EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000003631 (Gene tree)
Gene ID: -
Gene Symbol: si:dkey-16l2.16
Alias: -
Full Name: ras-related protein Rab-35-like
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 6405 bases
Position: chrPEQF01097943.1:154858-161262
Accession: 111651171
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000004570	MMR_HSR1	PF01926.23	3.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000004721	-	1479	XM_023401131	ENSSLDP00000004570	209 (aa)	XP_023256899	UPI000BBE79AD
ENSSLDT00000004732	-	630	-	ENSSLDP00000004581	209 (aa)	-	-

Gene Model

Click here to download ENSSLDG00000003631's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000003631's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000003631	si:dkey-16l2.16	83	33.520	ENSSLDG00000025169	rhebl1	90	33.526
ENSSLDG00000003631	si:dkey-16l2.16	78	36.310	ENSSLDG00000000773	rab9a	83	36.310
ENSSLDG00000003631	si:dkey-16l2.16	81	40.698	ENSSLDG00000022239	rab12	71	40.698
ENSSLDG00000003631	si:dkey-16l2.16	99	34.762	ENSSLDG00000015289	-	74	40.260
ENSSLDG00000003631	si:dkey-16l2.16	87	47.802	ENSSLDG00000015823	-	85	50.000
ENSSLDG00000003631	si:dkey-16l2.16	79	30.726	ENSSLDG00000003489	rasl11a	69	30.387
ENSSLDG00000003631	si:dkey-16l2.16	80	41.279	ENSSLDG00000002646	si:dkey-34d22.5	77	41.279
ENSSLDG00000003631	si:dkey-16l2.16	77	33.129	ENSSLDG00000021833	si:ch73-116o1.2	78	32.515
ENSSLDG00000003631	si:dkey-16l2.16	91	53.403	ENSSLDG00000011757	-	80	61.392
ENSSLDG00000003631	si:dkey-16l2.16	77	39.634	ENSSLDG00000003264	rab6ba	79	39.634
ENSSLDG00000003631	si:dkey-16l2.16	80	41.667	ENSSLDG00000011069	rab5aa	78	41.667
ENSSLDG00000003631	si:dkey-16l2.16	81	41.279	ENSSLDG00000010503	rab14	80	41.279
ENSSLDG00000003631	si:dkey-16l2.16	82	35.057	ENSSLDG00000012627	hrasb	89	35.673
ENSSLDG00000003631	si:dkey-16l2.16	77	40.000	ENSSLDG00000012474	rab6bb	79	38.788
ENSSLDG00000003631	si:dkey-16l2.16	61	30.303	ENSSLDG00000020097	-	70	30.303
ENSSLDG00000003631	si:dkey-16l2.16	82	42.857	ENSSLDG00000020354	rab42a	80	42.857
ENSSLDG00000003631	si:dkey-16l2.16	80	30.000	ENSSLDG00000015122	rras2	83	30.769
ENSSLDG00000003631	si:dkey-16l2.16	98	40.191	ENSSLDG00000020676	rab11bb	80	44.253
ENSSLDG00000003631	si:dkey-16l2.16	98	40.580	ENSSLDG00000006360	RAB39B	76	49.068
ENSSLDG00000003631	si:dkey-16l2.16	84	37.569	ENSSLDG00000009351	rab9b	88	37.569
ENSSLDG00000003631	si:dkey-16l2.16	55	30.172	ENSSLDG00000017576	arl3	63	30.172
ENSSLDG00000003631	si:dkey-16l2.16	72	43.421	ENSSLDG00000009725	-	74	43.421
ENSSLDG00000003631	si:dkey-16l2.16	55	31.356	ENSSLDG00000015190	arl4aa	60	31.356
ENSSLDG00000003631	si:dkey-16l2.16	83	41.714	ENSSLDG00000010880	rab25a	75	44.304
