EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000003718 (Gene tree)
Gene ID: -
Gene Symbol: hnrnpa1a
Alias: zgc:66127
Full Name: heterogeneous nuclear ribonucleoprotein A1a
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 3995 bases
Position: chrPEQF01099246.1:2733554-2737548
Accession: ZDB-GENE-040426-1546
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000004832	RRM_1	PF00076.22	1e-36	1	2
ENSSLDP00000004832	RRM_1	PF00076.22	1e-36	2	2
ENSSLDP00000004743	RRM_1	PF00076.22	1.1e-36	1	2
ENSSLDP00000004743	RRM_1	PF00076.22	1.1e-36	2	2
ENSSLDP00000004784	RRM_1	PF00076.22	6e-36	1	2
ENSSLDP00000004784	RRM_1	PF00076.22	6e-36	2	2
ENSSLDP00000004811	RRM_1	PF00076.22	6.6e-34	1	2
ENSSLDP00000004811	RRM_1	PF00076.22	6.6e-34	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000004900	-	759	-	ENSSLDP00000004743	252 (aa)	-	-
ENSSLDT00000004969	-	633	-	ENSSLDP00000004811	210 (aa)	-	-
ENSSLDT00000004942	-	807	-	ENSSLDP00000004784	268 (aa)	-	-
ENSSLDT00000004990	-	732	-	ENSSLDP00000004832	243 (aa)	-	-

Gene Model

Click here to download ENSSLDG00000003718's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000003718's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000003718	hnrnpa1a	82	34.286	ENSSLDG00000000280	tardbpl	81	34.667
ENSSLDG00000003718	hnrnpa1a	80	38.690	ENSSLDG00000016832	MSI1	55	42.073
ENSSLDG00000003718	hnrnpa1a	87	50.237	ENSSLDG00000024705	-	89	50.481
ENSSLDG00000003718	hnrnpa1a	79	38.182	ENSSLDG00000018706	-	52	38.182
ENSSLDG00000003718	hnrnpa1a	79	40.260	ENSSLDG00000005199	hnrnpaba	57	40.260
ENSSLDG00000003718	hnrnpa1a	77	41.558	ENSSLDG00000001911	-	63	41.558
ENSSLDG00000003718	hnrnpa1a	77	59.155	ENSSLDG00000024685	-	86	59.477
ENSSLDG00000003718	hnrnpa1a	81	82.530	ENSSLDG00000018999	HNRNPA3	56	85.256
ENSSLDG00000003718	hnrnpa1a	86	38.389	ENSSLDG00000015962	hnrnpd	58	39.894
ENSSLDG00000003718	hnrnpa1a	80	40.506	ENSSLDG00000017172	msi2a	56	42.282

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000003718	hnrnpa1a	93	88.106	ENSAPOG00000019369	-	89	96.739	Acanthochromis_polyacanthus
ENSSLDG00000003718	hnrnpa1a	79	54.819	ENSACIG00000021815	-	90	55.435	Amphilophus_citrinellus
ENSSLDG00000003718	hnrnpa1a	93	88.106	ENSAOCG00000005289	-	89	96.739	Amphiprion_ocellaris
ENSSLDG00000003718	hnrnpa1a	93	88.106	ENSAPEG00000004179	-	89	96.739	Amphiprion_percula
ENSSLDG00000003718	hnrnpa1a	77	58.904	ENSATEG00000003423	-	75	59.119	Anabas_testudineus
