EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSLDG00000003885 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
probable small nuclear ribonucleoprotein F
Gene Type
protein_coding
Species
Seriola_lalandi_dorsalis
Status
putative
Strand
Minus strand
Length
249 bases
Position
chrPEQF01067872.1:104-352
Accession
111645818
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSLDP00000004886LSMPF01423.224.7e-1811
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSLDT00000005046-249XM_023395130ENSSLDP0000000488682 (aa)XP_023250898UPI000C6F9340
Gene Model
Click here to download ENSSLDG00000003885's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000003885's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSLDG00000003885-8436.232ENSSLDG00000004136-5936.232
ENSSLDG00000003885-8938.356ENSSLDG00000020533lsm67638.356
ENSSLDG00000003885-8975.342ENSSLDG00000005119snrpf9272.152
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSLDG00000003885-9077.027ENSG00000139343SNRPF9373.750Homo_sapiens
ENSSLDG00000003885-9372.368ENSAPOG00000003377snrpf6469.512Acanthochromis_polyacanthus
ENSSLDG00000003885-8771.831ENSAMEG00000018718-9068.831Ailuropoda_melanoleuca
ENSSLDG00000003885-9077.027ENSAMEG00000002166-9473.750Ailuropoda_melanoleuca
ENSSLDG00000003885-8975.342ENSACIG00000013216snrpf9372.152Amphilophus_citrinellus
ENSSLDG00000003885-8975.342ENSAOCG00000015108snrpf9372.152Amphiprion_ocellaris
ENSSLDG00000003885-8975.342ENSAPEG00000022022snrpf9372.152Amphiprion_percula
ENSSLDG00000003885-8975.342ENSATEG00000022625snrpf8572.152Anabas_testudineus
ENSSLDG00000003885-9376.316ENSACAG00000014073SNRPF9473.171Anolis_carolinensis
ENSSLDG00000003885-9056.757ENSANAG00000025860-9255.000Aotus_nancymaae
ENSSLDG00000003885-8773.239ENSANAG00000020297-7170.130Aotus_nancymaae
ENSSLDG00000003885-9077.027ENSANAG00000032845SNRPF9373.750Aotus_nancymaae
ENSSLDG00000003885-8975.342ENSACLG00000016066snrpf9372.152Astatotilapia_calliptera
ENSSLDG00000003885-9071.622ENSAMXG00000007421snrpf9368.750Astyanax_mexicanus
ENSSLDG00000003885-9077.027ENSBTAG00000016271SNRPF9373.750Bos_taurus
ENSSLDG00000003885-9471.429ENSBTAG00000050012-9571.429Bos_taurus
ENSSLDG00000003885-9970.732WBGene00004918snr-59670.732Caenorhabditis_elegans
ENSSLDG00000003885-9077.027ENSCJAG00000002705-9373.750Callithrix_jacchus
ENSSLDG00000003885-9077.027ENSCAFG00000006395-7273.750Canis_familiaris
ENSSLDG00000003885-8873.611ENSCAFG00000031151-9370.000Canis_familiaris
ENSSLDG00000003885-8873.611ENSCAFG00020010823-9370.000Canis_lupus_dingo
ENSSLDG00000003885-8975.342ENSCAFG00020013161-7875.342Canis_lupus_dingo
ENSSLDG00000003885-8873.973ENSTSYG00000036502-9369.136Carlito_syrichta
ENSSLDG00000003885-9068.919ENSTSYG00000030635-9366.250Carlito_syrichta
ENSSLDG00000003885-9969.136ENSTSYG00000031636-6869.136Carlito_syrichta
