EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000003828 (Gene tree)
Gene ID: -
Gene Symbol: POC1A
Alias: DKFZP434C245|WDR51A
Full Name: POC1 centriolar protein A
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 41160 bases
Position: chrPEQF01099319.1:429141-470300
Accession: 111670182
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000004855	eIF2A	PF08662.11	3.7e-11	1	1
ENSSLDP00000004831	eIF2A	PF08662.11	1.6e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000004989	POC1A-201	3897	XM_023426792	ENSSLDP00000004831	468 (aa)	XP_023282560	UPI000C6F85A8
ENSSLDT00000005014	POC1A-202	996	-	ENSSLDP00000004855	331 (aa)	-	-

Gene Model

Click here to download ENSSLDG00000003828's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000003828's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000003828	POC1A	93	32.569	ENSSLDG00000021297	wdr5	99	33.197
ENSSLDG00000003828	POC1A	89	35.417	ENSSLDG00000001624	wdr61	89	35.417
ENSSLDG00000003828	POC1A	93	33.028	ENSSLDG00000005696	-	93	33.028

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000003828	POC1A	96	76.949	ENSG00000164087	POC1A	98	77.907	Homo_sapiens
ENSSLDG00000003828	POC1A	98	100.000	ENSAPOG00000002677	POC1A	99	96.207	Acanthochromis_polyacanthus
ENSSLDG00000003828	POC1A	95	76.370	ENSAMEG00000009136	POC1A	97	76.370	Ailuropoda_melanoleuca
ENSSLDG00000003828	POC1A	98	95.172	ENSACIG00000018288	poc1a	99	95.172	Amphilophus_citrinellus
ENSSLDG00000003828	POC1A	98	96.207	ENSAOCG00000001066	POC1A	100	96.207	Amphiprion_ocellaris
ENSSLDG00000003828	POC1A	98	92.647	ENSAPEG00000005795	poc1a	99	100.000	Amphiprion_percula
ENSSLDG00000003828	POC1A	96	72.754	ENSAPLG00000007756	POC1A	98	72.754	Anas_platyrhynchos
ENSSLDG00000003828	POC1A	96	75.932	ENSANAG00000030897	POC1A	98	75.932	Aotus_nancymaae
ENSSLDG00000003828	POC1A	98	95.517	ENSACLG00000017869	POC1A	99	95.517	Astatotilapia_calliptera
ENSSLDG00000003828	POC1A	93	74.006	ENSAMXG00000024703	poc1a	92	74.006	Astyanax_mexicanus
ENSSLDG00000003828	POC1A	97	77.931	ENSBTAG00000001471	POC1A	94	77.931	Bos_taurus
ENSSLDG00000003828	POC1A	96	75.593	ENSCJAG00000005972	POC1A	98	75.593	Callithrix_jacchus
ENSSLDG00000003828	POC1A	97	61.376	ENSCAFG00020022379	POC1A	98	61.376	Canis_lupus_dingo
ENSSLDG00000003828	POC1A	97	76.768	ENSCHIG00000002571	POC1A	99	76.768	Capra_hircus
ENSSLDG00000003828	POC1A	95	78.201	ENSTSYG00000008302	POC1A	97	78.201	Carlito_syrichta
ENSSLDG00000003828	POC1A	91	76.493	ENSCAPG00000016201	POC1A	70	76.493	Cavia_aperea
ENSSLDG00000003828	POC1A	95	77.163	ENSCPOG00000006740	POC1A	96	88.462	Cavia_porcellus
ENSSLDG00000003828	POC1A	96	76.271	ENSCCAG00000023380	POC1A	98	76.271	Cebus_capucinus
ENSSLDG00000003828	POC1A	97	76.109	ENSCATG00000021822	POC1A	98	75.932	Cercocebus_atys
