EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000004448 (Gene tree)
Gene ID: -
Gene Symbol: cnot6b
Alias: zgc:171797
Full Name: CCR4-NOT transcription complex subunit 6
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 14757 bases
Position: chrPEQF01099449.1:1358860-1373616
Accession: 111646629
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000005607	Exo_endo_phos	PF03372.23	9.6e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000005799	-	6618	XM_023396166	ENSSLDP00000005607	559 (aa)	XP_023251934	UPI000C6FA2BD

Gene Model

Click here to download ENSSLDG00000004448's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000004448's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000004448	cnot6b	100	74.688	ENSSLDG00000000335	cnot6l	100	74.510
ENSSLDG00000004448	cnot6b	59	30.141	ENSSLDG00000021300	-	57	30.704

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000004448	cnot6b	100	86.583	ENSG00000113300	CNOT6	100	94.737	Homo_sapiens
ENSSLDG00000004448	cnot6b	100	98.927	ENSAPOG00000009994	cnot6b	100	98.927	Acanthochromis_polyacanthus
ENSSLDG00000004448	cnot6b	100	86.631	ENSAMEG00000000949	CNOT6	99	85.740	Ailuropoda_melanoleuca
ENSSLDG00000004448	cnot6b	100	96.064	ENSACIG00000016566	cnot6b	100	96.064	Amphilophus_citrinellus
ENSSLDG00000004448	cnot6b	100	98.927	ENSAOCG00000006893	cnot6b	100	98.927	Amphiprion_ocellaris
ENSSLDG00000004448	cnot6b	100	98.927	ENSAPEG00000016949	cnot6b	100	98.927	Amphiprion_percula
ENSSLDG00000004448	cnot6b	100	95.886	ENSATEG00000007862	cnot6b	100	95.886	Anabas_testudineus
ENSSLDG00000004448	cnot6b	100	87.120	ENSAPLG00000012715	CNOT6	99	86.583	Anas_platyrhynchos
ENSSLDG00000004448	cnot6b	100	86.941	ENSACAG00000016548	CNOT6	100	85.868	Anolis_carolinensis
ENSSLDG00000004448	cnot6b	100	86.583	ENSANAG00000030436	CNOT6	96	85.689	Aotus_nancymaae
ENSSLDG00000004448	cnot6b	100	96.959	ENSACLG00000008279	cnot6b	100	96.959	Astatotilapia_calliptera
ENSSLDG00000004448	cnot6b	100	90.161	ENSAMXG00000034694	cnot6b	100	89.088	Astyanax_mexicanus
ENSSLDG00000004448	cnot6b	100	91.234	ENSAMXG00000019140	cnot6a	100	91.055	Astyanax_mexicanus
ENSSLDG00000004448	cnot6b	100	86.941	ENSBTAG00000017362	CNOT6	100	86.047	Bos_taurus
ENSSLDG00000004448	cnot6b	100	86.404	ENSCJAG00000009795	CNOT6	100	85.510	Callithrix_jacchus
ENSSLDG00000004448	cnot6b	100	86.941	ENSCAFG00000000464	CNOT6	100	86.047	Canis_familiaris
ENSSLDG00000004448	cnot6b	100	86.941	ENSCAFG00020002441	CNOT6	100	86.047	Canis_lupus_dingo
ENSSLDG00000004448	cnot6b	100	86.762	ENSCHIG00000019100	CNOT6	100	85.868	Capra_hircus
ENSSLDG00000004448	cnot6b	100	85.331	ENSTSYG00000003982	CNOT6	100	84.436	Carlito_syrichta
ENSSLDG00000004448	cnot6b	100	81.932	ENSCPOG00000035657	CNOT6	100	81.038	Cavia_porcellus
ENSSLDG00000004448	cnot6b	100	82.111	ENSCCAG00000033670	CNOT6	100	81.216	Cebus_capucinus
