EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000004513 (Gene tree)
Gene ID: -
Gene Symbol: ddx28
Alias: zgc:153386
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 28
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 3988 bases
Position: chrPEQF01098953.1:1822521-1826508
Accession: ZDB-GENE-061013-64
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000005643	DEAD	PF00270.29	2.8e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000005835	-	1704	-	ENSSLDP00000005643	567 (aa)	-	-

Gene Model

Click here to download ENSSLDG00000004513's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000004513's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000004513	ddx28	72	30.637	ENSSLDG00000018142	ddx47	76	30.637
ENSSLDG00000004513	ddx28	64	32.787	ENSSLDG00000025345	ddx1	57	32.787

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000004513	ddx28	89	46.796	ENSG00000182810	DDX28	94	47.379	Homo_sapiens
ENSSLDG00000004513	ddx28	99	79.754	ENSAPOG00000000991	ddx28	98	79.894	Acanthochromis_polyacanthus
ENSSLDG00000004513	ddx28	89	46.887	ENSAMEG00000019426	DDX28	94	47.471	Ailuropoda_melanoleuca
ENSSLDG00000004513	ddx28	99	81.028	ENSACIG00000021615	ddx28	99	81.028	Amphilophus_citrinellus
ENSSLDG00000004513	ddx28	99	80.776	ENSAOCG00000004610	ddx28	98	80.776	Amphiprion_ocellaris
ENSSLDG00000004513	ddx28	99	80.776	ENSAPEG00000002143	ddx28	98	80.776	Amphiprion_percula
ENSSLDG00000004513	ddx28	99	81.690	ENSATEG00000018691	ddx28	100	81.690	Anabas_testudineus
ENSSLDG00000004513	ddx28	89	45.205	ENSACAG00000009755	DDX28	93	45.205	Anolis_carolinensis
ENSSLDG00000004513	ddx28	98	76.344	ENSACLG00000012984	ddx28	99	76.344	Astatotilapia_calliptera
ENSSLDG00000004513	ddx28	99	59.655	ENSAMXG00000005878	ddx28	100	59.655	Astyanax_mexicanus
ENSSLDG00000004513	ddx28	89	47.358	ENSBTAG00000004290	DDX28	92	47.358	Bos_taurus
ENSSLDG00000004513	ddx28	92	45.301	ENSCAFG00000020327	DDX28	98	45.865	Canis_familiaris
ENSSLDG00000004513	ddx28	92	45.301	ENSCAFG00020019785	DDX28	98	45.865	Canis_lupus_dingo
ENSSLDG00000004513	ddx28	89	47.647	ENSCHIG00000009658	DDX28	92	47.647	Capra_hircus
ENSSLDG00000004513	ddx28	89	48.047	ENSCPOG00000013746	DDX28	94	48.047	Cavia_porcellus
ENSSLDG00000004513	ddx28	89	47.665	ENSCSAG00000018472	DDX28	92	47.665	Chlorocebus_sabaeus
ENSSLDG00000004513	ddx28	81	49.676	ENSCPBG00000012105	DDX28	85	48.554	Chrysemys_picta_bellii
ENSSLDG00000004513	ddx28	66	36.364	ENSCSAVG00000006341	-	98	36.883	Ciona_savignyi
ENSSLDG00000004513	ddx28	86	47.782	ENSCGRG00001024412	Ddx28	93	48.089	Cricetulus_griseus_chok1gshd