ENSSLDG00000003631	si:dkey-16l2.16	77	61.728	ENSSLDG00000018024	zgc:171927	76	61.728
ENSSLDG00000003631	si:dkey-16l2.16	96	35.323	ENSSLDG00000017771	rab5c	76	39.286
ENSSLDG00000003631	si:dkey-16l2.16	69	36.913	ENSSLDG00000014812	rab34b	73	36.913
ENSSLDG00000003631	si:dkey-16l2.16	82	44.571	ENSSLDG00000006977	rab18a	84	45.087
ENSSLDG00000003631	si:dkey-16l2.16	98	41.827	ENSSLDG00000009438	rab11a	96	40.777
ENSSLDG00000003631	si:dkey-16l2.16	74	34.161	ENSSLDG00000015143	dnajc27	59	34.161
ENSSLDG00000003631	si:dkey-16l2.16	74	44.304	ENSSLDG00000008584	rab33ba	73	44.304
ENSSLDG00000003631	si:dkey-16l2.16	98	38.942	ENSSLDG00000012116	rab11al	81	43.678
ENSSLDG00000003631	si:dkey-16l2.16	78	44.512	ENSSLDG00000005718	-	80	42.442
ENSSLDG00000003631	si:dkey-16l2.16	97	34.862	ENSSLDG00000009573	rab34a	76	37.363
ENSSLDG00000003631	si:dkey-16l2.16	99	50.725	ENSSLDG00000012251	rab1ba	80	60.625
ENSSLDG00000003631	si:dkey-16l2.16	76	45.283	ENSSLDG00000022555	rab2a	75	45.283
ENSSLDG00000003631	si:dkey-16l2.16	95	31.343	ENSSLDG00000020918	RAB17	70	33.540
ENSSLDG00000003631	si:dkey-16l2.16	75	48.101	ENSSLDG00000012091	rab25b	76	48.101
ENSSLDG00000003631	si:dkey-16l2.16	53	34.821	ENSSLDG00000014472	-	86	34.677
ENSSLDG00000003631	si:dkey-16l2.16	78	37.500	ENSSLDG00000004352	-	78	37.500
ENSSLDG00000003631	si:dkey-16l2.16	85	31.667	ENSSLDG00000017618	rasd4	80	31.765
ENSSLDG00000003631	si:dkey-16l2.16	80	39.205	ENSSLDG00000009464	rab36	65	39.205
ENSSLDG00000003631	si:dkey-16l2.16	92	45.361	ENSSLDG00000023317	rab15	82	48.276
ENSSLDG00000003631	si:dkey-16l2.16	69	50.331	ENSSLDG00000008070	-	62	50.331
ENSSLDG00000003631	si:dkey-16l2.16	77	32.919	ENSSLDG00000000287	rab23	78	33.125
ENSSLDG00000003631	si:dkey-16l2.16	73	40.506	ENSSLDG00000011597	si:dkey-13a21.4	83	38.596
ENSSLDG00000003631	si:dkey-16l2.16	77	35.802	ENSSLDG00000022168	kras	88	33.929
ENSSLDG00000003631	si:dkey-16l2.16	98	40.670	ENSSLDG00000005275	-	80	44.253
ENSSLDG00000003631	si:dkey-16l2.16	93	42.512	ENSSLDG00000021984	RAB15	82	46.552
ENSSLDG00000003631	si:dkey-16l2.16	78	39.053	ENSSLDG00000024959	-	81	39.053
ENSSLDG00000003631	si:dkey-16l2.16	73	32.258	ENSSLDG00000002757	-	73	32.258
ENSSLDG00000003631	si:dkey-16l2.16	85	47.191	ENSSLDG00000022533	rab30	88	47.191
ENSSLDG00000003631	si:dkey-16l2.16	95	35.000	ENSSLDG00000022282	rab41	73	40.260
ENSSLDG00000003631	si:dkey-16l2.16	78	47.273	ENSSLDG00000009068	-	76	48.447
ENSSLDG00000003631	si:dkey-16l2.16	98	39.713	ENSSLDG00000005221	rab11ba	80	44.253
ENSSLDG00000003631	si:dkey-16l2.16	78	39.634	ENSSLDG00000020438	rab22a	83	39.752
ENSSLDG00000003631	si:dkey-16l2.16	85	42.778	ENSSLDG00000019214	zgc:101559	73	44.118
ENSSLDG00000003631	si:dkey-16l2.16	90	43.299	ENSSLDG00000022004	rab33a	61	45.930