ENSSLDG00000003885-9077.027ENSCAPG00000007242SNRPF9473.750Cavia_aperea
ENSSLDG00000003885-9077.027ENSCPOG00000013898SNRPF9373.750Cavia_porcellus
ENSSLDG00000003885-9077.027ENSCCAG00000037378-9373.750Cebus_capucinus
ENSSLDG00000003885-9668.354ENSCCAG00000033627-6268.354Cebus_capucinus
ENSSLDG00000003885-8877.778ENSCCAG00000017356-9076.623Cebus_capucinus
ENSSLDG00000003885-9377.632ENSCLAG00000007200SNRPF9474.390Chinchilla_lanigera
ENSSLDG00000003885-9077.027ENSCSAG00000003602-6573.750Chlorocebus_sabaeus
ENSSLDG00000003885-7776.190ENSCHOG00000009392SNRPF9876.190Choloepus_hoffmanni
ENSSLDG00000003885-9867.500ENSCPBG00000026463-9367.500Chrysemys_picta_bellii
ENSSLDG00000003885-9072.973ENSCPBG00000006227-9371.250Chrysemys_picta_bellii
ENSSLDG00000003885-9867.500ENSCPBG00000001985-9567.500Chrysemys_picta_bellii
ENSSLDG00000003885-9972.840ENSCPBG00000024287-6572.840Chrysemys_picta_bellii
ENSSLDG00000003885-10073.171ENSCSAVG00000007498-9273.171Ciona_savignyi
ENSSLDG00000003885-9077.027ENSCGRG00001017100-9373.750Cricetulus_griseus_chok1gshd
ENSSLDG00000003885-8975.342ENSCGRG00001008965-6172.152Cricetulus_griseus_chok1gshd
ENSSLDG00000003885-9077.027ENSCGRG00000000336-9373.750Cricetulus_griseus_crigri
ENSSLDG00000003885-9573.077ENSCGRG00000018878-9773.077Cricetulus_griseus_crigri
ENSSLDG00000003885-9173.333ENSCSEG00000004748snrpf9371.250Cynoglossus_semilaevis
ENSSLDG00000003885-9372.368ENSCVAG00000000397snrpf6569.512Cyprinodon_variegatus
ENSSLDG00000003885-9072.368ENSDARG00000105037snrpf9369.512Danio_rerio
ENSSLDG00000003885-8571.429ENSDNOG00000049373-6866.667Dasypus_novemcinctus
ENSSLDG00000003885-9077.027ENSDNOG00000043775-5173.750Dasypus_novemcinctus
ENSSLDG00000003885-9077.027ENSDNOG00000048989-7173.750Dasypus_novemcinctus
ENSSLDG00000003885-8766.197ENSDORG00000025351-9966.197Dipodomys_ordii
ENSSLDG00000003885-7276.271ENSDORG00000029740-7972.308Dipodomys_ordii
ENSSLDG00000003885-9967.901FBgn0000426SmF9267.901Drosophila_melanogaster
ENSSLDG00000003885-9077.027ENSETEG00000001558-9373.750Echinops_telfairi
ENSSLDG00000003885-9466.234ENSEBUG00000001793-8366.234Eptatretus_burgeri
ENSSLDG00000003885-9077.027ENSECAG00000019817SNRPF6573.750Equus_caballus
ENSSLDG00000003885-9077.027ENSEEUG00000013509SNRPF9473.750Erinaceus_europaeus
ENSSLDG00000003885-9172.000ENSELUG00000007737RUXF9270.000Esox_lucius
ENSSLDG00000003885-9074.324ENSELUG00000003121RUXF9371.250Esox_lucius
ENSSLDG00000003885-9077.027ENSFCAG00000029966-9373.750Felis_catus
ENSSLDG00000003885-9056.757ENSFCAG00000031148-7355.000Felis_catus
ENSSLDG00000003885-9055.405ENSFCAG00000021942-9353.750Felis_catus
ENSSLDG00000003885-9176.000ENSFALG00000010799SNRPF9472.840Ficedula_albicollis
ENSSLDG00000003885-9077.027ENSFDAG00000002831-9373.750Fukomys_damarensis
ENSSLDG00000003885-9372.368ENSFHEG00000003240snrpf7269.512Fundulus_heteroclitus
