EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000003408 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: FA complementation group M
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 39128 bases
Position: chrPEQF01096521.1:201530-240657
Accession: 111649835
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000004268	ResIII	PF04851.15	2.1e-17	1	1
ENSSLDP00000004268	DEAD	PF00270.29	2.8e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000004411	-	6669	XM_023399531	ENSSLDP00000004268	2152 (aa)	XP_023255299	UPI000C6FC207

Gene Model

Click here to download ENSSLDG00000003408's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000003408's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000003408	-	77	48.749	ENSG00000187790	FANCM	96	59.212	Homo_sapiens
ENSSLDG00000003408	-	76	56.055	ENSAMEG00000002114	FANCM	88	48.887	Ailuropoda_melanoleuca
ENSSLDG00000003408	-	99	75.897	ENSATEG00000012412	-	99	75.851	Anabas_testudineus
ENSSLDG00000003408	-	77	48.330	ENSANAG00000025075	FANCM	79	47.866	Aotus_nancymaae
ENSSLDG00000003408	-	99	70.179	ENSACLG00000016008	-	99	70.364	Astatotilapia_calliptera
ENSSLDG00000003408	-	88	44.842	ENSAMXG00000020275	-	97	50.865	Astyanax_mexicanus
ENSSLDG00000003408	-	85	49.770	ENSBTAG00000002612	FANCM	94	56.049	Bos_taurus
ENSSLDG00000003408	-	77	48.976	ENSCJAG00000015945	FANCM	79	48.513	Callithrix_jacchus
ENSSLDG00000003408	-	85	48.995	ENSCAFG00000014062	FANCM	88	49.219	Canis_familiaris
ENSSLDG00000003408	-	77	56.829	ENSCHIG00000015176	FANCM	89	49.497	Capra_hircus
ENSSLDG00000003408	-	76	55.607	ENSCPOG00000001446	FANCM	78	55.491	Cavia_porcellus
ENSSLDG00000003408	-	73	48.516	ENSCCAG00000026593	FANCM	77	48.237	Cebus_capucinus
ENSSLDG00000003408	-	68	55.196	ENSCSAG00000015308	FANCM	68	54.776	Chlorocebus_sabaeus
ENSSLDG00000003408	-	92	40.217	ENSCPBG00000015089	FANCM	96	44.592	Chrysemys_picta_bellii
ENSSLDG00000003408	-	77	48.563	ENSCANG00000029498	FANCM	79	48.285	Colobus_angolensis_palliatus
ENSSLDG00000003408	-	68	55.568	ENSCGRG00001023573	Fancm	69	55.104	Cricetulus_griseus_chok1gshd
ENSSLDG00000003408	-	99	63.465	ENSCSEG00000002313	-	99	63.545	Cynoglossus_semilaevis
ENSSLDG00000003408	-	89	64.717	ENSCVAG00000015579	-	98	63.803	Cyprinodon_variegatus
ENSSLDG00000003408	-	86	47.978	ENSDNOG00000007697	FANCM	89	48.338	Dasypus_novemcinctus
ENSSLDG00000003408	-	72	49.217	ENSDORG00000010095	Fancm	74	48.756	Dipodomys_ordii
ENSSLDG00000003408	-	61	59.327	ENSETEG00000003360	FANCM	61	59.327	Echinops_telfairi
ENSSLDG00000003408	-	66	56.134	ENSEASG00005007781	FANCM	96	60.227	Equus_asinus_asinus
ENSSLDG00000003408	-	70	56.250	ENSECAG00000018694	FANCM	71	48.711	Equus_caballus
ENSSLDG00000003408	-	61	44.386	ENSEEUG00000005607	-	72	41.944	Erinaceus_europaeus
ENSSLDG00000003408	-	88	55.128	ENSELUG00000015761	-	94	55.016	Esox_lucius