ENSSLDG00000004448	cnot6b	100	86.583	ENSCATG00000042014	CNOT6	100	85.689	Cercocebus_atys
ENSSLDG00000004448	cnot6b	100	85.510	ENSCLAG00000010489	CNOT6	100	84.615	Chinchilla_lanigera
ENSSLDG00000004448	cnot6b	100	86.583	ENSCSAG00000008165	CNOT6	100	85.689	Chlorocebus_sabaeus
ENSSLDG00000004448	cnot6b	100	86.225	ENSCHOG00000009680	CNOT6	100	85.689	Choloepus_hoffmanni
ENSSLDG00000004448	cnot6b	100	87.299	ENSCPBG00000008908	CNOT6	100	86.762	Chrysemys_picta_bellii
ENSSLDG00000004448	cnot6b	100	86.762	ENSCANG00000026756	CNOT6	100	85.868	Colobus_angolensis_palliatus
ENSSLDG00000004448	cnot6b	100	85.152	ENSCGRG00001011452	Cnot6	100	84.258	Cricetulus_griseus_chok1gshd
ENSSLDG00000004448	cnot6b	100	83.184	ENSCGRG00000010407	Cnot6	100	82.290	Cricetulus_griseus_crigri
ENSSLDG00000004448	cnot6b	100	98.032	ENSCSEG00000010939	cnot6b	100	98.032	Cynoglossus_semilaevis
ENSSLDG00000004448	cnot6b	100	96.064	ENSCVAG00000010538	cnot6b	100	96.064	Cyprinodon_variegatus
ENSSLDG00000004448	cnot6b	100	90.519	ENSDARG00000008255	cnot6a	100	90.340	Danio_rerio
ENSSLDG00000004448	cnot6b	100	89.267	ENSDARG00000101072	cnot6b	100	89.088	Danio_rerio
ENSSLDG00000004448	cnot6b	100	87.299	ENSDNOG00000041644	CNOT6	100	86.404	Dasypus_novemcinctus
ENSSLDG00000004448	cnot6b	100	77.818	ENSDORG00000001708	Cnot6	100	76.923	Dipodomys_ordii
ENSSLDG00000004448	cnot6b	100	69.643	ENSETEG00000006975	CNOT6	100	68.750	Echinops_telfairi
ENSSLDG00000004448	cnot6b	90	81.673	ENSEASG00005012957	-	99	80.876	Equus_asinus_asinus
ENSSLDG00000004448	cnot6b	100	86.762	ENSEASG00005012794	-	100	85.868	Equus_asinus_asinus
ENSSLDG00000004448	cnot6b	100	87.299	ENSECAG00000019325	CNOT6	100	86.404	Equus_caballus
ENSSLDG00000004448	cnot6b	100	81.932	ENSECAG00000012704	-	99	81.038	Equus_caballus
ENSSLDG00000004448	cnot6b	100	85.868	ENSEEUG00000015382	CNOT6	100	84.973	Erinaceus_europaeus
ENSSLDG00000004448	cnot6b	100	89.594	ENSELUG00000015981	cnot6b	99	88.536	Esox_lucius
ENSSLDG00000004448	cnot6b	100	87.835	ENSELUG00000024580	cnot6a	100	87.299	Esox_lucius
ENSSLDG00000004448	cnot6b	100	87.120	ENSFCAG00000001881	CNOT6	100	86.225	Felis_catus
ENSSLDG00000004448	cnot6b	100	87.299	ENSFALG00000007699	CNOT6	100	86.762	Ficedula_albicollis
ENSSLDG00000004448	cnot6b	100	84.973	ENSFDAG00000001999	CNOT6	100	84.079	Fukomys_damarensis
ENSSLDG00000004448	cnot6b	68	95.000	ENSFHEG00000013756	cnot6b	99	95.000	Fundulus_heteroclitus
ENSSLDG00000004448	cnot6b	95	95.085	ENSGMOG00000009767	cnot6b	99	95.085	Gadus_morhua
ENSSLDG00000004448	cnot6b	100	87.120	ENSGALG00000034316	CNOT6	100	86.583	Gallus_gallus
ENSSLDG00000004448	cnot6b	100	96.422	ENSGAFG00000008525	cnot6b	100	96.422	Gambusia_affinis
ENSSLDG00000004448	cnot6b	95	94.140	ENSGACG00000018046	cnot6b	99	94.140	Gasterosteus_aculeatus
ENSSLDG00000004448	cnot6b	100	71.786	ENSGAGG00000012176	CNOT6	100	71.250	Gopherus_agassizii