ENSSLDG00000003885-9074.324ENSGMOG00000007741snrpf9471.250Gadus_morhua
ENSSLDG00000003885-9077.027ENSGALG00000011409SNRPF9373.750Gallus_gallus
ENSSLDG00000003885-9373.684ENSGAFG00000016187snrpf9470.732Gambusia_affinis
ENSSLDG00000003885-9072.973ENSGACG00000020055snrpf9470.000Gasterosteus_aculeatus
ENSSLDG00000003885-8364.706ENSGAGG00000014132-9360.000Gopherus_agassizii
ENSSLDG00000003885-6776.364ENSGAGG00000011163-9576.364Gopherus_agassizii
ENSSLDG00000003885-7472.131ENSGAGG00000020974-5172.131Gopherus_agassizii
ENSSLDG00000003885-9074.324ENSGAGG00000022991-8674.324Gopherus_agassizii
ENSSLDG00000003885-8375.000ENSGAGG00000012945-7371.250Gopherus_agassizii
ENSSLDG00000003885-9059.459ENSGGOG00000039936-9057.500Gorilla_gorilla
ENSSLDG00000003885-8978.082ENSGGOG00000001127-9374.684Gorilla_gorilla
ENSSLDG00000003885-9555.128ENSGGOG00000039564-9555.128Gorilla_gorilla
ENSSLDG00000003885-9075.676ENSHGLG00000021172-9372.500Heterocephalus_glaber_female
ENSSLDG00000003885-9077.027ENSHGLG00000009108SNRPF9373.750Heterocephalus_glaber_female
ENSSLDG00000003885-9075.676ENSHGLG00100019596-9372.500Heterocephalus_glaber_male
ENSSLDG00000003885-9077.027ENSHGLG00100008103-9473.750Heterocephalus_glaber_male
ENSSLDG00000003885-7767.143ENSHCOG00000018663snrpf5567.143Hippocampus_comes
ENSSLDG00000003885-8975.342ENSIPUG00000018994snrpf9372.152Ictalurus_punctatus
ENSSLDG00000003885-9077.027ENSSTOG00000010434-9373.750Ictidomys_tridecemlineatus
ENSSLDG00000003885-9376.316ENSJJAG00000011272-9473.171Jaculus_jaculus
ENSSLDG00000003885-9860.000ENSJJAG00000004558-9560.000Jaculus_jaculus
ENSSLDG00000003885-7675.806ENSJJAG00000004828-9575.806Jaculus_jaculus
ENSSLDG00000003885-9863.750ENSJJAG00000010502-9563.750Jaculus_jaculus
ENSSLDG00000003885-8975.342ENSKMAG00000013566snrpf9272.152Kryptolebias_marmoratus
ENSSLDG00000003885-9074.324ENSLBEG00000008800snrpf9371.250Labrus_bergylta
ENSSLDG00000003885-9077.027ENSLACG00000002456-6873.750Latimeria_chalumnae
ENSSLDG00000003885-9071.622ENSLOCG00000015744snrpf9368.750Lepisosteus_oculatus
ENSSLDG00000003885-9176.000ENSLAFG00000017426SNRPF9472.840Loxodonta_africana
ENSSLDG00000003885-8975.342ENSMAMG00000016593snrpf9372.152Mastacembelus_armatus
ENSSLDG00000003885-8975.342ENSMZEG00005014701snrpf9372.152Maylandia_zebra
ENSSLDG00000003885-8978.082ENSMGAG00000011453-7174.684Meleagris_gallopavo
ENSSLDG00000003885-6880.357ENSMAUG00000010289-7280.357Mesocricetus_auratus
ENSSLDG00000003885-7679.032ENSMAUG00000016909-9275.000Mesocricetus_auratus
ENSSLDG00000003885-9071.622ENSMAUG00000008799-9368.750Mesocricetus_auratus
ENSSLDG00000003885-7679.032ENSMAUG00000019737-9275.000Mesocricetus_auratus
ENSSLDG00000003885-9070.270ENSMICG00000030494-6467.500Microcebus_murinus
ENSSLDG00000003885-9077.027ENSMICG00000012153-9373.750Microcebus_murinus
