EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000003462 (Gene tree)
Gene ID: -
Gene Symbol: si:dkey-10o6.2
Alias: -
Full Name: UPF0676 protein C1494.01-like
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 7269 bases
Position: chrPEQF01096753.1:3967808-3975076
Accession: 111650405
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000004371	2OG-FeII_Oxy	PF03171.20	6.6e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000004518	-	5354	XM_023400302	ENSSLDP00000004371	311 (aa)	XP_023256070	UPI000C6FA99D

Gene Model

Click here to download ENSSLDG00000003462's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000003462's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000003462	si:dkey-10o6.2	83	82.558	ENSAPOG00000011678	si:dkey-10o6.2	90	82.558	Acanthochromis_polyacanthus
ENSSLDG00000003462	si:dkey-10o6.2	100	81.672	ENSACIG00000011675	-	100	81.672	Amphilophus_citrinellus
ENSSLDG00000003462	si:dkey-10o6.2	97	83.113	ENSACIG00000024115	si:dkey-10o6.2	96	83.113	Amphilophus_citrinellus
ENSSLDG00000003462	si:dkey-10o6.2	99	82.792	ENSAOCG00000013068	si:dkey-10o6.2	99	82.792	Amphiprion_ocellaris
ENSSLDG00000003462	si:dkey-10o6.2	99	83.117	ENSAPEG00000011246	si:dkey-10o6.2	99	83.117	Amphiprion_percula
ENSSLDG00000003462	si:dkey-10o6.2	100	85.531	ENSATEG00000021945	si:dkey-10o6.2	100	85.531	Anabas_testudineus
ENSSLDG00000003462	si:dkey-10o6.2	100	81.672	ENSATEG00000000030	si:dkey-10o6.2	100	81.672	Anabas_testudineus
ENSSLDG00000003462	si:dkey-10o6.2	100	78.457	ENSATEG00000021952	si:dkey-10o6.2	100	78.457	Anabas_testudineus
ENSSLDG00000003462	si:dkey-10o6.2	100	82.958	ENSACLG00000023011	si:dkey-10o6.2	100	82.958	Astatotilapia_calliptera
ENSSLDG00000003462	si:dkey-10o6.2	99	66.129	ENSAMXG00000021555	si:dkey-10o6.2	99	66.129	Astyanax_mexicanus
ENSSLDG00000003462	si:dkey-10o6.2	90	36.332	ENSCING00000022311	-	88	36.332	Ciona_intestinalis
ENSSLDG00000003462	si:dkey-10o6.2	99	35.780	ENSCING00000016920	-	94	35.780	Ciona_intestinalis
ENSSLDG00000003462	si:dkey-10o6.2	76	42.623	ENSCING00000011926	-	99	42.623	Ciona_intestinalis
ENSSLDG00000003462	si:dkey-10o6.2	99	40.060	ENSCING00000007255	-	99	40.060	Ciona_intestinalis
ENSSLDG00000003462	si:dkey-10o6.2	98	32.919	ENSCING00000012500	-	97	32.919	Ciona_intestinalis
ENSSLDG00000003462	si:dkey-10o6.2	90	35.986	ENSCSAVG00000000201	-	92	33.566	Ciona_savignyi
ENSSLDG00000003462	si:dkey-10o6.2	50	38.554	ENSCSAVG00000001775	-	97	38.554	Ciona_savignyi
ENSSLDG00000003462	si:dkey-10o6.2	77	37.247	ENSCSAVG00000001337	-	99	37.247	Ciona_savignyi
ENSSLDG00000003462	si:dkey-10o6.2	98	36.795	ENSCSAVG00000004616	-	98	36.795	Ciona_savignyi
