EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000003821 (Gene tree)
Gene ID: -
Gene Symbol: swt1
Alias: si:dkeyp-11g8.2|si:dkeyp-11g8.4|wu:fb81g09
Full Name: SWT1%2C RNA endoribonuclease homolog
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 22486 bases
Position: chrPEQF01099426.1:2519678-2542163
Accession: 111645405
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000004801	PIN_4	PF13638.6	1e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000004959	-	3201	XM_023394622	ENSSLDP00000004801	961 (aa)	XP_023250390	UPI000C6F7D6C

Gene Model

Click here to download ENSSLDG00000003821's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000003821's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000003821	swt1	58	34.423	ENSG00000116668	SWT1	60	34.418	Homo_sapiens
ENSSLDG00000003821	swt1	98	64.859	ENSAPOG00000014897	-	98	64.859	Acanthochromis_polyacanthus
ENSSLDG00000003821	swt1	58	34.828	ENSAMEG00000013585	SWT1	60	34.655	Ailuropoda_melanoleuca
ENSSLDG00000003821	swt1	98	65.765	ENSAOCG00000013932	swt1	98	65.765	Amphiprion_ocellaris
ENSSLDG00000003821	swt1	98	65.765	ENSAPEG00000009613	-	98	65.765	Amphiprion_percula
ENSSLDG00000003821	swt1	98	68.025	ENSATEG00000018946	swt1	98	68.025	Anabas_testudineus
ENSSLDG00000003821	swt1	58	37.759	ENSAPLG00000008607	SWT1	74	37.759	Anas_platyrhynchos
ENSSLDG00000003821	swt1	58	34.932	ENSACAG00000002276	SWT1	62	34.820	Anolis_carolinensis
ENSSLDG00000003821	swt1	58	33.675	ENSANAG00000027068	SWT1	60	33.675	Aotus_nancymaae
ENSSLDG00000003821	swt1	84	67.832	ENSACLG00000009742	swt1	98	67.832	Astatotilapia_calliptera
ENSSLDG00000003821	swt1	59	50.523	ENSAMXG00000010971	swt1	87	40.712	Astyanax_mexicanus
ENSSLDG00000003821	swt1	58	34.477	ENSCJAG00000005544	SWT1	60	34.477	Callithrix_jacchus
ENSSLDG00000003821	swt1	58	34.192	ENSCAFG00000013543	SWT1	60	33.986	Canis_familiaris
ENSSLDG00000003821	swt1	58	34.192	ENSCAFG00020015648	SWT1	64	34.192	Canis_lupus_dingo
ENSSLDG00000003821	swt1	58	35.112	ENSCHIG00000023511	SWT1	93	34.753	Capra_hircus
ENSSLDG00000003821	swt1	58	34.251	ENSTSYG00000010470	SWT1	60	34.251	Carlito_syrichta
ENSSLDG00000003821	swt1	53	34.270	ENSCPOG00000014251	SWT1	62	34.082	Cavia_porcellus
ENSSLDG00000003821	swt1	58	34.138	ENSCCAG00000033926	SWT1	60	34.138	Cebus_capucinus
ENSSLDG00000003821	swt1	58	34.134	ENSCATG00000042210	SWT1	92	33.618	Cercocebus_atys
ENSSLDG00000003821	swt1	58	34.300	ENSCLAG00000013959	SWT1	61	34.583	Chinchilla_lanigera
ENSSLDG00000003821	swt1	58	33.448	ENSCSAG00000012895	SWT1	60	33.791	Chlorocebus_sabaeus
ENSSLDG00000003821	swt1	58	38.079	ENSCPBG00000015691	SWT1	60	38.079	Chrysemys_picta_bellii