ENSSLDG00000004448	cnot6b	100	86.583	ENSGGOG00000003675	CNOT6	100	85.689	Gorilla_gorilla
ENSSLDG00000004448	cnot6b	100	97.138	ENSHBUG00000002819	cnot6b	100	97.138	Haplochromis_burtoni
ENSSLDG00000004448	cnot6b	100	85.331	ENSHGLG00000017756	CNOT6	100	84.436	Heterocephalus_glaber_female
ENSSLDG00000004448	cnot6b	100	85.331	ENSHGLG00100005747	CNOT6	100	84.436	Heterocephalus_glaber_male
ENSSLDG00000004448	cnot6b	100	96.422	ENSHCOG00000016176	cnot6b	100	96.422	Hippocampus_comes
ENSSLDG00000004448	cnot6b	100	90.340	ENSIPUG00000019831	cnot6a	100	90.340	Ictalurus_punctatus
ENSSLDG00000004448	cnot6b	100	90.519	ENSIPUG00000017482	cnot6b	100	89.624	Ictalurus_punctatus
ENSSLDG00000004448	cnot6b	100	86.404	ENSSTOG00000002803	CNOT6	100	85.510	Ictidomys_tridecemlineatus
ENSSLDG00000004448	cnot6b	100	86.047	ENSJJAG00000012296	Cnot6	100	85.152	Jaculus_jaculus
ENSSLDG00000004448	cnot6b	100	96.064	ENSKMAG00000004640	cnot6b	100	96.064	Kryptolebias_marmoratus
ENSSLDG00000004448	cnot6b	100	97.496	ENSLBEG00000027917	cnot6b	100	97.496	Labrus_bergylta
ENSSLDG00000004448	cnot6b	100	94.275	ENSLOCG00000010102	cnot6b	99	93.560	Lepisosteus_oculatus
ENSSLDG00000004448	cnot6b	100	87.299	ENSLAFG00000016742	CNOT6	100	86.404	Loxodonta_africana
ENSSLDG00000004448	cnot6b	100	86.583	ENSMFAG00000030867	CNOT6	100	85.689	Macaca_fascicularis
ENSSLDG00000004448	cnot6b	100	86.583	ENSMMUG00000018690	CNOT6	100	85.689	Macaca_mulatta
ENSSLDG00000004448	cnot6b	100	86.583	ENSMNEG00000038565	CNOT6	100	85.689	Macaca_nemestrina
ENSSLDG00000004448	cnot6b	100	86.583	ENSMLEG00000010555	CNOT6	100	85.689	Mandrillus_leucophaeus
ENSSLDG00000004448	cnot6b	100	99.284	ENSMAMG00000007515	cnot6b	100	99.284	Mastacembelus_armatus
ENSSLDG00000004448	cnot6b	100	96.959	ENSMZEG00005012899	cnot6b	100	96.959	Maylandia_zebra
ENSSLDG00000004448	cnot6b	100	85.868	ENSMAUG00000019798	Cnot6	100	84.973	Mesocricetus_auratus
ENSSLDG00000004448	cnot6b	98	78.388	ENSMICG00000028378	-	99	77.473	Microcebus_murinus
ENSSLDG00000004448	cnot6b	100	84.794	ENSMICG00000013018	-	100	83.900	Microcebus_murinus
ENSSLDG00000004448	cnot6b	100	85.868	ENSMOCG00000021662	Cnot6	100	84.973	Microtus_ochrogaster
ENSSLDG00000004448	cnot6b	100	94.275	ENSMMOG00000003227	cnot6b	100	94.275	Mola_mola
ENSSLDG00000004448	cnot6b	100	86.583	ENSMODG00000003979	CNOT6	100	86.047	Monodelphis_domestica
ENSSLDG00000004448	cnot6b	100	98.748	ENSMALG00000014251	cnot6b	100	98.748	Monopterus_albus
ENSSLDG00000004448	cnot6b	100	86.047	MGP_CAROLIEiJ_G0016277	Cnot6	100	85.152	Mus_caroli
ENSSLDG00000004448	cnot6b	100	86.047	ENSMUSG00000020362	Cnot6	100	85.152	Mus_musculus
ENSSLDG00000004448	cnot6b	100	86.047	MGP_PahariEiJ_G0017413	Cnot6	100	85.152	Mus_pahari
ENSSLDG00000004448	cnot6b	100	86.047	MGP_SPRETEiJ_G0017122	Cnot6	100	85.152	Mus_spretus
ENSSLDG00000004448	cnot6b	100	87.299	ENSMPUG00000000587	CNOT6	96	86.404	Mustela_putorius_furo
