EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000003659 (Gene tree)
Gene ID: -
Gene Symbol: sbds
Alias: zgc:56700
Full Name: SBDS%2C ribosome maturation factor
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 2237 bases
Position: chrPEQF01099039.1:837813-840049
Accession: 111662213
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000004611	SBDS	PF01172.18	3.1e-34	1	1
ENSSLDP00000004611	SBDS_C	PF09377.10	2.3e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000004763	-	846	XM_023416005	ENSSLDP00000004611	249 (aa)	XP_023271773	UPI000C6F9ECE

Gene Model

Click here to download ENSSLDG00000003659's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000003659's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000003659	sbds	100	83.133	ENSG00000126524	SBDS	97	89.157	Homo_sapiens
ENSSLDG00000003659	sbds	100	95.984	ENSAPOG00000014285	sbds	100	95.984	Acanthochromis_polyacanthus
ENSSLDG00000003659	sbds	100	83.133	ENSAMEG00000018167	SBDS	99	83.133	Ailuropoda_melanoleuca
ENSSLDG00000003659	sbds	100	94.841	ENSACIG00000007308	sbds	100	94.841	Amphilophus_citrinellus
ENSSLDG00000003659	sbds	100	95.984	ENSAOCG00000016770	sbds	100	95.984	Amphiprion_ocellaris
ENSSLDG00000003659	sbds	100	96.386	ENSAPEG00000015897	sbds	100	96.386	Amphiprion_percula
ENSSLDG00000003659	sbds	100	95.582	ENSATEG00000006901	sbds	100	95.582	Anabas_testudineus
ENSSLDG00000003659	sbds	83	82.039	ENSANAG00000037501	-	99	82.039	Aotus_nancymaae
ENSSLDG00000003659	sbds	93	77.056	ENSANAG00000024342	-	95	79.518	Aotus_nancymaae
ENSSLDG00000003659	sbds	100	95.984	ENSACLG00000018750	sbds	100	95.984	Astatotilapia_calliptera
ENSSLDG00000003659	sbds	100	89.558	ENSAMXG00000005361	sbds	99	89.558	Astyanax_mexicanus
ENSSLDG00000003659	sbds	100	83.133	ENSBTAG00000004051	SBDS	99	83.133	Bos_taurus
ENSSLDG00000003659	sbds	98	57.724	WBGene00021063	sbds-1	97	57.724	Caenorhabditis_elegans
ENSSLDG00000003659	sbds	100	83.133	ENSCJAG00000041007	SBDS	99	83.133	Callithrix_jacchus
ENSSLDG00000003659	sbds	100	81.275	ENSCAFG00000010797	SBDS	99	81.275	Canis_familiaris
ENSSLDG00000003659	sbds	100	83.133	ENSCAFG00020005357	SBDS	99	83.133	Canis_lupus_dingo
ENSSLDG00000003659	sbds	100	83.133	ENSCHIG00000026854	SBDS	99	83.133	Capra_hircus
ENSSLDG00000003659	sbds	100	83.133	ENSTSYG00000033822	SBDS	99	83.133	Carlito_syrichta
ENSSLDG00000003659	sbds	65	80.982	ENSCAPG00000006634	SBDS	99	80.982	Cavia_aperea
ENSSLDG00000003659	sbds	100	83.936	ENSCPOG00000036143	SBDS	99	83.936	Cavia_porcellus
ENSSLDG00000003659	sbds	100	82.731	ENSCCAG00000020671	SBDS	93	89.157	Cebus_capucinus
ENSSLDG00000003659	sbds	100	83.133	ENSCATG00000039026	SBDS	99	83.133	Cercocebus_atys
ENSSLDG00000003659	sbds	99	58.468	ENSCLAG00000002113	-	99	58.468	Chinchilla_lanigera