ENSSLDG00000003828	POC1A	96	69.909	ENSCLAG00000010593	POC1A	96	88.462	Chinchilla_lanigera
ENSSLDG00000003828	POC1A	92	77.132	ENSCSAG00000013862	POC1A	98	77.132	Chlorocebus_sabaeus
ENSSLDG00000003828	POC1A	83	80.727	ENSCPBG00000016728	POC1A	98	81.985	Chrysemys_picta_bellii
ENSSLDG00000003828	POC1A	92	72.325	ENSCSAVG00000008477	-	98	66.250	Ciona_savignyi
ENSSLDG00000003828	POC1A	97	72.810	ENSCANG00000033064	POC1A	98	77.519	Colobus_angolensis_palliatus
ENSSLDG00000003828	POC1A	98	76.358	ENSCGRG00001007357	Poc1a	99	75.676	Cricetulus_griseus_chok1gshd
ENSSLDG00000003828	POC1A	99	87.931	ENSCSEG00000010287	POC1A	97	87.931	Cynoglossus_semilaevis
ENSSLDG00000003828	POC1A	98	91.986	ENSCVAG00000015594	POC1A	98	91.986	Cyprinodon_variegatus
ENSSLDG00000003828	POC1A	81	57.241	ENSEBUG00000008246	POC1A	55	57.241	Eptatretus_burgeri
ENSSLDG00000003828	POC1A	90	67.000	ENSEBUG00000002614	POC1A	60	68.919	Eptatretus_burgeri
ENSSLDG00000003828	POC1A	87	62.369	ENSEBUG00000008013	poc1a	85	61.486	Eptatretus_burgeri
ENSSLDG00000003828	POC1A	98	84.300	ENSELUG00000015504	poc1a	99	85.069	Esox_lucius
ENSSLDG00000003828	POC1A	97	76.094	ENSFCAG00000015704	POC1A	94	88.462	Felis_catus
ENSSLDG00000003828	POC1A	87	79.931	ENSFALG00000008922	POC1A	97	79.931	Ficedula_albicollis
ENSSLDG00000003828	POC1A	95	77.509	ENSFDAG00000011606	POC1A	97	88.462	Fukomys_damarensis
ENSSLDG00000003828	POC1A	99	91.319	ENSFHEG00000015504	POC1A	99	90.657	Fundulus_heteroclitus
ENSSLDG00000003828	POC1A	97	71.186	ENSGALG00000034572	-	98	71.186	Gallus_gallus
ENSSLDG00000003828	POC1A	97	84.688	ENSGACG00000007015	poc1a	99	84.688	Gasterosteus_aculeatus
ENSSLDG00000003828	POC1A	95	80.623	ENSGAGG00000014637	POC1A	97	80.623	Gopherus_agassizii
ENSSLDG00000003828	POC1A	96	76.949	ENSGGOG00000006652	POC1A	98	76.949	Gorilla_gorilla
ENSSLDG00000003828	POC1A	95	76.817	ENSHGLG00000013436	POC1A	97	88.462	Heterocephalus_glaber_female
ENSSLDG00000003828	POC1A	95	76.817	ENSHGLG00100003479	POC1A	98	76.817	Heterocephalus_glaber_male
ENSSLDG00000003828	POC1A	99	77.740	ENSIPUG00000001227	POC1A	99	76.792	Ictalurus_punctatus
ENSSLDG00000003828	POC1A	98	75.399	ENSSTOG00000002638	POC1A	98	76.610	Ictidomys_tridecemlineatus
ENSSLDG00000003828	POC1A	95	76.817	ENSJJAG00000018739	Poc1a	93	84.615	Jaculus_jaculus
ENSSLDG00000003828	POC1A	98	100.000	ENSLBEG00000016119	POC1A	99	94.138	Labrus_bergylta
ENSSLDG00000003828	POC1A	87	81.661	ENSLACG00000018788	POC1A	98	81.661	Latimeria_chalumnae
ENSSLDG00000003828	POC1A	96	85.467	ENSLOCG00000013801	poc1a	98	85.467	Lepisosteus_oculatus
ENSSLDG00000003828	POC1A	99	71.521	ENSLAFG00000028434	POC1A	99	73.244	Loxodonta_africana