ENSSLDG00000003821	swt1	58	34.315	ENSCANG00000032207	SWT1	92	33.966	Colobus_angolensis_palliatus
ENSSLDG00000003821	swt1	58	34.192	ENSCGRG00001022955	Swt1	63	34.256	Cricetulus_griseus_chok1gshd
ENSSLDG00000003821	swt1	58	34.192	ENSCGRG00000010224	Swt1	61	34.256	Cricetulus_griseus_crigri
ENSSLDG00000003821	swt1	78	64.201	ENSCSEG00000017352	swt1	98	64.201	Cynoglossus_semilaevis
ENSSLDG00000003821	swt1	59	48.958	ENSDARG00000094010	swt1	56	48.958	Danio_rerio
ENSSLDG00000003821	swt1	51	34.308	ENSDNOG00000005254	SWT1	58	34.308	Dasypus_novemcinctus
ENSSLDG00000003821	swt1	58	34.247	ENSDORG00000010531	Swt1	65	34.184	Dipodomys_ordii
ENSSLDG00000003821	swt1	58	33.162	ENSEASG00005005530	SWT1	64	33.505	Equus_asinus_asinus
ENSSLDG00000003821	swt1	58	32.180	ENSECAG00000012085	SWT1	63	32.180	Equus_caballus
ENSSLDG00000003821	swt1	59	52.971	ENSELUG00000020565	swt1	57	53.445	Esox_lucius
ENSSLDG00000003821	swt1	58	34.024	ENSFCAG00000011286	SWT1	60	34.024	Felis_catus
ENSSLDG00000003821	swt1	58	35.605	ENSFALG00000003206	SWT1	62	35.605	Ficedula_albicollis
ENSSLDG00000003821	swt1	57	35.938	ENSGALG00000034230	SWT1	62	35.678	Gallus_gallus
ENSSLDG00000003821	swt1	99	50.607	ENSGAFG00000007803	-	98	50.412	Gambusia_affinis
ENSSLDG00000003821	swt1	58	38.153	ENSGAGG00000025050	SWT1	94	37.895	Gopherus_agassizii
ENSSLDG00000003821	swt1	53	34.381	ENSGGOG00000041167	-	92	34.191	Gorilla_gorilla
ENSSLDG00000003821	swt1	88	67.384	ENSHBUG00000006188	swt1	98	67.384	Haplochromis_burtoni
ENSSLDG00000003821	swt1	59	35.522	ENSHGLG00000006542	SWT1	65	35.473	Heterocephalus_glaber_female
ENSSLDG00000003821	swt1	59	35.522	ENSHGLG00100014408	SWT1	63	35.473	Heterocephalus_glaber_male
ENSSLDG00000003821	swt1	58	65.714	ENSHCOG00000016930	-	85	65.714	Hippocampus_comes
ENSSLDG00000003821	swt1	58	48.955	ENSIPUG00000009113	-	57	48.962	Ictalurus_punctatus
ENSSLDG00000003821	swt1	58	33.793	ENSSTOG00000010356	SWT1	61	33.966	Ictidomys_tridecemlineatus
ENSSLDG00000003821	swt1	58	35.274	ENSJJAG00000015927	Swt1	63	34.635	Jaculus_jaculus
ENSSLDG00000003821	swt1	100	53.636	ENSKMAG00000012533	swt1	98	53.719	Kryptolebias_marmoratus
ENSSLDG00000003821	swt1	96	60.942	ENSLBEG00000020663	-	97	61.059	Labrus_bergylta
ENSSLDG00000003821	swt1	67	35.479	ENSLACG00000009194	SWT1	91	35.479	Latimeria_chalumnae
ENSSLDG00000003821	swt1	56	43.085	ENSLOCG00000001749	swt1	97	42.629	Lepisosteus_oculatus
ENSSLDG00000003821	swt1	58	33.559	ENSLAFG00000004346	-	93	33.562	Loxodonta_africana
ENSSLDG00000003821	swt1	58	33.619	ENSMFAG00000031793	SWT1	93	33.276	Macaca_fascicularis
ENSSLDG00000003821	swt1	57	33.619	ENSMMUG00000013882	SWT1	92	32.988	Macaca_mulatta
ENSSLDG00000003821	swt1	58	33.791	ENSMNEG00000035502	SWT1	93	33.276	Macaca_nemestrina