ENSSLDG00000003659	sbds	100	84.337	ENSCLAG00000005721	-	99	84.337	Chinchilla_lanigera
ENSSLDG00000003659	sbds	100	83.133	ENSCSAG00000018275	SBDS	99	83.133	Chlorocebus_sabaeus
ENSSLDG00000003659	sbds	100	78.313	ENSCHOG00000003795	SBDS	99	78.313	Choloepus_hoffmanni
ENSSLDG00000003659	sbds	100	85.542	ENSCPBG00000014893	SBDS	99	85.542	Chrysemys_picta_bellii
ENSSLDG00000003659	sbds	99	66.129	ENSCSAVG00000011811	-	99	66.129	Ciona_savignyi
ENSSLDG00000003659	sbds	100	82.731	ENSCANG00000032368	SBDS	99	82.731	Colobus_angolensis_palliatus
ENSSLDG00000003659	sbds	65	80.982	ENSCGRG00001019886	Sbds	99	80.982	Cricetulus_griseus_chok1gshd
ENSSLDG00000003659	sbds	83	83.010	ENSCGRG00000009211	Sbds	99	83.010	Cricetulus_griseus_crigri
ENSSLDG00000003659	sbds	100	93.976	ENSCSEG00000005798	sbds	100	93.976	Cynoglossus_semilaevis
ENSSLDG00000003659	sbds	100	92.369	ENSCVAG00000001053	sbds	100	92.369	Cyprinodon_variegatus
ENSSLDG00000003659	sbds	100	89.157	ENSDARG00000027803	sbds	99	89.157	Danio_rerio
ENSSLDG00000003659	sbds	100	83.133	ENSDNOG00000041174	SBDS	99	83.133	Dasypus_novemcinctus
ENSSLDG00000003659	sbds	100	85.141	ENSDORG00000026218	Sbds	99	85.141	Dipodomys_ordii
ENSSLDG00000003659	sbds	91	62.281	FBgn0035714	CG8549	98	61.538	Drosophila_melanogaster
ENSSLDG00000003659	sbds	93	58.190	ENSEBUG00000015780	sbds	99	58.190	Eptatretus_burgeri
ENSSLDG00000003659	sbds	100	83.133	ENSEASG00005008821	SBDS	99	83.133	Equus_asinus_asinus
ENSSLDG00000003659	sbds	100	83.133	ENSECAG00000008202	SBDS	99	83.133	Equus_caballus
ENSSLDG00000003659	sbds	84	63.462	ENSEEUG00000004768	SBDS	100	63.462	Erinaceus_europaeus
ENSSLDG00000003659	sbds	100	89.960	ENSELUG00000008382	sbds	99	89.960	Esox_lucius
ENSSLDG00000003659	sbds	100	83.133	ENSFCAG00000022142	SBDS	99	83.133	Felis_catus
ENSSLDG00000003659	sbds	100	86.345	ENSFALG00000013808	SBDS	99	86.345	Ficedula_albicollis
ENSSLDG00000003659	sbds	100	83.936	ENSFDAG00000018947	-	99	83.936	Fukomys_damarensis
ENSSLDG00000003659	sbds	100	89.558	ENSFHEG00000000708	sbds	100	89.558	Fundulus_heteroclitus
ENSSLDG00000003659	sbds	100	89.558	ENSGMOG00000018356	sbds	99	89.558	Gadus_morhua
ENSSLDG00000003659	sbds	100	83.936	ENSGALG00000027989	SBDS	99	83.936	Gallus_gallus
ENSSLDG00000003659	sbds	92	90.000	ENSGAFG00000014204	sbds	100	90.000	Gambusia_affinis
ENSSLDG00000003659	sbds	100	90.763	ENSGACG00000012697	sbds	100	90.763	Gasterosteus_aculeatus
ENSSLDG00000003659	sbds	86	85.915	ENSGAGG00000022402	SBDS	99	85.915	Gopherus_agassizii
ENSSLDG00000003659	sbds	96	64.167	ENSGGOG00000040023	-	92	64.167	Gorilla_gorilla
ENSSLDG00000003659	sbds	100	95.984	ENSHBUG00000002660	sbds	100	95.984	Haplochromis_burtoni
ENSSLDG00000003659	sbds	100	82.329	ENSHGLG00000009671	SBDS	99	82.329	Heterocephalus_glaber_female
