EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000003982 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: 40S ribosomal protein S27-2-like
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 267 bases
Position: chrPEQF01068212.1:78-344
Accession: 111645836
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000005003	Ribosomal_S27e	PF01667.17	9e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000005163	-	267	XM_023395154	ENSSLDP00000005003	88 (aa)	XP_023250922	-

Gene Model

Click here to download ENSSLDG00000003982's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000003982's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000003982	-	88	80.519	ENSSLDG00000024647	rps27l	87	80.519
ENSSLDG00000003982	-	81	59.804	ENSSLDG00000014234	-	82	59.804
ENSSLDG00000003982	-	81	67.606	ENSSLDG00000001550	-	76	67.606
ENSSLDG00000003982	-	88	85.714	ENSSLDG00000015842	rps27.2	93	85.714

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000003982	-	89	76.923	WBGene00004496	rps-27	94	76.923	Caenorhabditis_elegans
ENSSLDG00000003982	-	90	74.684	FBgn0039300	RpS27	94	74.684	Drosophila_melanogaster
ENSSLDG00000003982	-	81	64.789	ENSFHEG00000004295	-	51	64.789	Fundulus_heteroclitus
ENSSLDG00000003982	-	88	66.234	ENSGAFG00000016054	-	56	66.234	Gambusia_affinis
ENSSLDG00000003982	-	92	70.370	ENSGACG00000011286	-	95	70.370	Gasterosteus_aculeatus
ENSSLDG00000003982	-	92	64.198	ENSMMOG00000020318	-	98	64.198	Mola_mola
ENSSLDG00000003982	-	88	67.532	ENSPFOG00000004190	-	96	67.532	Poecilia_formosa
ENSSLDG00000003982	-	88	67.532	ENSPLAG00000013332	-	92	67.532	Poecilia_latipinna
ENSSLDG00000003982	-	88	67.532	ENSPLAG00000023590	-	92	67.532	Poecilia_latipinna
ENSSLDG00000003982	-	88	65.385	ENSPMEG00000017808	-	85	65.385	Poecilia_mexicana
ENSSLDG00000003982	-	88	70.130	YKL156W	RPS27A	94	70.130	Saccharomyces_cerevisiae
ENSSLDG00000003982	-	88	71.429	YHR021C	RPS27B	94	71.429	Saccharomyces_cerevisiae
ENSSLDG00000003982	-	88	67.532	ENSXCOG00000010263	-	93	67.532	Xiphophorus_couchianus
ENSSLDG00000003982	-	81	66.197	ENSXMAG00000003387	-	83	66.197	Xiphophorus_maculatus