ENSSLDG00000003828	POC1A	92	76.744	ENSMFAG00000001970	POC1A	98	76.744	Macaca_fascicularis
ENSSLDG00000003828	POC1A	96	75.932	ENSMMUG00000012485	POC1A	98	75.932	Macaca_mulatta
ENSSLDG00000003828	POC1A	92	76.744	ENSMNEG00000042811	POC1A	98	76.744	Macaca_nemestrina
ENSSLDG00000003828	POC1A	97	72.205	ENSMLEG00000039574	POC1A	98	76.744	Mandrillus_leucophaeus
ENSSLDG00000003828	POC1A	95	95.113	ENSMAMG00000014233	POC1A	99	95.113	Mastacembelus_armatus
ENSSLDG00000003828	POC1A	98	95.517	ENSMZEG00005013503	POC1A	99	95.517	Maylandia_zebra
ENSSLDG00000003828	POC1A	97	78.694	ENSMGAG00000001628	POC1A	98	78.694	Meleagris_gallopavo
ENSSLDG00000003828	POC1A	98	76.358	ENSMAUG00000017403	Poc1a	97	77.509	Mesocricetus_auratus
ENSSLDG00000003828	POC1A	96	77.966	ENSMICG00000002709	POC1A	96	76.923	Microcebus_murinus
ENSSLDG00000003828	POC1A	87	77.855	ENSMOCG00000003396	Poc1a	85	74.695	Microtus_ochrogaster
ENSSLDG00000003828	POC1A	99	88.396	ENSMMOG00000010427	poc1a	96	88.396	Mola_mola
ENSSLDG00000003828	POC1A	92	74.510	ENSMODG00000011717	POC1A	81	75.080	Monodelphis_domestica
ENSSLDG00000003828	POC1A	98	86.704	ENSMALG00000009054	poc1a	96	100.000	Monopterus_albus
ENSSLDG00000003828	POC1A	97	78.146	MGP_CAROLIEiJ_G0032617	Poc1a	94	82.143	Mus_caroli
ENSSLDG00000003828	POC1A	97	78.146	ENSMUSG00000023345	Poc1a	98	78.295	Mus_musculus
ENSSLDG00000003828	POC1A	97	78.146	MGP_PahariEiJ_G0015485	Poc1a	94	82.143	Mus_pahari
ENSSLDG00000003828	POC1A	97	78.146	MGP_SPRETEiJ_G0033763	Poc1a	94	82.143	Mus_spretus
ENSSLDG00000003828	POC1A	97	75.758	ENSMPUG00000011723	POC1A	99	75.758	Mustela_putorius_furo
ENSSLDG00000003828	POC1A	95	78.201	ENSMLUG00000015092	POC1A	89	78.201	Myotis_lucifugus
ENSSLDG00000003828	POC1A	95	78.547	ENSNGAG00000005212	Poc1a	97	78.547	Nannospalax_galili
ENSSLDG00000003828	POC1A	96	94.737	ENSNBRG00000022135	poc1a	98	94.737	Neolamprologus_brichardi
ENSSLDG00000003828	POC1A	97	74.204	ENSNLEG00000007084	POC1A	98	76.744	Nomascus_leucogenys
ENSSLDG00000003828	POC1A	95	88.462	ENSMEUG00000007715	-	78	88.462	Notamacropus_eugenii
ENSSLDG00000003828	POC1A	92	77.395	ENSOPRG00000008831	POC1A	90	77.395	Ochotona_princeps
ENSSLDG00000003828	POC1A	95	77.509	ENSODEG00000018290	POC1A	97	80.851	Octodon_degus
ENSSLDG00000003828	POC1A	98	94.483	ENSONIG00000014378	POC1A	99	94.483	Oreochromis_niloticus
ENSSLDG00000003828	POC1A	92	77.519	ENSOCUG00000002080	POC1A	98	77.519	Oryctolagus_cuniculus
ENSSLDG00000003828	POC1A	98	94.286	ENSOMEG00000019834	POC1A	99	89.384	Oryzias_melastigma
ENSSLDG00000003828	POC1A	88	78.425	ENSOGAG00000032245	POC1A	85	71.307	Otolemur_garnettii
ENSSLDG00000003828	POC1A	97	76.768	ENSOARG00000006352	POC1A	99	76.768	Ovis_aries
ENSSLDG00000003828	POC1A	97	74.921	ENSPPAG00000043583	POC1A	98	77.907	Pan_paniscus