ENSSLDG00000003408	-	71	55.876	ENSFDAG00000009043	FANCM	74	55.645	Fukomys_damarensis
ENSSLDG00000003408	-	89	71.163	ENSGMOG00000002019	-	96	67.045	Gadus_morhua
ENSSLDG00000003408	-	71	49.489	ENSGALG00000031182	FANCM	86	48.891	Gallus_gallus
ENSSLDG00000003408	-	99	59.590	ENSGACG00000009448	-	97	64.965	Gasterosteus_aculeatus
ENSSLDG00000003408	-	77	48.749	ENSGGOG00000008546	FANCM	79	48.747	Gorilla_gorilla
ENSSLDG00000003408	-	99	69.028	ENSHBUG00000007085	-	99	69.255	Haplochromis_burtoni
ENSSLDG00000003408	-	86	48.251	ENSHGLG00000013787	FANCM	86	48.373	Heterocephalus_glaber_female
ENSSLDG00000003408	-	86	48.251	ENSHGLG00100006377	FANCM	86	48.373	Heterocephalus_glaber_male
ENSSLDG00000003408	-	78	63.964	ENSIPUG00000014629	fancm	88	63.539	Ictalurus_punctatus
ENSSLDG00000003408	-	87	68.163	ENSLBEG00000004982	-	99	66.809	Labrus_bergylta
ENSSLDG00000003408	-	93	44.757	ENSLACG00000007739	FANCM	96	43.897	Latimeria_chalumnae
ENSSLDG00000003408	-	99	46.432	ENSLOCG00000011318	FANCM	96	54.638	Lepisosteus_oculatus
ENSSLDG00000003408	-	75	56.398	ENSLAFG00000001136	FANCM	89	48.499	Loxodonta_africana
ENSSLDG00000003408	-	77	46.062	ENSMFAG00000000383	FANCM	79	47.658	Macaca_fascicularis
ENSSLDG00000003408	-	77	46.154	ENSMMUG00000016513	FANCM	79	47.658	Macaca_mulatta
ENSSLDG00000003408	-	77	46.062	ENSMNEG00000038659	FANCM	79	47.658	Macaca_nemestrina
ENSSLDG00000003408	-	51	48.654	ENSMLEG00000035743	FANCM	78	48.560	Mandrillus_leucophaeus
ENSSLDG00000003408	-	99	73.330	ENSMAMG00000007087	-	99	73.010	Mastacembelus_armatus
ENSSLDG00000003408	-	99	70.179	ENSMZEG00005004644	-	99	70.318	Maylandia_zebra
ENSSLDG00000003408	-	68	51.796	ENSMAUG00000015450	Fancm	70	51.639	Mesocricetus_auratus
ENSSLDG00000003408	-	77	49.164	ENSMICG00000005811	FANCM	79	48.978	Microcebus_murinus
ENSSLDG00000003408	-	90	65.085	ENSMMOG00000010215	-	99	64.763	Mola_mola
ENSSLDG00000003408	-	79	51.915	ENSMODG00000007334	FANCM	81	51.757	Monodelphis_domestica
ENSSLDG00000003408	-	87	47.834	MGP_CAROLIEiJ_G0017791	Fancm	89	47.744	Mus_caroli
ENSSLDG00000003408	-	86	47.529	ENSMUSG00000055884	Fancm	95	58.840	Mus_musculus
ENSSLDG00000003408	-	86	44.794	MGP_PahariEiJ_G0029547	Fancm	87	46.667	Mus_pahari
ENSSLDG00000003408	-	86	47.439	MGP_SPRETEiJ_G0018636	Fancm	87	49.516	Mus_spretus
ENSSLDG00000003408	-	76	56.019	ENSMPUG00000004849	FANCM	78	55.671	Mustela_putorius_furo
ENSSLDG00000003408	-	89	49.120	ENSMLUG00000006671	FANCM	89	48.516	Myotis_lucifugus
ENSSLDG00000003408	-	73	57.834	ENSNGAG00000017199	Fancm	78	54.167	Nannospalax_galili
ENSSLDG00000003408	-	85	48.981	ENSNLEG00000004432	FANCM	88	48.519	Nomascus_leucogenys
ENSSLDG00000003408	-	55	51.736	ENSMEUG00000004977	-	59	48.858	Notamacropus_eugenii
ENSSLDG00000003408	-	93	79.698	ENSONIG00000003531	-	99	69.665	Oreochromis_niloticus