ENSSLDG00000003718	hnrnpa1a	82	98.266	ENSATEG00000022918	hnrnpa1a	93	95.455	Anabas_testudineus
ENSSLDG00000003718	hnrnpa1a	80	54.878	ENSACAG00000017109	-	80	45.594	Anolis_carolinensis
ENSSLDG00000003718	hnrnpa1a	94	87.879	ENSACLG00000006940	-	89	97.826	Astatotilapia_calliptera
ENSSLDG00000003718	hnrnpa1a	80	84.615	ENSAMXG00000006296	hnrnpa1a	51	84.293	Astyanax_mexicanus
ENSSLDG00000003718	hnrnpa1a	91	57.522	ENSAMXG00000037730	-	66	54.978	Astyanax_mexicanus
ENSSLDG00000003718	hnrnpa1a	93	83.260	ENSCSEG00000007589	hnrnpa1a	89	91.304	Cynoglossus_semilaevis
ENSSLDG00000003718	hnrnpa1a	77	54.037	ENSCSEG00000014051	-	73	54.140	Cynoglossus_semilaevis
ENSSLDG00000003718	hnrnpa1a	95	86.087	ENSCVAG00000012637	hnrnpa1a	89	76.680	Cyprinodon_variegatus
ENSSLDG00000003718	hnrnpa1a	80	81.065	ENSDARG00000011020	hnrnpa1a	71	72.065	Danio_rerio
ENSSLDG00000003718	hnrnpa1a	86	53.889	ENSDORG00000026425	-	68	51.477	Dipodomys_ordii
ENSSLDG00000003718	hnrnpa1a	82	90.751	ENSELUG00000007372	-	72	91.257	Esox_lucius
ENSSLDG00000003718	hnrnpa1a	80	86.391	ENSGMOG00000017950	hnrnpa1a	50	87.027	Gadus_morhua
ENSSLDG00000003718	hnrnpa1a	79	61.446	ENSGMOG00000020353	-	97	61.497	Gadus_morhua
ENSSLDG00000003718	hnrnpa1a	94	89.340	ENSGAFG00000007751	-	89	98.361	Gambusia_affinis
ENSSLDG00000003718	hnrnpa1a	79	53.939	ENSGAFG00000016803	-	55	54.054	Gambusia_affinis
ENSSLDG00000003718	hnrnpa1a	89	86.175	ENSGACG00000009435	-	87	90.385	Gasterosteus_aculeatus
ENSSLDG00000003718	hnrnpa1a	94	87.879	ENSHBUG00000005647	hnrnpa1a	89	71.477	Haplochromis_burtoni
ENSSLDG00000003718	hnrnpa1a	79	62.048	ENSIPUG00000001991	-	80	61.702	Ictalurus_punctatus
ENSSLDG00000003718	hnrnpa1a	80	87.943	ENSIPUG00000002023	hnrnpa1a	75	88.235	Ictalurus_punctatus
ENSSLDG00000003718	hnrnpa1a	82	83.815	ENSIPUG00000022440	-	74	83.815	Ictalurus_punctatus
ENSSLDG00000003718	hnrnpa1a	93	88.444	ENSKMAG00000020859	-	88	97.814	Kryptolebias_marmoratus
ENSSLDG00000003718	hnrnpa1a	95	86.266	ENSLBEG00000010010	hnrnpa1a	89	97.283	Labrus_bergylta
ENSSLDG00000003718	hnrnpa1a	80	69.231	ENSMFAG00000028351	-	57	70.769	Macaca_fascicularis
ENSSLDG00000003718	hnrnpa1a	98	98.742	ENSMAMG00000007606	-	90	96.429	Mastacembelus_armatus
ENSSLDG00000003718	hnrnpa1a	94	87.879	ENSMZEG00005027173	hnrnpa1a	89	71.477	Maylandia_zebra
ENSSLDG00000003718	hnrnpa1a	99	93.750	ENSMMOG00000008251	hnrnpa1a	99	93.750	Mola_mola
ENSSLDG00000003718	hnrnpa1a	79	55.152	ENSMALG00000008886	-	88	55.249	Monopterus_albus
