EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000004385 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: uncharacterized LOC111646136
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 3200 bases
Position: chrPEQF01073319.1:52-3251
Accession: 111646136
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000005494	zf-CCHC	PF00098.23	3.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000005671	-	3200	XM_023395558	ENSSLDP00000005494	958 (aa)	XP_023251326	-

Gene Model

Click here to download ENSSLDG00000004385's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000004385's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000004385	-	86	64.407	ENSAPOG00000013711	-	98	64.778	Acanthochromis_polyacanthus
ENSSLDG00000004385	-	79	66.798	ENSAPOG00000013817	-	99	66.798	Acanthochromis_polyacanthus
ENSSLDG00000004385	-	63	46.546	ENSAPOG00000012135	-	51	46.546	Acanthochromis_polyacanthus
ENSSLDG00000004385	-	98	44.364	ENSACLG00000024091	-	61	44.364	Astatotilapia_calliptera
ENSSLDG00000004385	-	79	33.333	ENSACLG00000018060	-	50	33.333	Astatotilapia_calliptera
ENSSLDG00000004385	-	54	43.972	ENSACLG00000022183	-	77	43.571	Astatotilapia_calliptera
ENSSLDG00000004385	-	84	30.901	ENSACLG00000000499	-	52	30.901	Astatotilapia_calliptera
ENSSLDG00000004385	-	73	43.847	ENSACLG00000001563	-	68	43.847	Astatotilapia_calliptera
ENSSLDG00000004385	-	85	36.543	ENSACLG00000019876	-	54	36.512	Astatotilapia_calliptera
ENSSLDG00000004385	-	98	45.398	ENSACLG00000017161	-	61	45.295	Astatotilapia_calliptera
ENSSLDG00000004385	-	99	61.368	ENSACLG00000026879	-	63	61.368	Astatotilapia_calliptera
ENSSLDG00000004385	-	85	30.189	ENSACLG00000002180	-	53	30.233	Astatotilapia_calliptera
ENSSLDG00000004385	-	84	32.209	ENSACLG00000027291	-	52	32.209	Astatotilapia_calliptera
ENSSLDG00000004385	-	84	31.359	ENSACLG00000014870	-	52	31.359	Astatotilapia_calliptera
ENSSLDG00000004385	-	85	36.195	ENSACLG00000014619	-	54	36.512	Astatotilapia_calliptera
ENSSLDG00000004385	-	83	36.727	ENSACLG00000015735	-	96	36.545	Astatotilapia_calliptera
ENSSLDG00000004385	-	85	36.543	ENSACLG00000010042	-	65	36.543	Astatotilapia_calliptera
ENSSLDG00000004385	-	98	44.467	ENSACLG00000025719	-	61	44.467	Astatotilapia_calliptera
ENSSLDG00000004385	-	98	44.571	ENSACLG00000009628	-	61	44.571	Astatotilapia_calliptera
ENSSLDG00000004385	-	55	41.463	ENSACLG00000000367	-	54	42.336	Astatotilapia_calliptera
ENSSLDG00000004385	-	84	30.787	ENSACLG00000017808	-	52	30.787	Astatotilapia_calliptera
ENSSLDG00000004385	-	82	30.072	ENSAMXG00000038578	-	59	30.024	Astyanax_mexicanus
ENSSLDG00000004385	-	84	30.986	ENSAMXG00000031698	-	51	31.221	Astyanax_mexicanus
ENSSLDG00000004385	-	83	32.907	ENSAMXG00000041112	-	70	33.371	Astyanax_mexicanus
ENSSLDG00000004385	-	85	44.634	ENSFHEG00000000971	-	71	44.634	Fundulus_heteroclitus
ENSSLDG00000004385	-	77	37.845	ENSGAGG00000002373	-	81	37.845	Gopherus_agassizii
ENSSLDG00000004385	-	85	37.569	ENSGAGG00000023170	-	74	37.569	Gopherus_agassizii
ENSSLDG00000004385	-	82	59.722	ENSKMAG00000018163	-	98	59.772	Kryptolebias_marmoratus
ENSSLDG00000004385	-	56	33.039	ENSMAMG00000018393	-	51	33.039	Mastacembelus_armatus