ENSSLDG00000003631	si:dkey-16l2.16	55	30.508	ENSSLDG00000005628	arl4d	58	30.508
ENSSLDG00000003631	si:dkey-16l2.16	82	34.091	ENSSLDG00000013333	si:cabz01085950.1	83	34.132
ENSSLDG00000003631	si:dkey-16l2.16	78	39.053	ENSSLDG00000012391	RAB7A	81	39.053
ENSSLDG00000003631	si:dkey-16l2.16	86	43.407	ENSSLDG00000006014	rab18b	80	46.951
ENSSLDG00000003631	si:dkey-16l2.16	78	36.686	ENSSLDG00000018681	rheb	88	36.686
ENSSLDG00000003631	si:dkey-16l2.16	78	60.736	ENSSLDG00000018942	rab1ab	79	61.875

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000003631	si:dkey-16l2.16	100	95.694	ENSAPOG00000008263	si:dkey-16l2.16	100	95.694	Acanthochromis_polyacanthus
ENSSLDG00000003631	si:dkey-16l2.16	100	97.129	ENSAOCG00000016825	si:dkey-16l2.16	100	97.129	Amphiprion_ocellaris
ENSSLDG00000003631	si:dkey-16l2.16	100	97.129	ENSAPEG00000006500	si:dkey-16l2.16	100	97.129	Amphiprion_percula
ENSSLDG00000003631	si:dkey-16l2.16	100	96.651	ENSATEG00000019238	si:dkey-16l2.16	100	96.651	Anabas_testudineus
ENSSLDG00000003631	si:dkey-16l2.16	100	95.694	ENSACLG00000018721	si:dkey-16l2.16	100	95.694	Astatotilapia_calliptera
ENSSLDG00000003631	si:dkey-16l2.16	100	94.737	ENSAMXG00000038243	si:dkey-16l2.16	100	94.737	Astyanax_mexicanus
ENSSLDG00000003631	si:dkey-16l2.16	56	96.610	ENSCSEG00000009988	si:dkey-16l2.16	90	96.610	Cynoglossus_semilaevis
ENSSLDG00000003631	si:dkey-16l2.16	100	96.651	ENSCVAG00000003537	si:dkey-16l2.16	100	96.651	Cyprinodon_variegatus
ENSSLDG00000003631	si:dkey-16l2.16	100	92.344	ENSDARG00000037967	si:dkey-16l2.16	99	96.610	Danio_rerio
ENSSLDG00000003631	si:dkey-16l2.16	99	87.019	ENSELUG00000023247	si:dkey-16l2.16	99	85.577	Esox_lucius
ENSSLDG00000003631	si:dkey-16l2.16	58	95.041	ENSFHEG00000000767	si:dkey-16l2.16	78	95.041	Fundulus_heteroclitus
ENSSLDG00000003631	si:dkey-16l2.16	77	84.472	ENSGMOG00000015174	si:dkey-16l2.16	98	84.472	Gadus_morhua
ENSSLDG00000003631	si:dkey-16l2.16	100	90.431	ENSGAFG00000005388	si:dkey-16l2.16	100	90.431	Gambusia_affinis
ENSSLDG00000003631	si:dkey-16l2.16	100	94.737	ENSGACG00000014915	si:dkey-16l2.16	98	94.737	Gasterosteus_aculeatus
ENSSLDG00000003631	si:dkey-16l2.16	100	96.172	ENSHBUG00000019261	si:dkey-16l2.16	100	96.172	Haplochromis_burtoni
ENSSLDG00000003631	si:dkey-16l2.16	100	94.737	ENSHCOG00000006538	si:dkey-16l2.16	100	94.737	Hippocampus_comes
ENSSLDG00000003631	si:dkey-16l2.16	100	92.823	ENSKMAG00000003494	si:dkey-16l2.16	100	92.823	Kryptolebias_marmoratus
ENSSLDG00000003631	si:dkey-16l2.16	100	97.129	ENSLBEG00000007681	si:dkey-16l2.16	100	97.129	Labrus_bergylta
ENSSLDG00000003631	si:dkey-16l2.16	100	97.608	ENSMAMG00000019230	si:dkey-16l2.16	100	97.608	Mastacembelus_armatus