ENSSLDG00000003408	-	69	60.168	ENSOANG00000013997	FANCM	78	59.471	Ornithorhynchus_anatinus
ENSSLDG00000003408	-	78	54.934	ENSOCUG00000007539	FANCM	90	49.771	Oryctolagus_cuniculus
ENSSLDG00000003408	-	99	62.569	ENSORLG00000014503	-	99	62.512	Oryzias_latipes
ENSSLDG00000003408	-	99	62.627	ENSORLG00020013516	-	99	62.569	Oryzias_latipes_hni
ENSSLDG00000003408	-	99	62.298	ENSORLG00015012100	-	99	62.160	Oryzias_latipes_hsok
ENSSLDG00000003408	-	99	61.299	ENSOMEG00000010717	-	96	66.530	Oryzias_melastigma
ENSSLDG00000003408	-	83	50.437	ENSOGAG00000003015	FANCM	88	48.387	Otolemur_garnettii
ENSSLDG00000003408	-	77	56.829	ENSOARG00000009429	FANCM	89	48.987	Ovis_aries
ENSSLDG00000003408	-	77	49.120	ENSPPAG00000028944	FANCM	79	49.118	Pan_paniscus
ENSSLDG00000003408	-	77	48.842	ENSPTRG00000006307	FANCM	79	48.839	Pan_troglodytes
ENSSLDG00000003408	-	79	81.361	ENSPFOG00000002008	-	83	81.361	Poecilia_formosa
ENSSLDG00000003408	-	94	66.966	ENSPLAG00000014164	-	97	66.803	Poecilia_latipinna
ENSSLDG00000003408	-	94	66.830	ENSPMEG00000010746	-	96	66.667	Poecilia_mexicana
ENSSLDG00000003408	-	99	61.168	ENSPREG00000019849	-	96	66.748	Poecilia_reticulata
ENSSLDG00000003408	-	77	48.656	ENSPPYG00000005781	FANCM	83	48.654	Pongo_abelii
ENSSLDG00000003408	-	58	54.179	ENSPCAG00000011363	-	57	54.179	Procavia_capensis
ENSSLDG00000003408	-	77	55.621	ENSPCOG00000014388	FANCM	86	48.673	Propithecus_coquereli
ENSSLDG00000003408	-	68	54.393	ENSPVAG00000015802	FANCM	69	53.975	Pteropus_vampyrus
ENSSLDG00000003408	-	94	47.152	ENSPNAG00000013558	-	97	47.294	Pygocentrus_nattereri
ENSSLDG00000003408	-	94	43.262	ENSRNOG00000056721	Fancm	92	50.158	Rattus_norvegicus
ENSSLDG00000003408	-	77	48.346	ENSRBIG00000011451	FANCM	79	48.026	Rhinopithecus_bieti
ENSSLDG00000003408	-	68	55.556	ENSRROG00000028917	FANCM	79	48.029	Rhinopithecus_roxellana
ENSSLDG00000003408	-	77	48.237	ENSSBOG00000030882	FANCM	79	47.959	Saimiri_boliviensis_boliviensis
ENSSLDG00000003408	-	73	50.634	ENSSHAG00000000507	FANCM	90	47.393	Sarcophilus_harrisii
ENSSLDG00000003408	-	99	75.692	ENSSMAG00000019903	-	99	85.507	Scophthalmus_maximus
ENSSLDG00000003408	-	72	97.150	ENSSDUG00000016682	-	99	97.150	Seriola_dumerili
ENSSLDG00000003408	-	52	57.927	ENSSARG00000002618	FANCM	51	57.751	Sorex_araneus
ENSSLDG00000003408	-	76	55.968	ENSSSCG00000005000	FANCM	88	48.292	Sus_scrofa
ENSSLDG00000003408	-	99	58.872	ENSTNIG00000017277	-	98	63.395	Tetraodon_nigroviridis
ENSSLDG00000003408	-	86	47.985	ENSTTRG00000006669	FANCM	89	47.479	Tursiops_truncatus
ENSSLDG00000003408	-	64	59.078	ENSVPAG00000005763	FANCM	63	58.213	Vicugna_pacos
ENSSLDG00000003408	-	76	55.811	ENSVVUG00000000357	FANCM	88	49.214	Vulpes_vulpes
ENSSLDG00000003408	-	99	60.787	ENSXMAG00000007702	-	99	60.970	Xiphophorus_maculatus