ENSSLDG00000003821	swt1	58	34.188	ENSMLEG00000038692	SWT1	92	33.962	Mandrillus_leucophaeus
ENSSLDG00000003821	swt1	88	67.550	ENSMZEG00005018489	swt1	98	67.550	Maylandia_zebra
ENSSLDG00000003821	swt1	58	35.616	ENSMGAG00000000973	SWT1	93	35.616	Meleagris_gallopavo
ENSSLDG00000003821	swt1	58	32.332	ENSMAUG00000007996	Swt1	57	32.394	Mesocricetus_auratus
ENSSLDG00000003821	swt1	58	34.760	ENSMICG00000014975	SWT1	60	34.940	Microcebus_murinus
ENSSLDG00000003821	swt1	58	34.940	ENSMOCG00000009776	Swt1	60	34.940	Microtus_ochrogaster
ENSSLDG00000003821	swt1	58	34.429	ENSMODG00000007472	SWT1	59	34.429	Monodelphis_domestica
ENSSLDG00000003821	swt1	98	66.876	ENSMALG00000019308	swt1	98	66.597	Monopterus_albus
ENSSLDG00000003821	swt1	58	35.467	MGP_CAROLIEiJ_G0014692	Swt1	64	47.500	Mus_caroli
ENSSLDG00000003821	swt1	64	33.959	ENSMUSG00000052748	Swt1	63	46.250	Mus_musculus
ENSSLDG00000003821	swt1	58	35.043	MGP_PahariEiJ_G0027928	Swt1	64	46.250	Mus_pahari
ENSSLDG00000003821	swt1	58	35.517	MGP_SPRETEiJ_G0015499	Swt1	64	46.875	Mus_spretus
ENSSLDG00000003821	swt1	58	33.849	ENSMPUG00000011913	SWT1	61	33.618	Mustela_putorius_furo
ENSSLDG00000003821	swt1	58	33.793	ENSMLUG00000001142	SWT1	59	33.793	Myotis_lucifugus
ENSSLDG00000003821	swt1	58	34.768	ENSNGAG00000021080	Swt1	60	34.775	Nannospalax_galili
ENSSLDG00000003821	swt1	58	34.483	ENSNLEG00000018031	SWT1	60	34.483	Nomascus_leucogenys
ENSSLDG00000003821	swt1	85	68.342	ENSONIG00000009994	swt1	98	68.342	Oreochromis_niloticus
ENSSLDG00000003821	swt1	58	33.446	ENSOANG00000001013	-	70	33.110	Ornithorhynchus_anatinus
ENSSLDG00000003821	swt1	59	35.702	ENSOCUG00000004901	SWT1	62	35.919	Oryctolagus_cuniculus
ENSSLDG00000003821	swt1	99	50.406	ENSORLG00000009682	swt1	96	50.562	Oryzias_latipes
ENSSLDG00000003821	swt1	99	51.066	ENSORLG00020011654	swt1	98	50.918	Oryzias_latipes_hni
ENSSLDG00000003821	swt1	99	50.251	ENSORLG00015007734	swt1	98	50.204	Oryzias_latipes_hsok
ENSSLDG00000003821	swt1	98	51.574	ENSOMEG00000006607	swt1	98	51.574	Oryzias_melastigma
ENSSLDG00000003821	swt1	58	34.138	ENSOGAG00000016195	SWT1	60	34.138	Otolemur_garnettii
ENSSLDG00000003821	swt1	58	34.940	ENSOARG00000004156	SWT1	59	34.940	Ovis_aries
ENSSLDG00000003821	swt1	58	34.423	ENSPPAG00000021400	SWT1	60	34.247	Pan_paniscus
ENSSLDG00000003821	swt1	58	34.542	ENSPPRG00000023754	SWT1	60	34.542	Panthera_pardus
ENSSLDG00000003821	swt1	58	34.542	ENSPTIG00000021889	SWT1	60	34.542	Panthera_tigris_altaica
ENSSLDG00000003821	swt1	58	34.423	ENSPTRG00000001777	SWT1	60	34.247	Pan_troglodytes
ENSSLDG00000003821	swt1	58	33.791	ENSPANG00000005099	SWT1	92	33.962	Papio_anubis
ENSSLDG00000003821	swt1	58	48.161	ENSPKIG00000005979	swt1	59	47.538	Paramormyrops_kingsleyae