ENSSLDG00000003828	POC1A	97	76.094	ENSPPRG00000003365	POC1A	94	88.462	Panthera_pardus
ENSSLDG00000003828	POC1A	92	77.132	ENSPTIG00000005388	POC1A	98	77.132	Panthera_tigris_altaica
ENSSLDG00000003828	POC1A	97	74.921	ENSPTRG00000014989	POC1A	98	77.907	Pan_troglodytes
ENSSLDG00000003828	POC1A	87	82.007	ENSPSIG00000014809	POC1A	90	79.180	Pelodiscus_sinensis
ENSSLDG00000003828	POC1A	88	90.690	ENSPMGG00000005356	poc1a	87	80.802	Periophthalmus_magnuspinnatus
ENSSLDG00000003828	POC1A	87	77.509	ENSPEMG00000024131	Poc1a	94	77.199	Peromyscus_maniculatus_bairdii
ENSSLDG00000003828	POC1A	94	78.201	ENSPMAG00000000333	poc1a	97	78.201	Petromyzon_marinus
ENSSLDG00000003828	POC1A	94	74.277	ENSPCIG00000018160	POC1A	98	74.516	Phascolarctos_cinereus
ENSSLDG00000003828	POC1A	96	76.949	ENSPPYG00000013816	POC1A	98	76.949	Pongo_abelii
ENSSLDG00000003828	POC1A	99	77.104	ENSPCAG00000002118	POC1A	99	77.104	Procavia_capensis
ENSSLDG00000003828	POC1A	97	75.394	ENSPCOG00000012625	POC1A	96	75.394	Propithecus_coquereli
ENSSLDG00000003828	POC1A	71	88.462	ENSPVAG00000012480	POC1A	82	88.462	Pteropus_vampyrus
ENSSLDG00000003828	POC1A	96	95.088	ENSPNYG00000019517	poc1a	98	80.519	Pundamilia_nyererei
ENSSLDG00000003828	POC1A	97	80.063	ENSPNAG00000007556	POC1A	97	80.063	Pygocentrus_nattereri
ENSSLDG00000003828	POC1A	95	75.000	ENSRNOG00000037295	Poc1a	78	75.000	Rattus_norvegicus
ENSSLDG00000003828	POC1A	92	77.519	ENSRBIG00000031748	POC1A	98	77.519	Rhinopithecus_bieti
ENSSLDG00000003828	POC1A	92	77.132	ENSRROG00000044472	POC1A	98	77.132	Rhinopithecus_roxellana
ENSSLDG00000003828	POC1A	92	77.519	ENSSBOG00000027902	POC1A	98	77.519	Saimiri_boliviensis_boliviensis
ENSSLDG00000003828	POC1A	98	94.828	ENSSMAG00000013505	POC1A	99	94.881	Scophthalmus_maximus
ENSSLDG00000003828	POC1A	100	99.145	ENSSDUG00000016161	POC1A	100	99.145	Seriola_dumerili
ENSSLDG00000003828	POC1A	92	92.593	ENSSPUG00000008656	POC1A	71	92.593	Sphenodon_punctatus
ENSSLDG00000003828	POC1A	99	44.479	ENSSPAG00000020330	POC1A	95	75.862	Stegastes_partitus
ENSSLDG00000003828	POC1A	95	77.855	ENSSSCG00000011426	POC1A	97	77.855	Sus_scrofa
ENSSLDG00000003828	POC1A	95	79.931	ENSTGUG00000006036	POC1A	98	79.931	Taeniopygia_guttata
ENSSLDG00000003828	POC1A	93	85.467	ENSTRUG00000007900	POC1A	96	74.719	Takifugu_rubripes
ENSSLDG00000003828	POC1A	97	85.911	ENSTNIG00000014818	POC1A	99	85.911	Tetraodon_nigroviridis
ENSSLDG00000003828	POC1A	97	74.359	ENSTTRG00000016798	POC1A	98	74.915	Tursiops_truncatus
ENSSLDG00000003828	POC1A	95	76.027	ENSUAMG00000020816	POC1A	98	76.027	Ursus_americanus
ENSSLDG00000003828	POC1A	92	76.357	ENSUMAG00000021482	POC1A	98	76.357	Ursus_maritimus
ENSSLDG00000003828	POC1A	94	80.496	ENSXETG00000010813	poc1a	96	78.397	Xenopus_tropicalis