ENSSLDG00000004513	ddx28	98	71.454	ENSCSEG00000011651	ddx28	99	71.454	Cynoglossus_semilaevis
ENSSLDG00000004513	ddx28	99	73.768	ENSCVAG00000004044	ddx28	100	73.768	Cyprinodon_variegatus
ENSSLDG00000004513	ddx28	98	62.745	ENSDARG00000060411	ddx28	98	62.745	Danio_rerio
ENSSLDG00000004513	ddx28	64	54.472	ENSDNOG00000033593	DDX28	99	54.472	Dasypus_novemcinctus
ENSSLDG00000004513	ddx28	84	47.959	ENSDORG00000028868	Ddx28	93	46.911	Dipodomys_ordii
ENSSLDG00000004513	ddx28	82	36.989	FBgn0086130	Dbp21E2	84	36.989	Drosophila_melanogaster
ENSSLDG00000004513	ddx28	89	47.767	ENSETEG00000001062	-	93	47.767	Echinops_telfairi
ENSSLDG00000004513	ddx28	72	42.857	ENSEBUG00000004791	ddx28	76	41.346	Eptatretus_burgeri
ENSSLDG00000004513	ddx28	89	47.195	ENSEASG00005020387	DDX28	93	47.471	Equus_asinus_asinus
ENSSLDG00000004513	ddx28	89	47.389	ENSECAG00000006451	DDX28	93	47.665	Equus_caballus
ENSSLDG00000004513	ddx28	72	41.007	ENSEEUG00000005017	DDX28	95	41.727	Erinaceus_europaeus
ENSSLDG00000004513	ddx28	90	70.039	ENSELUG00000005302	ddx28	99	69.157	Esox_lucius
ENSSLDG00000004513	ddx28	89	48.643	ENSFCAG00000012858	DDX28	94	48.643	Felis_catus
ENSSLDG00000004513	ddx28	99	71.605	ENSFHEG00000012573	ddx28	99	71.605	Fundulus_heteroclitus
ENSSLDG00000004513	ddx28	92	70.169	ENSGMOG00000017045	ddx28	99	70.356	Gadus_morhua
ENSSLDG00000004513	ddx28	90	43.726	ENSGALG00000048700	DDX28	89	43.643	Gallus_gallus
ENSSLDG00000004513	ddx28	98	73.929	ENSGAFG00000009249	ddx28	99	73.929	Gambusia_affinis
ENSSLDG00000004513	ddx28	95	78.399	ENSGACG00000016367	ddx28	99	78.399	Gasterosteus_aculeatus
ENSSLDG00000004513	ddx28	79	46.563	ENSGAGG00000004565	DDX28	98	46.563	Gopherus_agassizii
ENSSLDG00000004513	ddx28	89	46.990	ENSGGOG00000001220	DDX28	94	47.573	Gorilla_gorilla
ENSSLDG00000004513	ddx28	98	79.749	ENSHBUG00000001016	ddx28	99	79.749	Haplochromis_burtoni
ENSSLDG00000004513	ddx28	98	71.377	ENSHCOG00000017590	ddx28	98	71.377	Hippocampus_comes
ENSSLDG00000004513	ddx28	99	60.908	ENSIPUG00000017350	Ddx28	100	60.908	Ictalurus_punctatus
ENSSLDG00000004513	ddx28	95	46.533	ENSSTOG00000002064	DDX28	99	46.533	Ictidomys_tridecemlineatus
ENSSLDG00000004513	ddx28	89	47.379	ENSJJAG00000012460	-	93	47.379	Jaculus_jaculus
ENSSLDG00000004513	ddx28	99	73.545	ENSKMAG00000018183	ddx28	99	73.545	Kryptolebias_marmoratus
ENSSLDG00000004513	ddx28	98	79.255	ENSLBEG00000006072	ddx28	99	79.255	Labrus_bergylta
ENSSLDG00000004513	ddx28	95	54.815	ENSLACG00000005578	DDX28	93	54.815	Latimeria_chalumnae
ENSSLDG00000004513	ddx28	90	61.868	ENSLOCG00000017604	ddx28	91	61.868	Lepisosteus_oculatus
ENSSLDG00000004513	ddx28	89	48.450	ENSLAFG00000031239	DDX28	93	48.450	Loxodonta_africana