ENSSLDG00000003659	sbds	100	82.329	ENSHGLG00100011332	SBDS	99	82.329	Heterocephalus_glaber_male
ENSSLDG00000003659	sbds	100	89.960	ENSHCOG00000018606	sbds	100	89.960	Hippocampus_comes
ENSSLDG00000003659	sbds	100	88.353	ENSIPUG00000006536	sbds	99	88.353	Ictalurus_punctatus
ENSSLDG00000003659	sbds	100	59.921	ENSJJAG00000003934	-	99	60.400	Jaculus_jaculus
ENSSLDG00000003659	sbds	99	81.377	ENSJJAG00000012033	-	99	81.377	Jaculus_jaculus
ENSSLDG00000003659	sbds	100	94.378	ENSKMAG00000018542	sbds	100	94.378	Kryptolebias_marmoratus
ENSSLDG00000003659	sbds	100	91.165	ENSLBEG00000016687	sbds	100	91.165	Labrus_bergylta
ENSSLDG00000003659	sbds	100	73.123	ENSLACG00000018916	SBDS	99	73.123	Latimeria_chalumnae
ENSSLDG00000003659	sbds	100	89.157	ENSLOCG00000004073	sbds	99	89.157	Lepisosteus_oculatus
ENSSLDG00000003659	sbds	100	83.534	ENSLAFG00000008763	SBDS	99	83.534	Loxodonta_africana
ENSSLDG00000003659	sbds	100	83.133	ENSMFAG00000032620	SBDS	99	83.133	Macaca_fascicularis
ENSSLDG00000003659	sbds	100	83.133	ENSMMUG00000045653	SBDS	99	83.133	Macaca_mulatta
ENSSLDG00000003659	sbds	100	83.133	ENSMNEG00000031523	SBDS	99	83.133	Macaca_nemestrina
ENSSLDG00000003659	sbds	100	67.194	ENSMLEG00000036826	SBDS	99	67.194	Mandrillus_leucophaeus
ENSSLDG00000003659	sbds	100	95.984	ENSMAMG00000016062	sbds	100	95.984	Mastacembelus_armatus
ENSSLDG00000003659	sbds	100	95.984	ENSMZEG00005024385	sbds	100	95.984	Maylandia_zebra
ENSSLDG00000003659	sbds	100	83.936	ENSMGAG00000002119	SBDS	99	83.936	Meleagris_gallopavo
ENSSLDG00000003659	sbds	100	68.273	ENSMAUG00000022214	-	100	68.273	Mesocricetus_auratus
ENSSLDG00000003659	sbds	100	83.133	ENSMICG00000014366	SBDS	99	83.133	Microcebus_murinus
ENSSLDG00000003659	sbds	100	83.534	ENSMOCG00000011739	Sbds	99	83.534	Microtus_ochrogaster
ENSSLDG00000003659	sbds	100	84.800	ENSMMOG00000005061	sbds	100	84.800	Mola_mola
ENSSLDG00000003659	sbds	100	84.337	ENSMODG00000006644	SBDS	99	84.337	Monodelphis_domestica
ENSSLDG00000003659	sbds	100	91.968	ENSMALG00000010219	sbds	100	91.968	Monopterus_albus
ENSSLDG00000003659	sbds	100	84.337	MGP_CAROLIEiJ_G0027800	Sbds	98	92.857	Mus_caroli
ENSSLDG00000003659	sbds	100	84.739	ENSMUSG00000025337	Sbds	98	92.857	Mus_musculus
ENSSLDG00000003659	sbds	100	84.337	MGP_PahariEiJ_G0024384	Sbds	98	92.857	Mus_pahari
ENSSLDG00000003659	sbds	100	84.739	MGP_SPRETEiJ_G0028798	Sbds	98	92.857	Mus_spretus
ENSSLDG00000003659	sbds	67	83.234	ENSMPUG00000016192	SBDS	96	83.234	Mustela_putorius_furo
ENSSLDG00000003659	sbds	73	78.453	ENSMLUG00000013575	SBDS	99	78.453	Myotis_lucifugus
ENSSLDG00000003659	sbds	100	84.337	ENSNGAG00000012093	Sbds	99	84.337	Nannospalax_galili
ENSSLDG00000003659	sbds	100	95.984	ENSNBRG00000017027	sbds	100	95.984	Neolamprologus_brichardi