ENSSLDG00000003821	swt1	58	37.162	ENSPSIG00000008961	SWT1	60	37.162	Pelodiscus_sinensis
ENSSLDG00000003821	swt1	61	44.034	ENSPMGG00000000152	-	81	44.908	Periophthalmus_magnuspinnatus
ENSSLDG00000003821	swt1	58	35.800	ENSPEMG00000008208	Swt1	60	35.800	Peromyscus_maniculatus_bairdii
ENSSLDG00000003821	swt1	56	33.627	ENSPCIG00000002443	SWT1	56	33.451	Phascolarctos_cinereus
ENSSLDG00000003821	swt1	99	50.911	ENSPFOG00000010988	-	98	58.955	Poecilia_formosa
ENSSLDG00000003821	swt1	99	51.113	ENSPLAG00000022908	-	98	51.029	Poecilia_latipinna
ENSSLDG00000003821	swt1	99	50.913	ENSPMEG00000006943	-	98	51.134	Poecilia_mexicana
ENSSLDG00000003821	swt1	65	45.116	ENSPREG00000014723	-	86	44.498	Poecilia_reticulata
ENSSLDG00000003821	swt1	58	34.760	ENSPPYG00000000415	SWT1	60	34.760	Pongo_abelii
ENSSLDG00000003821	swt1	58	32.929	ENSPVAG00000005968	SWT1	60	32.409	Pteropus_vampyrus
ENSSLDG00000003821	swt1	88	67.550	ENSPNYG00000012934	swt1	98	67.550	Pundamilia_nyererei
ENSSLDG00000003821	swt1	78	42.694	ENSPNAG00000017795	swt1	98	37.879	Pygocentrus_nattereri
ENSSLDG00000003821	swt1	58	34.768	ENSRNOG00000032258	Swt1	62	34.655	Rattus_norvegicus
ENSSLDG00000003821	swt1	58	34.375	ENSRBIG00000040630	SWT1	92	34.375	Rhinopithecus_bieti
ENSSLDG00000003821	swt1	58	34.662	ENSSBOG00000028825	SWT1	61	34.483	Saimiri_boliviensis_boliviensis
ENSSLDG00000003821	swt1	58	35.334	ENSSHAG00000009241	SWT1	60	35.334	Sarcophilus_harrisii
ENSSLDG00000003821	swt1	58	48.410	ENSSFOG00015004895	swt1	55	48.057	Scleropages_formosus
ENSSLDG00000003821	swt1	97	65.769	ENSSMAG00000020761	-	92	66.442	Scophthalmus_maximus
ENSSLDG00000003821	swt1	100	97.919	ENSSDUG00000012345	swt1	100	97.919	Seriola_dumerili
ENSSLDG00000003821	swt1	58	37.393	ENSSPUG00000003899	SWT1	60	37.393	Sphenodon_punctatus
ENSSLDG00000003821	swt1	98	64.315	ENSSPAG00000001030	swt1	98	64.315	Stegastes_partitus
ENSSLDG00000003821	swt1	58	34.423	ENSSSCG00000015569	SWT1	62	34.768	Sus_scrofa
ENSSLDG00000003821	swt1	58	36.942	ENSTGUG00000003718	-	98	36.942	Taeniopygia_guttata
ENSSLDG00000003821	swt1	99	49.328	ENSTRUG00000006420	swt1	98	49.156	Takifugu_rubripes
ENSSLDG00000003821	swt1	58	33.391	ENSTTRG00000005914	SWT1	60	33.907	Tursiops_truncatus
ENSSLDG00000003821	swt1	58	34.138	ENSUAMG00000020937	SWT1	65	34.138	Ursus_americanus
ENSSLDG00000003821	swt1	58	34.138	ENSUMAG00000021918	SWT1	61	33.929	Ursus_maritimus
ENSSLDG00000003821	swt1	50	37.681	ENSVPAG00000011855	SWT1	52	37.681	Vicugna_pacos
ENSSLDG00000003821	swt1	58	33.849	ENSVVUG00000009182	SWT1	62	34.359	Vulpes_vulpes
ENSSLDG00000003821	swt1	99	52.333	ENSXMAG00000023472	-	98	52.268	Xiphophorus_maculatus