ENSSLDG00000003885-9077.027ENSMOCG00000020437Snrpf9373.750Microtus_ochrogaster
ENSSLDG00000003885-8369.118ENSMOCG00000020220-9468.493Microtus_ochrogaster
ENSSLDG00000003885-8967.123ENSMOCG00000022166-8666.667Microtus_ochrogaster
ENSSLDG00000003885-9072.973ENSMMOG00000007127snrpf9470.000Mola_mola
ENSSLDG00000003885-9077.027ENSMODG00000008091SNRPF7073.750Monodelphis_domestica
ENSSLDG00000003885-8975.342ENSMALG00000012328snrpf9372.152Monopterus_albus
ENSSLDG00000003885-9077.027MGP_CAROLIEiJ_G0015735-9373.750Mus_caroli
ENSSLDG00000003885-9077.027ENSMUSG00000020018Snrpf9373.750Mus_musculus
ENSSLDG00000003885-9077.027MGP_PahariEiJ_G0031350Snrpf9373.750Mus_pahari
ENSSLDG00000003885-9077.027MGP_SPRETEiJ_G0016553Snrpf9373.750Mus_spretus
ENSSLDG00000003885-9077.027ENSMPUG00000007176-7173.750Mustela_putorius_furo
ENSSLDG00000003885-9077.027ENSMLUG00000027932-7573.750Myotis_lucifugus
ENSSLDG00000003885-9077.027ENSMLUG00000013577-9473.750Myotis_lucifugus
ENSSLDG00000003885-8859.722ENSMLUG00000026269-7556.250Myotis_lucifugus
ENSSLDG00000003885-9077.027ENSMLUG00000029201-7573.750Myotis_lucifugus
ENSSLDG00000003885-9077.027ENSMLUG00000026149-7573.750Myotis_lucifugus
ENSSLDG00000003885-9077.027ENSNGAG00000024292-9373.750Nannospalax_galili
ENSSLDG00000003885-7769.841ENSNGAG00000005851-7469.841Nannospalax_galili
ENSSLDG00000003885-9372.368ENSNBRG00000011682snrpf8469.512Neolamprologus_brichardi
ENSSLDG00000003885-9055.405ENSMEUG00000000671SNRPF9453.750Notamacropus_eugenii
ENSSLDG00000003885-8978.082ENSODEG00000010328-9374.684Octodon_degus
ENSSLDG00000003885-9077.027ENSOCUG00000010925SNRPF7173.750Oryctolagus_cuniculus
ENSSLDG00000003885-9071.622ENSORLG00020008216snrpf9468.750Oryzias_latipes_hni
ENSSLDG00000003885-9071.622ENSORLG00015007418snrpf9468.750Oryzias_latipes_hsok
ENSSLDG00000003885-8973.973ENSOMEG00000003018snrpf9370.886Oryzias_melastigma
ENSSLDG00000003885-9075.676ENSOGAG00000030323-9372.500Otolemur_garnettii
ENSSLDG00000003885-9077.027ENSOARG00000011853-7073.750Ovis_aries
ENSSLDG00000003885-9553.846ENSPPAG00000037479-9553.846Pan_paniscus
ENSSLDG00000003885-9058.108ENSPPAG00000037544-9056.250Pan_paniscus
ENSSLDG00000003885-9855.000ENSPPRG00000007449-8255.000Panthera_pardus
ENSSLDG00000003885-9077.027ENSPPRG00000005875-9373.750Panthera_pardus
ENSSLDG00000003885-9056.757ENSPTIG00000005117-9555.000Panthera_tigris_altaica
ENSSLDG00000003885-9077.027ENSPTIG00000007520SNRPF9373.750Panthera_tigris_altaica
ENSSLDG00000003885-9553.846ENSPTRG00000047717-9553.846Pan_troglodytes
ENSSLDG00000003885-9058.108ENSPTRG00000043814-9056.250Pan_troglodytes
ENSSLDG00000003885-9372.368ENSPKIG00000014784snrpf8970.370Paramormyrops_kingsleyae
ENSSLDG00000003885-9176.000ENSPSIG00000016462SNRPF9472.840Pelodiscus_sinensis
ENSSLDG00000003885-9072.973ENSPMGG00000023548snrpf9470.000Periophthalmus_magnuspinnatus