ENSSLDG00000003659	sbds	100	83.133	ENSNLEG00000013288	SBDS	99	83.133	Nomascus_leucogenys
ENSSLDG00000003659	sbds	100	84.337	ENSOPRG00000008721	SBDS	99	84.337	Ochotona_princeps
ENSSLDG00000003659	sbds	100	63.855	ENSODEG00000000137	-	84	66.667	Octodon_degus
ENSSLDG00000003659	sbds	100	66.265	ENSODEG00000001116	-	99	66.265	Octodon_degus
ENSSLDG00000003659	sbds	100	76.305	ENSODEG00000019253	-	84	76.305	Octodon_degus
ENSSLDG00000003659	sbds	100	95.984	ENSONIG00000005874	sbds	100	95.984	Oreochromis_niloticus
ENSSLDG00000003659	sbds	82	82.843	ENSOANG00000007674	-	99	82.843	Ornithorhynchus_anatinus
ENSSLDG00000003659	sbds	100	85.141	ENSOCUG00000003170	SBDS	99	85.141	Oryctolagus_cuniculus
ENSSLDG00000003659	sbds	100	91.165	ENSORLG00000023489	sbds	100	91.165	Oryzias_latipes
ENSSLDG00000003659	sbds	100	90.763	ENSORLG00020019282	sbds	100	90.763	Oryzias_latipes_hni
ENSSLDG00000003659	sbds	100	90.763	ENSORLG00015008005	sbds	100	90.763	Oryzias_latipes_hsok
ENSSLDG00000003659	sbds	100	91.566	ENSOMEG00000022747	sbds	100	91.566	Oryzias_melastigma
ENSSLDG00000003659	sbds	100	83.534	ENSOGAG00000009011	-	99	83.534	Otolemur_garnettii
ENSSLDG00000003659	sbds	100	71.888	ENSOGAG00000015036	-	99	71.888	Otolemur_garnettii
ENSSLDG00000003659	sbds	100	83.133	ENSOARG00000010609	SBDS	99	83.133	Ovis_aries
ENSSLDG00000003659	sbds	100	82.329	ENSPPAG00000043889	-	99	82.329	Pan_paniscus
ENSSLDG00000003659	sbds	100	83.133	ENSPPRG00000002307	SBDS	99	83.133	Panthera_pardus
ENSSLDG00000003659	sbds	100	83.133	ENSPTIG00000021308	SBDS	99	83.133	Panthera_tigris_altaica
ENSSLDG00000003659	sbds	87	81.106	ENSPTRG00000048174	-	96	81.106	Pan_troglodytes
ENSSLDG00000003659	sbds	100	83.133	ENSPTRG00000019254	SBDS	99	83.133	Pan_troglodytes
ENSSLDG00000003659	sbds	100	69.478	ENSPTRG00000050835	-	99	69.478	Pan_troglodytes
ENSSLDG00000003659	sbds	100	69.478	ENSPTRG00000047744	-	99	69.478	Pan_troglodytes
ENSSLDG00000003659	sbds	100	83.133	ENSPANG00000004078	SBDS	99	83.133	Papio_anubis
ENSSLDG00000003659	sbds	100	91.165	ENSPKIG00000006489	sbds	99	91.165	Paramormyrops_kingsleyae
ENSSLDG00000003659	sbds	83	83.575	ENSPSIG00000014603	SBDS	99	83.575	Pelodiscus_sinensis
ENSSLDG00000003659	sbds	100	95.582	ENSPMGG00000004246	sbds	100	95.582	Periophthalmus_magnuspinnatus
ENSSLDG00000003659	sbds	100	84.337	ENSPEMG00000008728	Sbds	99	84.337	Peromyscus_maniculatus_bairdii
ENSSLDG00000003659	sbds	100	84.739	ENSPCIG00000029718	SBDS	99	84.739	Phascolarctos_cinereus
ENSSLDG00000003659	sbds	100	92.369	ENSPFOG00000015837	sbds	100	92.369	Poecilia_formosa
ENSSLDG00000003659	sbds	100	92.771	ENSPLAG00000003641	sbds	100	92.771	Poecilia_latipinna
ENSSLDG00000003659	sbds	100	92.369	ENSPMEG00000019483	sbds	100	92.369	Poecilia_mexicana
ENSSLDG00000003659	sbds	100	92.369	ENSPREG00000018758	sbds	100	92.369	Poecilia_reticulata