ENSSLDG00000003631	si:dkey-16l2.16	100	95.694	ENSMZEG00005002081	si:dkey-16l2.16	100	95.694	Maylandia_zebra
ENSSLDG00000003631	si:dkey-16l2.16	99	97.087	ENSMMOG00000020140	si:dkey-16l2.16	97	97.087	Mola_mola
ENSSLDG00000003631	si:dkey-16l2.16	100	95.215	ENSMALG00000014727	si:dkey-16l2.16	99	95.215	Monopterus_albus
ENSSLDG00000003631	si:dkey-16l2.16	100	95.694	ENSNBRG00000008930	si:dkey-16l2.16	100	95.694	Neolamprologus_brichardi
ENSSLDG00000003631	si:dkey-16l2.16	100	95.694	ENSONIG00000009443	si:dkey-16l2.16	100	95.694	Oreochromis_niloticus
ENSSLDG00000003631	si:dkey-16l2.16	100	89.952	ENSORLG00000001098	si:dkey-16l2.16	99	89.952	Oryzias_latipes
ENSSLDG00000003631	si:dkey-16l2.16	100	89.952	ENSORLG00020000867	si:dkey-16l2.16	99	89.952	Oryzias_latipes_hni
ENSSLDG00000003631	si:dkey-16l2.16	100	88.038	ENSOMEG00000015474	si:dkey-16l2.16	100	88.038	Oryzias_melastigma
ENSSLDG00000003631	si:dkey-16l2.16	100	79.426	ENSPKIG00000018888	si:dkey-16l2.16	94	82.143	Paramormyrops_kingsleyae
ENSSLDG00000003631	si:dkey-16l2.16	100	93.301	ENSPKIG00000005686	-	100	93.301	Paramormyrops_kingsleyae
ENSSLDG00000003631	si:dkey-16l2.16	100	94.737	ENSPMGG00000000751	si:dkey-16l2.16	100	94.737	Periophthalmus_magnuspinnatus
ENSSLDG00000003631	si:dkey-16l2.16	100	90.431	ENSPFOG00000004746	si:dkey-16l2.16	100	90.431	Poecilia_formosa
ENSSLDG00000003631	si:dkey-16l2.16	100	89.952	ENSPLAG00000021043	si:dkey-16l2.16	100	89.952	Poecilia_latipinna
ENSSLDG00000003631	si:dkey-16l2.16	100	90.431	ENSPMEG00000007165	si:dkey-16l2.16	100	90.431	Poecilia_mexicana
ENSSLDG00000003631	si:dkey-16l2.16	100	89.952	ENSPREG00000005323	si:dkey-16l2.16	100	89.952	Poecilia_reticulata
ENSSLDG00000003631	si:dkey-16l2.16	100	96.172	ENSPNYG00000009490	si:dkey-16l2.16	100	96.172	Pundamilia_nyererei
ENSSLDG00000003631	si:dkey-16l2.16	100	94.258	ENSPNAG00000018986	si:dkey-16l2.16	100	94.258	Pygocentrus_nattereri
ENSSLDG00000003631	si:dkey-16l2.16	100	92.344	ENSSFOG00015021448	-	100	92.344	Scleropages_formosus
ENSSLDG00000003631	si:dkey-16l2.16	99	80.288	ENSSFOG00015006414	-	85	83.616	Scleropages_formosus
ENSSLDG00000003631	si:dkey-16l2.16	100	92.344	ENSSMAG00000011769	si:dkey-16l2.16	94	92.344	Scophthalmus_maximus
ENSSLDG00000003631	si:dkey-16l2.16	100	100.000	ENSSDUG00000005719	si:dkey-16l2.16	100	100.000	Seriola_dumerili
ENSSLDG00000003631	si:dkey-16l2.16	100	97.608	ENSSPAG00000006302	si:dkey-16l2.16	100	97.608	Stegastes_partitus
ENSSLDG00000003631	si:dkey-16l2.16	100	96.172	ENSTRUG00000025076	si:dkey-16l2.16	100	96.172	Takifugu_rubripes
ENSSLDG00000003631	si:dkey-16l2.16	100	95.694	ENSTNIG00000011300	si:dkey-16l2.16	100	95.694	Tetraodon_nigroviridis
ENSSLDG00000003631	si:dkey-16l2.16	100	90.909	ENSXMAG00000021767	si:dkey-16l2.16	100	90.909	Xiphophorus_maculatus