ENSSLDG00000004448	cnot6b	100	85.461	ENSMLUG00000010257	CNOT6	100	84.574	Myotis_lucifugus
ENSSLDG00000004448	cnot6b	100	85.152	ENSNGAG00000008269	Cnot6	100	84.615	Nannospalax_galili
ENSSLDG00000004448	cnot6b	100	97.138	ENSNBRG00000010798	cnot6b	100	97.138	Neolamprologus_brichardi
ENSSLDG00000004448	cnot6b	100	85.510	ENSNLEG00000002322	CNOT6	100	84.615	Nomascus_leucogenys
ENSSLDG00000004448	cnot6b	81	83.796	ENSMEUG00000000025	CNOT6	81	82.407	Notamacropus_eugenii
ENSSLDG00000004448	cnot6b	88	86.667	ENSOPRG00000008244	-	88	86.667	Ochotona_princeps
ENSSLDG00000004448	cnot6b	100	84.973	ENSODEG00000007041	CNOT6	100	84.079	Octodon_degus
ENSSLDG00000004448	cnot6b	75	95.981	ENSONIG00000013027	cnot6b	99	95.981	Oreochromis_niloticus
ENSSLDG00000004448	cnot6b	100	86.762	ENSOANG00000010226	CNOT6	100	85.868	Ornithorhynchus_anatinus
ENSSLDG00000004448	cnot6b	100	85.561	ENSOCUG00000011083	CNOT6	100	84.670	Oryctolagus_cuniculus
ENSSLDG00000004448	cnot6b	100	97.138	ENSORLG00000005059	cnot6b	100	97.138	Oryzias_latipes
ENSSLDG00000004448	cnot6b	100	97.138	ENSORLG00020012784	cnot6b	100	97.138	Oryzias_latipes_hni
ENSSLDG00000004448	cnot6b	94	96.750	ENSORLG00015022658	cnot6b	98	96.750	Oryzias_latipes_hsok
ENSSLDG00000004448	cnot6b	100	97.674	ENSOMEG00000005295	cnot6b	100	97.674	Oryzias_melastigma
ENSSLDG00000004448	cnot6b	94	85.741	ENSOGAG00000032470	CNOT6	100	84.791	Otolemur_garnettii
ENSSLDG00000004448	cnot6b	97	86.213	ENSOARG00000001003	CNOT6	100	85.294	Ovis_aries
ENSSLDG00000004448	cnot6b	100	86.583	ENSPPAG00000032253	CNOT6	100	85.689	Pan_paniscus
ENSSLDG00000004448	cnot6b	100	86.941	ENSPPRG00000011912	CNOT6	100	86.047	Panthera_pardus
ENSSLDG00000004448	cnot6b	100	86.941	ENSPTIG00000016794	CNOT6	100	86.047	Panthera_tigris_altaica
ENSSLDG00000004448	cnot6b	100	86.583	ENSPTRG00000017636	CNOT6	100	85.689	Pan_troglodytes
ENSSLDG00000004448	cnot6b	100	86.583	ENSPANG00000016191	CNOT6	100	85.689	Papio_anubis
ENSSLDG00000004448	cnot6b	100	91.055	ENSPKIG00000021368	cnot6b	100	90.340	Paramormyrops_kingsleyae
ENSSLDG00000004448	cnot6b	98	87.179	ENSPSIG00000017307	CNOT6	100	86.630	Pelodiscus_sinensis
ENSSLDG00000004448	cnot6b	100	97.138	ENSPMGG00000011238	cnot6b	100	97.138	Periophthalmus_magnuspinnatus
ENSSLDG00000004448	cnot6b	100	85.152	ENSPEMG00000000627	Cnot6	100	84.615	Peromyscus_maniculatus_bairdii
ENSSLDG00000004448	cnot6b	100	86.583	ENSPCIG00000020319	CNOT6	99	86.047	Phascolarctos_cinereus
ENSSLDG00000004448	cnot6b	100	96.780	ENSPFOG00000006291	cnot6b	100	96.780	Poecilia_formosa
ENSSLDG00000004448	cnot6b	100	93.023	ENSPLAG00000008266	cnot6b	100	93.023	Poecilia_latipinna
ENSSLDG00000004448	cnot6b	100	96.959	ENSPMEG00000009091	cnot6b	100	96.959	Poecilia_mexicana
ENSSLDG00000004448	cnot6b	100	94.991	ENSPREG00000003713	cnot6b	100	94.991	Poecilia_reticulata
