EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000004364 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: probable small nuclear ribonucleoprotein G
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 222 bases
Position: chrPEQF01073050.1:88-309
Accession: 111646107
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000005473	LSM	PF01423.22	3.4e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000005650	-	222	XM_023395514	ENSSLDP00000005473	73 (aa)	XP_023251282	UPI000C6F7712

Gene Model

Click here to download ENSSLDG00000004364's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000004364's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000004364	-	75	36.364	ENSSLDG00000020533	lsm6	57	36.364
ENSSLDG00000004364	-	60	45.833	ENSSLDG00000016870	lsm8	64	45.833
ENSSLDG00000004364	-	68	35.294	ENSSLDG00000015364	snrpe	61	35.294
ENSSLDG00000004364	-	77	35.593	ENSSLDG00000008014	-	70	35.593
ENSSLDG00000004364	-	88	59.375	ENSSLDG00000015482	snrpg	84	59.375
ENSSLDG00000004364	-	88	40.000	ENSSLDG00000016339	lsm7	73	40.000
ENSSLDG00000004364	-	81	37.288	ENSSLDG00000005119	snrpf	71	37.705

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000004364	-	88	53.125	WBGene00004920	snr-7	83	53.125	Caenorhabditis_elegans
ENSSLDG00000004364	-	88	44.776	YFL017W-A	SMX2	87	44.776	Saccharomyces_cerevisiae