ENSSLDG00000003885-9376.316ENSPEMG00000023326Snrpf9473.171Peromyscus_maniculatus_bairdii
ENSSLDG00000003885-8975.342ENSPLAG00000023932snrpf9372.152Poecilia_latipinna
ENSSLDG00000003885-8975.342ENSPMEG00000003377snrpf9372.152Poecilia_mexicana
ENSSLDG00000003885-9375.000ENSPREG00000022635snrpf9471.951Poecilia_reticulata
ENSSLDG00000003885-9077.027ENSPPYG00000004847-9373.750Pongo_abelii
ENSSLDG00000003885-9077.027ENSPCOG00000023833-9373.750Propithecus_coquereli
ENSSLDG00000003885-9077.027ENSPVAG00000009036SNRPF9373.750Pteropus_vampyrus
ENSSLDG00000003885-8975.342ENSPNYG00000021712snrpf9372.152Pundamilia_nyererei
ENSSLDG00000003885-8973.973ENSPNAG00000019117snrpf9370.886Pygocentrus_nattereri
ENSSLDG00000003885-9077.027ENSRNOG00000005556Snrpf9373.750Rattus_norvegicus
ENSSLDG00000003885-9074.324ENSRBIG00000030414-9371.250Rhinopithecus_bieti
ENSSLDG00000003885-9074.324ENSRROG00000021975-9371.250Rhinopithecus_roxellana
ENSSLDG00000003885-8955.405YPR182WSMX38655.405Saccharomyces_cerevisiae
ENSSLDG00000003885-9077.027ENSSBOG00000036179-9373.750Saimiri_boliviensis_boliviensis
ENSSLDG00000003885-9064.865ENSSBOG00000032297-9165.000Saimiri_boliviensis_boliviensis
ENSSLDG00000003885-9059.740ENSSBOG00000027638-9457.317Saimiri_boliviensis_boliviensis
ENSSLDG00000003885-9077.027ENSSBOG00000012868-9276.250Saimiri_boliviensis_boliviensis
ENSSLDG00000003885-9176.000ENSSHAG00000012294SNRPF7372.840Sarcophilus_harrisii
ENSSLDG00000003885-7973.846ENSSFOG00015021523snrpf9773.846Scleropages_formosus
ENSSLDG00000003885-9372.368ENSSMAG00000005533snrpf9469.512Scophthalmus_maximus
ENSSLDG00000003885-7873.438ENSSDUG00000016283snrpf7673.438Seriola_dumerili
ENSSLDG00000003885-8978.082ENSSPUG00000014590-9374.684Sphenodon_punctatus
ENSSLDG00000003885-9174.667ENSSPAG00000003283snrpf9271.605Stegastes_partitus
ENSSLDG00000003885-9077.027ENSSSCG00000000895SNRPF9373.750Sus_scrofa
ENSSLDG00000003885-7174.138ENSTRUG00000014956snrpf9370.312Takifugu_rubripes
ENSSLDG00000003885-9074.324ENSTNIG00000012672snrpf9371.250Tetraodon_nigroviridis
ENSSLDG00000003885-9055.405ENSTTRG00000006070SNRPF9353.750Tursiops_truncatus
ENSSLDG00000003885-9077.027ENSUAMG00000008176-9373.750Ursus_americanus
ENSSLDG00000003885-9668.354ENSUAMG00000001101-9368.354Ursus_americanus
ENSSLDG00000003885-8773.239ENSUMAG00000006177-9368.354Ursus_maritimus
ENSSLDG00000003885-9077.027ENSUMAG00000003528-9373.750Ursus_maritimus
ENSSLDG00000003885-9077.027ENSVPAG00000008712-9373.750Vicugna_pacos
ENSSLDG00000003885-9471.429ENSVVUG00000023821-9971.429Vulpes_vulpes
ENSSLDG00000003885-9058.974ENSXETG00000021630snrpf9457.143Xenopus_tropicalis
ENSSLDG00000003885-9375.000ENSXCOG00000013860snrpf9471.951Xiphophorus_couchianus
ENSSLDG00000003885-8975.342ENSXMAG00000015448snrpf9372.152Xiphophorus_maculatus

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