ENSSLDG00000004513	ddx28	89	47.665	ENSMMUG00000010836	DDX28	92	47.665	Macaca_mulatta
ENSSLDG00000004513	ddx28	98	77.718	ENSMAMG00000020220	ddx28	98	77.718	Mastacembelus_armatus
ENSSLDG00000004513	ddx28	98	79.928	ENSMZEG00005009292	ddx28	99	79.928	Maylandia_zebra
ENSSLDG00000004513	ddx28	89	38.132	ENSMICG00000012346	-	93	38.132	Microcebus_murinus
ENSSLDG00000004513	ddx28	89	48.148	ENSMOCG00000009815	Ddx28	93	48.148	Microtus_ochrogaster
ENSSLDG00000004513	ddx28	99	76.377	ENSMMOG00000000270	ddx28	100	76.377	Mola_mola
ENSSLDG00000004513	ddx28	89	48.235	ENSMODG00000005303	DDX28	92	48.824	Monodelphis_domestica
ENSSLDG00000004513	ddx28	99	79.012	ENSMALG00000008864	ddx28	99	79.012	Monopterus_albus
ENSSLDG00000004513	ddx28	89	47.379	MGP_CAROLIEiJ_G0031510	Ddx28	93	47.379	Mus_caroli
ENSSLDG00000004513	ddx28	89	47.379	ENSMUSG00000045538	Ddx28	93	47.379	Mus_musculus
ENSSLDG00000004513	ddx28	89	47.184	MGP_PahariEiJ_G0023110	Ddx28	93	47.184	Mus_pahari
ENSSLDG00000004513	ddx28	89	47.573	MGP_SPRETEiJ_G0032628	Ddx28	93	47.573	Mus_spretus
ENSSLDG00000004513	ddx28	65	50.402	ENSMPUG00000006915	DDX28	92	50.402	Mustela_putorius_furo
ENSSLDG00000004513	ddx28	93	45.996	ENSMLUG00000005899	DDX28	98	46.369	Myotis_lucifugus
ENSSLDG00000004513	ddx28	89	48.456	ENSNGAG00000015762	Ddx28	93	48.263	Nannospalax_galili
ENSSLDG00000004513	ddx28	98	79.892	ENSNBRG00000001337	ddx28	100	79.892	Neolamprologus_brichardi
ENSSLDG00000004513	ddx28	99	80.214	ENSONIG00000020597	ddx28	99	80.214	Oreochromis_niloticus
ENSSLDG00000004513	ddx28	51	52.740	ENSOANG00000003551	-	98	53.357	Ornithorhynchus_anatinus
ENSSLDG00000004513	ddx28	89	48.047	ENSOCUG00000023074	DDX28	93	48.047	Oryctolagus_cuniculus
ENSSLDG00000004513	ddx28	98	74.159	ENSORLG00000011968	ddx28	99	74.159	Oryzias_latipes
ENSSLDG00000004513	ddx28	98	74.464	ENSORLG00020001951	ddx28	99	74.464	Oryzias_latipes_hni
ENSSLDG00000004513	ddx28	98	75.179	ENSORLG00015023030	ddx28	99	75.179	Oryzias_latipes_hsok
ENSSLDG00000004513	ddx28	99	74.165	ENSOMEG00000012445	ddx28	99	74.165	Oryzias_melastigma
ENSSLDG00000004513	ddx28	89	48.084	ENSOGAG00000016895	DDX28	94	48.084	Otolemur_garnettii
ENSSLDG00000004513	ddx28	78	46.102	ENSOARG00000003313	DDX28	99	46.102	Ovis_aries
ENSSLDG00000004513	ddx28	89	45.224	ENSPPAG00000036971	DDX28	93	45.224	Pan_paniscus
ENSSLDG00000004513	ddx28	89	48.643	ENSPPRG00000018322	DDX28	94	48.643	Panthera_pardus
ENSSLDG00000004513	ddx28	89	47.093	ENSPTIG00000006444	DDX28	94	47.093	Panthera_tigris_altaica
ENSSLDG00000004513	ddx28	89	47.379	ENSPTRG00000008258	DDX28	94	47.379	Pan_troglodytes