ENSSLDG00000003659	sbds	100	83.133	ENSPPYG00000017513	SBDS	99	83.133	Pongo_abelii
ENSSLDG00000003659	sbds	100	82.731	ENSPCOG00000021098	SBDS	99	82.731	Propithecus_coquereli
ENSSLDG00000003659	sbds	100	83.534	ENSPVAG00000009369	SBDS	99	83.534	Pteropus_vampyrus
ENSSLDG00000003659	sbds	100	95.582	ENSPNYG00000022403	sbds	100	95.582	Pundamilia_nyererei
ENSSLDG00000003659	sbds	100	91.165	ENSPNAG00000001120	sbds	99	91.165	Pygocentrus_nattereri
ENSSLDG00000003659	sbds	100	84.337	ENSRNOG00000000888	Sbds	99	84.337	Rattus_norvegicus
ENSSLDG00000003659	sbds	100	83.133	ENSRBIG00000035557	SBDS	99	83.133	Rhinopithecus_bieti
ENSSLDG00000003659	sbds	100	68.273	ENSRROG00000041986	-	99	68.273	Rhinopithecus_roxellana
ENSSLDG00000003659	sbds	100	83.133	ENSRROG00000040842	-	99	83.133	Rhinopithecus_roxellana
ENSSLDG00000003659	sbds	96	42.276	YLR022C	-	96	42.276	Saccharomyces_cerevisiae
ENSSLDG00000003659	sbds	93	81.385	ENSSBOG00000022460	SBDS	99	81.385	Saimiri_boliviensis_boliviensis
ENSSLDG00000003659	sbds	100	72.289	ENSSHAG00000010263	SBDS	99	72.289	Sarcophilus_harrisii
ENSSLDG00000003659	sbds	100	91.165	ENSSFOG00015001108	sbds	99	91.165	Scleropages_formosus
ENSSLDG00000003659	sbds	100	95.181	ENSSMAG00000020506	sbds	100	95.181	Scophthalmus_maximus
ENSSLDG00000003659	sbds	100	99.598	ENSSDUG00000001528	sbds	100	99.598	Seriola_dumerili
ENSSLDG00000003659	sbds	73	90.698	ENSSARG00000001899	-	73	90.698	Sorex_araneus
ENSSLDG00000003659	sbds	61	88.889	ENSSARG00000013132	-	100	88.889	Sorex_araneus
ENSSLDG00000003659	sbds	100	82.731	ENSSPUG00000002699	SBDS	99	82.731	Sphenodon_punctatus
ENSSLDG00000003659	sbds	100	97.189	ENSSPAG00000016419	sbds	100	89.200	Stegastes_partitus
ENSSLDG00000003659	sbds	100	83.133	ENSSSCG00000007732	SBDS	99	83.133	Sus_scrofa
ENSSLDG00000003659	sbds	66	85.976	ENSTGUG00000003426	SBDS	99	85.976	Taeniopygia_guttata
ENSSLDG00000003659	sbds	100	95.582	ENSTRUG00000021443	sbds	100	95.582	Takifugu_rubripes
ENSSLDG00000003659	sbds	100	94.779	ENSTNIG00000019000	sbds	100	94.779	Tetraodon_nigroviridis
ENSSLDG00000003659	sbds	84	71.154	ENSTBEG00000001178	SBDS	100	71.154	Tupaia_belangeri
ENSSLDG00000003659	sbds	100	65.462	ENSTTRG00000003921	SBDS	99	65.462	Tursiops_truncatus
ENSSLDG00000003659	sbds	100	83.133	ENSUAMG00000001326	SBDS	99	83.133	Ursus_americanus
ENSSLDG00000003659	sbds	100	83.133	ENSUMAG00000015353	SBDS	99	83.133	Ursus_maritimus
ENSSLDG00000003659	sbds	100	83.133	ENSVVUG00000016478	SBDS	99	83.133	Vulpes_vulpes
ENSSLDG00000003659	sbds	100	85.141	ENSXETG00000010093	sbds	99	85.141	Xenopus_tropicalis
ENSSLDG00000003659	sbds	100	82.329	ENSXCOG00000010639	sbds	100	82.329	Xiphophorus_couchianus
ENSSLDG00000003659	sbds	100	92.771	ENSXMAG00000006065	sbds	100	92.771	Xiphophorus_maculatus