EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000004516 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: mRNA decay activator protein ZFP36L2-like
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 990 bases
Position: chrPEQF01008252.1:498-1487
Accession: 111648625
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000005639	zf-CCCH	PF00642.24	5.6e-32	1	4
ENSSLDP00000005639	zf-CCCH	PF00642.24	5.6e-32	2	4
ENSSLDP00000005639	zf-CCCH	PF00642.24	5.6e-32	3	4
ENSSLDP00000005639	zf-CCCH	PF00642.24	5.6e-32	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000005831	-	990	XM_023398414	ENSSLDP00000005639	329 (aa)	XP_023254182	-

Gene Model

Click here to download ENSSLDG00000004516's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000004516's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000004516	-	100	99.392	ENSSLDG00000012760	cth1	100	99.392
ENSSLDG00000004516	-	99	100.000	ENSSLDG00000010023	-	100	100.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000004516	-	90	71.477	ENSAPOG00000012552	cth1	95	71.959	Acanthochromis_polyacanthus
ENSSLDG00000004516	-	87	64.808	ENSACIG00000016026	cth1	100	66.369	Amphilophus_citrinellus
ENSSLDG00000004516	-	100	74.622	ENSAOCG00000001644	cth1	100	75.076	Amphiprion_ocellaris
ENSSLDG00000004516	-	100	74.622	ENSAPEG00000008930	cth1	100	75.076	Amphiprion_percula
ENSSLDG00000004516	-	99	81.155	ENSATEG00000002281	cth1	97	78.419	Anabas_testudineus
ENSSLDG00000004516	-	90	62.963	ENSACLG00000015353	cth1	95	62.333	Astatotilapia_calliptera
ENSSLDG00000004516	-	97	57.927	ENSAMXG00000025717	cth1	92	57.419	Astyanax_mexicanus
ENSSLDG00000004516	-	100	73.193	ENSCSEG00000014617	cth1	100	74.096	Cynoglossus_semilaevis
ENSSLDG00000004516	-	100	61.631	ENSCVAG00000001680	cth1	65	61.515	Cyprinodon_variegatus
ENSSLDG00000004516	-	91	58.442	ENSDARG00000057328	cth1	90	58.252	Danio_rerio
ENSSLDG00000004516	-	99	58.501	ENSELUG00000012738	cth1	99	55.977	Esox_lucius
ENSSLDG00000004516	-	100	64.134	ENSFHEG00000022665	cth1	100	62.006	Fundulus_heteroclitus
ENSSLDG00000004516	-	99	65.465	ENSGMOG00000007360	cth1	100	64.865	Gadus_morhua
ENSSLDG00000004516	-	100	61.398	ENSGAFG00000019288	cth1	100	60.182	Gambusia_affinis
ENSSLDG00000004516	-	99	70.732	ENSGACG00000000802	cth1	99	70.122	Gasterosteus_aculeatus
ENSSLDG00000004516	-	100	64.134	ENSHBUG00000014400	cth1	100	63.253	Haplochromis_burtoni
ENSSLDG00000004516	-	98	51.692	ENSHCOG00000010276	cth1	98	49.846	Hippocampus_comes
ENSSLDG00000004516	-	97	59.327	ENSIPUG00000018040	cth1	90	57.051	Ictalurus_punctatus
ENSSLDG00000004516	-	100	65.957	ENSKMAG00000005944	cth1	100	65.350	Kryptolebias_marmoratus
ENSSLDG00000004516	-	100	81.571	ENSLBEG00000019253	cth1	100	81.571	Labrus_bergylta
ENSSLDG00000004516	-	67	49.107	ENSLOCG00000002047	cth1	82	55.249	Lepisosteus_oculatus
ENSSLDG00000004516	-	99	62.434	ENSMAMG00000001525	cth1	99	58.667	Mastacembelus_armatus
ENSSLDG00000004516	-	100	63.830	ENSMZEG00005022335	cth1	100	63.253	Maylandia_zebra
ENSSLDG00000004516	-	95	77.170	ENSMMOG00000020518	cth1	100	76.527	Mola_mola
ENSSLDG00000004516	-	100	65.885	ENSMALG00000020738	cth1	69	66.045	Monopterus_albus
ENSSLDG00000004516	-	98	59.502	ENSNBRG00000022789	cth1	87	63.668	Neolamprologus_brichardi
ENSSLDG00000004516	-	100	65.046	ENSONIG00000021318	cth1	100	64.759	Oreochromis_niloticus
ENSSLDG00000004516	-	100	62.349	ENSORLG00000022847	cth1	100	60.241	Oryzias_latipes
ENSSLDG00000004516	-	100	62.349	ENSORLG00020011979	cth1	100	60.843	Oryzias_latipes_hni
ENSSLDG00000004516	-	100	62.651	ENSORLG00015013084	cth1	100	60.241	Oryzias_latipes_hsok
ENSSLDG00000004516	-	100	60.909	ENSOMEG00000005809	cth1	85	58.788	Oryzias_melastigma
ENSSLDG00000004516	-	97	52.553	ENSPKIG00000015883	cth1	78	54.579	Paramormyrops_kingsleyae
ENSSLDG00000004516	-	99	73.414	ENSPMGG00000004275	cth1	100	72.508	Periophthalmus_magnuspinnatus
ENSSLDG00000004516	-	100	64.134	ENSPFOG00000013583	cth1	94	63.526	Poecilia_formosa
ENSSLDG00000004516	-	100	64.134	ENSPLAG00000018158	cth1	94	63.526	Poecilia_latipinna
ENSSLDG00000004516	-	100	64.438	ENSPMEG00000005744	cth1	100	63.830	Poecilia_mexicana
ENSSLDG00000004516	-	99	63.939	ENSPREG00000004099	cth1	100	63.415	Poecilia_reticulata
ENSSLDG00000004516	-	91	61.538	ENSPNYG00000016705	cth1	79	62.308	Pundamilia_nyererei
ENSSLDG00000004516	-	97	58.716	ENSPNAG00000013147	cth1	90	57.282	Pygocentrus_nattereri
ENSSLDG00000004516	-	91	55.627	ENSSFOG00015017190	cth1	79	57.308	Scleropages_formosus
ENSSLDG00000004516	-	100	82.979	ENSSMAG00000007977	cth1	100	81.763	Scophthalmus_maximus
ENSSLDG00000004516	-	100	96.353	ENSSDUG00000004321	cth1	100	96.353	Seriola_dumerili
ENSSLDG00000004516	-	100	76.435	ENSSPAG00000018659	cth1	100	77.204	Stegastes_partitus
ENSSLDG00000004516	-	99	69.091	ENSTRUG00000012770	cth1	99	68.788	Takifugu_rubripes
ENSSLDG00000004516	-	99	67.576	ENSTNIG00000000740	cth1	99	67.273	Tetraodon_nigroviridis
ENSSLDG00000004516	-	82	59.108	ENSXCOG00000003710	cth1	82	57.647	Xiphophorus_couchianus
ENSSLDG00000004516	-	100	64.438	ENSXMAG00000023885	cth1	100	63.526	Xiphophorus_maculatus