ENSSLDG00000004513	ddx28	93	64.540	ENSPKIG00000021200	ddx28	98	64.540	Paramormyrops_kingsleyae
ENSSLDG00000004513	ddx28	50	56.643	ENSPSIG00000001127	DDX28	95	56.643	Pelodiscus_sinensis
ENSSLDG00000004513	ddx28	96	69.835	ENSPMGG00000007908	ddx28	97	69.835	Periophthalmus_magnuspinnatus
ENSSLDG00000004513	ddx28	89	46.990	ENSPEMG00000003395	Ddx28	93	46.990	Peromyscus_maniculatus_bairdii
ENSSLDG00000004513	ddx28	98	74.199	ENSPFOG00000020952	ddx28	98	74.199	Poecilia_formosa
ENSSLDG00000004513	ddx28	98	74.199	ENSPFOG00000020838	DDX28	99	74.199	Poecilia_formosa
ENSSLDG00000004513	ddx28	98	73.665	ENSPLAG00000016292	ddx28	98	73.665	Poecilia_latipinna
ENSSLDG00000004513	ddx28	98	74.199	ENSPMEG00000011311	ddx28	97	74.199	Poecilia_mexicana
ENSSLDG00000004513	ddx28	98	74.021	ENSPREG00000002899	ddx28	98	74.021	Poecilia_reticulata
ENSSLDG00000004513	ddx28	89	47.070	ENSPPYG00000007481	DDX28	94	47.656	Pongo_abelii
ENSSLDG00000004513	ddx28	89	47.563	ENSPCOG00000024632	DDX28	93	47.563	Propithecus_coquereli
ENSSLDG00000004513	ddx28	98	79.928	ENSPNYG00000018804	ddx28	99	79.928	Pundamilia_nyererei
ENSSLDG00000004513	ddx28	91	62.977	ENSPNAG00000014597	ddx28	96	62.977	Pygocentrus_nattereri
ENSSLDG00000004513	ddx28	89	46.990	ENSRNOG00000019817	Ddx28	93	46.990	Rattus_norvegicus
ENSSLDG00000004513	ddx28	89	63.922	ENSSFOG00015010181	ddx28	92	63.922	Scleropages_formosus
ENSSLDG00000004513	ddx28	91	83.591	ENSSMAG00000006831	ddx28	97	83.591	Scophthalmus_maximus
ENSSLDG00000004513	ddx28	100	98.765	ENSSDUG00000003257	ddx28	100	98.765	Seriola_dumerili
ENSSLDG00000004513	ddx28	89	47.656	ENSSARG00000014169	DDX28	93	48.047	Sorex_araneus
ENSSLDG00000004513	ddx28	99	79.894	ENSSPAG00000000988	ddx28	99	79.894	Stegastes_partitus
ENSSLDG00000004513	ddx28	89	46.990	ENSSSCG00000026038	DDX28	93	47.184	Sus_scrofa
ENSSLDG00000004513	ddx28	99	70.442	ENSTRUG00000007815	ddx28	100	70.442	Takifugu_rubripes
ENSSLDG00000004513	ddx28	89	74.556	ENSTNIG00000011352	ddx28	100	74.556	Tetraodon_nigroviridis
ENSSLDG00000004513	ddx28	72	60.094	ENSTBEG00000017695	DDX28	81	60.094	Tupaia_belangeri
ENSSLDG00000004513	ddx28	89	46.796	ENSUAMG00000016116	DDX28	94	47.379	Ursus_americanus
ENSSLDG00000004513	ddx28	77	48.764	ENSUMAG00000019200	DDX28	89	49.438	Ursus_maritimus
ENSSLDG00000004513	ddx28	76	40.498	ENSVVUG00000012876	DDX28	85	41.176	Vulpes_vulpes
ENSSLDG00000004513	ddx28	90	46.680	ENSXETG00000005435	ddx28	99	46.680	Xenopus_tropicalis
ENSSLDG00000004513	ddx28	96	74.909	ENSXCOG00000012364	ddx28	96	74.909	Xiphophorus_couchianus
ENSSLDG00000004513	ddx28	91	77.606	ENSXMAG00000019603	ddx28	93	77.606	Xiphophorus_maculatus