00000021463	sall2	88	41.581	Pygocentrus_nattereri
ENSSLDG00000003393	si:ch211-212k18.5	98	58.286	ENSPNAG00000006123	si:ch211-212k18.5	98	58.238	Pygocentrus_nattereri
ENSSLDG00000003393	si:ch211-212k18.5	100	86.010	ENSSMAG00000006241	si:ch211-212k18.5	100	86.175	Scophthalmus_maximus
ENSSLDG00000003393	si:ch211-212k18.5	69	44.734	ENSSMAG00000014157	sall2	93	39.971	Scophthalmus_maximus
ENSSLDG00000003393	si:ch211-212k18.5	100	98.840	ENSSDUG00000006164	si:ch211-212k18.5	100	98.840	Seriola_dumerili
ENSSLDG00000003393	si:ch211-212k18.5	95	39.884	ENSSDUG00000012274	sall2	94	40.507	Seriola_dumerili
ENSSLDG00000003393	si:ch211-212k18.5	87	41.052	ENSSPAG00000023009	sall2	94	40.204	Stegastes_partitus
ENSSLDG00000003393	si:ch211-212k18.5	94	85.991	ENSSPAG00000013435	si:ch211-212k18.5	97	85.991	Stegastes_partitus
ENSSLDG00000003393	si:ch211-212k18.5	88	78.929	ENSTRUG00000025082	si:ch211-212k18.5	95	79.271	Takifugu_rubripes
ENSSLDG00000003393	si:ch211-212k18.5	99	75.187	ENSXCOG00000000762	si:ch211-212k18.5	100	75.083	Xiphophorus_couchianus
ENSSLDG00000003393	si:ch211-212k18.5	99	75.673	ENSXMAG00000001461	si:ch211-212k18.5	100	75.566	Xiphophorus_maculatus
ENSSLDG00000003393	si:ch211-212k18.5	54	47.294	ENSXMAG00000000902	sall2	59	47.021	Xiphophorus_maculatus