ENSSLDG00000003462	si:dkey-10o6.2	100	68.167	ENSCSEG00000000918	si:dkey-10o6.2	99	68.167	Cynoglossus_semilaevis
ENSSLDG00000003462	si:dkey-10o6.2	100	70.740	ENSCSEG00000000927	si:dkey-10o6.2	100	70.740	Cynoglossus_semilaevis
ENSSLDG00000003462	si:dkey-10o6.2	100	78.457	ENSCVAG00000015074	si:dkey-10o6.2	100	78.457	Cyprinodon_variegatus
ENSSLDG00000003462	si:dkey-10o6.2	99	67.314	ENSDARG00000074628	si:dkey-10o6.2	88	67.314	Danio_rerio
ENSSLDG00000003462	si:dkey-10o6.2	99	31.889	FBgn0053099	CG33099	94	31.889	Drosophila_melanogaster
ENSSLDG00000003462	si:dkey-10o6.2	92	32.990	FBgn0053093	CG33093	86	32.990	Drosophila_melanogaster
ENSSLDG00000003462	si:dkey-10o6.2	99	74.277	ENSELUG00000003488	si:dkey-10o6.2	99	74.277	Esox_lucius
ENSSLDG00000003462	si:dkey-10o6.2	100	75.884	ENSFHEG00000019035	si:dkey-10o6.2	100	75.884	Fundulus_heteroclitus
ENSSLDG00000003462	si:dkey-10o6.2	97	69.079	ENSGMOG00000018989	si:dkey-10o6.2	100	69.079	Gadus_morhua
ENSSLDG00000003462	si:dkey-10o6.2	100	75.241	ENSGAFG00000006137	si:dkey-10o6.2	100	75.241	Gambusia_affinis
ENSSLDG00000003462	si:dkey-10o6.2	99	73.602	ENSGACG00000006806	si:dkey-10o6.2	99	73.602	Gasterosteus_aculeatus
ENSSLDG00000003462	si:dkey-10o6.2	100	82.958	ENSHBUG00000008853	si:dkey-10o6.2	100	82.958	Haplochromis_burtoni
ENSSLDG00000003462	si:dkey-10o6.2	100	71.154	ENSHCOG00000017671	-	100	71.154	Hippocampus_comes
ENSSLDG00000003462	si:dkey-10o6.2	100	77.564	ENSHCOG00000017626	si:dkey-10o6.2	100	77.564	Hippocampus_comes
ENSSLDG00000003462	si:dkey-10o6.2	99	67.961	ENSIPUG00000018879	si:dkey-10o6.2	91	67.314	Ictalurus_punctatus
ENSSLDG00000003462	si:dkey-10o6.2	99	67.961	ENSIPUG00000018911	-	99	67.961	Ictalurus_punctatus
ENSSLDG00000003462	si:dkey-10o6.2	99	71.613	ENSKMAG00000006197	si:dkey-10o6.2	99	71.613	Kryptolebias_marmoratus
ENSSLDG00000003462	si:dkey-10o6.2	99	75.000	ENSLBEG00000003839	si:dkey-10o6.2	99	75.000	Labrus_bergylta
ENSSLDG00000003462	si:dkey-10o6.2	100	69.132	ENSLBEG00000003823	si:dkey-10o6.2	91	69.132	Labrus_bergylta
ENSSLDG00000003462	si:dkey-10o6.2	100	76.923	ENSMAMG00000023026	-	100	76.923	Mastacembelus_armatus
ENSSLDG00000003462	si:dkey-10o6.2	100	75.641	ENSMAMG00000023025	-	100	75.641	Mastacembelus_armatus
ENSSLDG00000003462	si:dkey-10o6.2	100	76.923	ENSMAMG00000023022	si:dkey-10o6.2	100	76.923	Mastacembelus_armatus
ENSSLDG00000003462	si:dkey-10o6.2	100	78.205	ENSMAMG00000023020	si:dkey-10o6.2	100	78.205	Mastacembelus_armatus
ENSSLDG00000003462	si:dkey-10o6.2	100	82.637	ENSMZEG00005012018	si:dkey-10o6.2	100	82.637	Maylandia_zebra
ENSSLDG00000003462	si:dkey-10o6.2	99	70.513	ENSMMOG00000020383	si:dkey-10o6.2	97	70.513	Mola_mola