ENSSLDG00000003718	hnrnpa1a	93	89.333	ENSMALG00000014091	hnrnpa1a	89	96.429	Monopterus_albus
ENSSLDG00000003718	hnrnpa1a	83	56.250	ENSNBRG00000014469	-	84	58.333	Neolamprologus_brichardi
ENSSLDG00000003718	hnrnpa1a	94	87.879	ENSNBRG00000018441	-	89	97.826	Neolamprologus_brichardi
ENSSLDG00000003718	hnrnpa1a	85	96.257	ENSORLG00000008001	-	89	97.283	Oryzias_latipes
ENSSLDG00000003718	hnrnpa1a	93	46.667	ENSORLG00000029240	-	99	51.724	Oryzias_latipes
ENSSLDG00000003718	hnrnpa1a	92	48.872	ENSORLG00020022498	-	81	51.429	Oryzias_latipes_hni
ENSSLDG00000003718	hnrnpa1a	85	96.257	ENSORLG00020006582	hnrnpa1a	89	97.283	Oryzias_latipes_hni
ENSSLDG00000003718	hnrnpa1a	92	38.655	ENSORLG00020006043	-	60	49.697	Oryzias_latipes_hni
ENSSLDG00000003718	hnrnpa1a	88	96.791	ENSORLG00015022294	-	89	97.826	Oryzias_latipes_hsok
ENSSLDG00000003718	hnrnpa1a	86	91.981	ENSOMEG00000015959	-	89	97.826	Oryzias_melastigma
ENSSLDG00000003718	hnrnpa1a	80	55.621	ENSPMGG00000016392	-	93	57.792	Periophthalmus_magnuspinnatus
ENSSLDG00000003718	hnrnpa1a	94	86.275	ENSPMGG00000011804	hnrnpa1a	84	82.870	Periophthalmus_magnuspinnatus
ENSSLDG00000003718	hnrnpa1a	94	89.340	ENSPFOG00000001825	-	89	78.175	Poecilia_formosa
ENSSLDG00000003718	hnrnpa1a	94	89.340	ENSPMEG00000002425	-	89	78.175	Poecilia_mexicana
ENSSLDG00000003718	hnrnpa1a	83	56.250	ENSPNYG00000020729	-	92	58.333	Pundamilia_nyererei
ENSSLDG00000003718	hnrnpa1a	82	83.237	ENSPNAG00000021630	-	78	70.196	Pygocentrus_nattereri
ENSSLDG00000003718	hnrnpa1a	80	85.106	ENSPNAG00000007752	hnrnpa1a	88	74.408	Pygocentrus_nattereri
ENSSLDG00000003718	hnrnpa1a	77	58.824	ENSSMAG00000010279	-	93	59.740	Scophthalmus_maximus
ENSSLDG00000003718	hnrnpa1a	86	88.095	ENSSMAG00000004641	hnrnpa1a	89	94.022	Scophthalmus_maximus
ENSSLDG00000003718	hnrnpa1a	79	54.545	ENSSMAG00000010246	-	81	55.435	Scophthalmus_maximus
ENSSLDG00000003718	hnrnpa1a	98	99.580	ENSSDUG00000013908	hnrnpa1a	99	99.580	Seriola_dumerili
ENSSLDG00000003718	hnrnpa1a	81	56.216	ENSSDUG00000002431	-	88	56.216	Seriola_dumerili
ENSSLDG00000003718	hnrnpa1a	94	87.879	ENSSPAG00000018518	-	89	96.196	Stegastes_partitus
ENSSLDG00000003718	hnrnpa1a	94	82.915	ENSTRUG00000020491	-	90	92.935	Takifugu_rubripes
ENSSLDG00000003718	hnrnpa1a	80	60.355	ENSTNIG00000007398	-	80	59.740	Tetraodon_nigroviridis
ENSSLDG00000003718	hnrnpa1a	80	99.291	ENSXCOG00000009001	-	84	97.949	Xiphophorus_couchianus
ENSSLDG00000003718	hnrnpa1a	94	89.848	ENSXMAG00000008076	-	89	78.571	Xiphophorus_maculatus