ENSSLDG00000004448	cnot6b	100	86.583	ENSPPYG00000016137	CNOT6	100	85.689	Pongo_abelii
ENSSLDG00000004448	cnot6b	71	85.075	ENSPCAG00000005599	-	59	94.595	Procavia_capensis
ENSSLDG00000004448	cnot6b	100	80.859	ENSPCOG00000017359	CNOT6	100	80.680	Propithecus_coquereli
ENSSLDG00000004448	cnot6b	100	83.542	ENSPVAG00000003069	CNOT6	100	82.648	Pteropus_vampyrus
ENSSLDG00000004448	cnot6b	100	96.780	ENSPNYG00000000321	cnot6b	100	96.780	Pundamilia_nyererei
ENSSLDG00000004448	cnot6b	100	91.592	ENSPNAG00000029586	cnot6a	100	91.413	Pygocentrus_nattereri
ENSSLDG00000004448	cnot6b	100	91.055	ENSPNAG00000028816	cnot6b	100	90.161	Pygocentrus_nattereri
ENSSLDG00000004448	cnot6b	100	85.510	ENSRNOG00000054891	Cnot6	100	84.615	Rattus_norvegicus
ENSSLDG00000004448	cnot6b	100	86.404	ENSRBIG00000004309	CNOT6	100	85.510	Rhinopithecus_bieti
ENSSLDG00000004448	cnot6b	100	86.404	ENSRROG00000035378	CNOT6	100	85.510	Rhinopithecus_roxellana
ENSSLDG00000004448	cnot6b	100	86.762	ENSSBOG00000030494	CNOT6	100	86.047	Saimiri_boliviensis_boliviensis
ENSSLDG00000004448	cnot6b	100	86.583	ENSSHAG00000017436	CNOT6	100	86.047	Sarcophilus_harrisii
ENSSLDG00000004448	cnot6b	100	93.560	ENSSFOG00015015133	CNOT6	100	93.023	Scleropages_formosus
ENSSLDG00000004448	cnot6b	100	91.592	ENSSFOG00015022383	cnot6a	96	90.698	Scleropages_formosus
ENSSLDG00000004448	cnot6b	100	97.496	ENSSMAG00000003084	cnot6b	100	97.496	Scophthalmus_maximus
ENSSLDG00000004448	cnot6b	100	99.821	ENSSDUG00000004151	cnot6b	100	99.821	Seriola_dumerili
ENSSLDG00000004448	cnot6b	64	67.967	ENSSARG00000012650	-	100	67.967	Sorex_araneus
ENSSLDG00000004448	cnot6b	100	86.941	ENSSPUG00000007893	CNOT6	100	86.404	Sphenodon_punctatus
ENSSLDG00000004448	cnot6b	100	99.106	ENSSPAG00000000149	cnot6b	100	99.106	Stegastes_partitus
ENSSLDG00000004448	cnot6b	100	86.762	ENSSSCG00000014009	CNOT6	100	85.868	Sus_scrofa
ENSSLDG00000004448	cnot6b	100	86.941	ENSTGUG00000001119	CNOT6	100	86.404	Taeniopygia_guttata
ENSSLDG00000004448	cnot6b	100	93.560	ENSTRUG00000002818	cnot6b	100	93.023	Takifugu_rubripes
ENSSLDG00000004448	cnot6b	100	94.633	ENSTNIG00000004443	cnot6b	99	94.097	Tetraodon_nigroviridis
ENSSLDG00000004448	cnot6b	76	77.612	ENSTBEG00000017094	-	87	77.612	Tupaia_belangeri
ENSSLDG00000004448	cnot6b	100	86.583	ENSTTRG00000009363	CNOT6	100	85.689	Tursiops_truncatus
ENSSLDG00000004448	cnot6b	90	76.190	ENSUAMG00000004579	CNOT6	99	75.198	Ursus_americanus
ENSSLDG00000004448	cnot6b	100	82.765	ENSUMAG00000024577	CNOT6	100	81.911	Ursus_maritimus
ENSSLDG00000004448	cnot6b	84	91.892	ENSVPAG00000003593	CNOT6	83	91.892	Vicugna_pacos
ENSSLDG00000004448	cnot6b	100	86.941	ENSVVUG00000026940	CNOT6	100	86.047	Vulpes_vulpes
ENSSLDG00000004448	cnot6b	100	93.381	ENSXCOG00000003360	cnot6b	100	93.381	Xiphophorus_couchianus
ENSSLDG00000004448	cnot6b	100	96.959	ENSXMAG00000008730	cnot6b	100	96.959	Xiphophorus_maculatus