ENSSLDG00000003462	si:dkey-10o6.2	100	76.997	ENSMALG00000011300	si:dkey-10o6.2	100	76.997	Monopterus_albus
ENSSLDG00000003462	si:dkey-10o6.2	100	76.527	ENSNBRG00000015840	si:dkey-10o6.2	100	76.527	Neolamprologus_brichardi
ENSSLDG00000003462	si:dkey-10o6.2	100	83.280	ENSONIG00000015572	si:dkey-10o6.2	100	83.280	Oreochromis_niloticus
ENSSLDG00000003462	si:dkey-10o6.2	100	68.910	ENSORLG00000001314	si:dkey-10o6.2	100	68.910	Oryzias_latipes
ENSSLDG00000003462	si:dkey-10o6.2	100	68.910	ENSORLG00020002660	si:dkey-10o6.2	100	68.910	Oryzias_latipes_hni
ENSSLDG00000003462	si:dkey-10o6.2	99	68.489	ENSOMEG00000003617	si:dkey-10o6.2	97	68.489	Oryzias_melastigma
ENSSLDG00000003462	si:dkey-10o6.2	99	66.019	ENSPKIG00000004206	si:dkey-10o6.2	80	66.019	Paramormyrops_kingsleyae
ENSSLDG00000003462	si:dkey-10o6.2	99	66.559	ENSPKIG00000024109	-	98	66.559	Paramormyrops_kingsleyae
ENSSLDG00000003462	si:dkey-10o6.2	99	66.019	ENSPKIG00000004183	si:dkey-10o6.2	86	66.019	Paramormyrops_kingsleyae
ENSSLDG00000003462	si:dkey-10o6.2	99	58.621	ENSPMGG00000021603	si:dkey-10o6.2	99	58.621	Periophthalmus_magnuspinnatus
ENSSLDG00000003462	si:dkey-10o6.2	98	72.876	ENSPFOG00000017244	si:dkey-10o6.2	97	72.876	Poecilia_formosa
ENSSLDG00000003462	si:dkey-10o6.2	99	72.727	ENSPLAG00000008037	si:dkey-10o6.2	99	72.727	Poecilia_latipinna
ENSSLDG00000003462	si:dkey-10o6.2	70	75.229	ENSPMEG00000020748	si:dkey-10o6.2	96	75.943	Poecilia_mexicana
ENSSLDG00000003462	si:dkey-10o6.2	99	69.355	ENSPREG00000005108	si:dkey-10o6.2	99	69.355	Poecilia_reticulata
ENSSLDG00000003462	si:dkey-10o6.2	100	82.637	ENSPNYG00000010698	si:dkey-10o6.2	100	82.637	Pundamilia_nyererei
ENSSLDG00000003462	si:dkey-10o6.2	99	68.051	ENSPNAG00000014123	si:dkey-10o6.2	98	68.051	Pygocentrus_nattereri
ENSSLDG00000003462	si:dkey-10o6.2	89	63.669	ENSPNAG00000014485	-	84	63.669	Pygocentrus_nattereri
ENSSLDG00000003462	si:dkey-10o6.2	97	66.887	ENSSFOG00015015345	si:dkey-10o6.2	98	66.887	Scleropages_formosus
ENSSLDG00000003462	si:dkey-10o6.2	100	81.029	ENSSMAG00000019016	si:dkey-10o6.2	100	81.029	Scophthalmus_maximus
ENSSLDG00000003462	si:dkey-10o6.2	100	99.678	ENSSDUG00000000943	si:dkey-10o6.2	100	99.678	Seriola_dumerili
ENSSLDG00000003462	si:dkey-10o6.2	99	82.143	ENSSPAG00000020962	si:dkey-10o6.2	99	82.143	Stegastes_partitus
ENSSLDG00000003462	si:dkey-10o6.2	99	66.343	ENSTRUG00000019532	si:dkey-10o6.2	99	66.343	Takifugu_rubripes
ENSSLDG00000003462	si:dkey-10o6.2	100	72.115	ENSXCOG00000000855	si:dkey-10o6.2	100	72.115	Xiphophorus_couchianus
ENSSLDG00000003462	si:dkey-10o6.2	100	73.955	ENSXMAG00000012432	si:dkey-10o6.2	100	73.955	Xiphophorus_maculatus