ENSSLDG00000004385	-	99	44.274	ENSORLG00000022369	-	66	43.865	Oryzias_latipes
ENSSLDG00000004385	-	97	43.704	ENSORLG00000026546	-	61	43.704	Oryzias_latipes
ENSSLDG00000004385	-	99	41.372	ENSORLG00000024904	-	54	44.242	Oryzias_latipes
ENSSLDG00000004385	-	97	44.093	ENSORLG00000026665	-	61	44.034	Oryzias_latipes
ENSSLDG00000004385	-	93	31.016	ENSORLG00000026873	-	56	30.802	Oryzias_latipes
ENSSLDG00000004385	-	97	42.144	ENSORLG00000024220	-	61	42.144	Oryzias_latipes
ENSSLDG00000004385	-	97	42.100	ENSORLG00000030265	-	61	42.100	Oryzias_latipes
ENSSLDG00000004385	-	97	42.204	ENSORLG00000025739	-	61	42.204	Oryzias_latipes
ENSSLDG00000004385	-	99	44.057	ENSORLG00000028609	-	62	43.648	Oryzias_latipes
ENSSLDG00000004385	-	97	42.204	ENSORLG00000027568	-	61	42.204	Oryzias_latipes
ENSSLDG00000004385	-	97	44.492	ENSORLG00000024233	-	61	44.433	Oryzias_latipes
ENSSLDG00000004385	-	93	30.835	ENSORLG00000026629	-	56	30.514	Oryzias_latipes
ENSSLDG00000004385	-	99	44.276	ENSORLG00000027831	-	64	44.355	Oryzias_latipes
ENSSLDG00000004385	-	99	44.172	ENSORLG00000028795	-	62	43.763	Oryzias_latipes
ENSSLDG00000004385	-	93	30.835	ENSORLG00000023181	-	56	30.621	Oryzias_latipes
ENSSLDG00000004385	-	84	30.481	ENSORLG00000029874	-	52	30.481	Oryzias_latipes
ENSSLDG00000004385	-	99	44.057	ENSORLG00000030542	-	62	43.648	Oryzias_latipes
ENSSLDG00000004385	-	84	30.129	ENSORLG00000029675	-	52	30.012	Oryzias_latipes
ENSSLDG00000004385	-	97	42.204	ENSORLG00020008293	-	61	42.204	Oryzias_latipes_hni
ENSSLDG00000004385	-	85	44.121	ENSORLG00020003869	-	53	44.121	Oryzias_latipes_hni
ENSSLDG00000004385	-	85	44.121	ENSORLG00020020268	-	54	43.879	Oryzias_latipes_hni
ENSSLDG00000004385	-	85	44.000	ENSORLG00020014203	-	53	44.000	Oryzias_latipes_hni
ENSSLDG00000004385	-	85	44.702	ENSORLG00020001422	-	53	44.702	Oryzias_latipes_hni
ENSSLDG00000004385	-	99	44.172	ENSORLG00015018878	-	62	43.763	Oryzias_latipes_hsok
ENSSLDG00000004385	-	99	44.274	ENSORLG00015017778	-	62	43.865	Oryzias_latipes_hsok
ENSSLDG00000004385	-	98	44.674	ENSOMEG00000003712	-	61	44.571	Oryzias_melastigma
ENSSLDG00000004385	-	85	31.308	ENSOMEG00000009987	-	54	31.054	Oryzias_melastigma
ENSSLDG00000004385	-	75	48.303	ENSPSIG00000000994	-	54	48.303	Pelodiscus_sinensis
ENSSLDG00000004385	-	80	36.816	ENSPSIG00000000767	-	55	36.816	Pelodiscus_sinensis
ENSSLDG00000004385	-	85	39.739	ENSPSIG00000000489	-	54	37.589	Pelodiscus_sinensis
ENSSLDG00000004385	-	71	45.152	ENSPMEG00000016355	-	57	45.152	Poecilia_mexicana
ENSSLDG00000004385	-	84	30.662	ENSPREG00000000390	-	52	30.662	Poecilia_reticulata
ENSSLDG00000004385	-	87	46.454	ENSPNAG00000022277	-	95	46.336	Pygocentrus_nattereri
ENSSLDG00000004385	-	74	99.291	ENSSDUG00000002460	-	57	99.291	Seriola_dumerili
ENSSLDG00000004385	-	89	30.684	ENSXMAG00000021213	-	57	30.650	Xiphophorus_maculatus
ENSSLDG00000004385	-	89	30.795	ENSXMAG00000026594	-	57	31.023	Xiphophorus_maculatus
ENSSLDG00000004385	-	85	44.975	ENSXMAG00000030100	-	57	44.975	Xiphophorus_maculatus
ENSSLDG00000004385	-	85	44.853	ENSXMAG00000026031	-	53	44.853	Xiphophorus_maculatus
ENSSLDG00000004385	-	86	31.089	ENSXMAG00000021298	-	52	31.390	Xiphophorus_maculatus
ENSSLDG00000004385	-	86	31.448	ENSXMAG00000023319	-	52	31.448	Xiphophorus_maculatus